Olea europaea var. sylvestris (wild olive): 111410414
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Entry
111410414 CDS
T05244
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03030
DNA replication
oeu03410
Base excision repair
oeu03420
Nucleotide excision repair
oeu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111410414
03410 Base excision repair
111410414
03420 Nucleotide excision repair
111410414
03430 Mismatch repair
111410414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oeu03032
]
111410414
03036 Chromosome and associated proteins [BR:
oeu03036
]
111410414
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111410414
DNA replication proteins [BR:
oeu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111410414
DNA Replication Termination Factors
ELG1-RFC complex
111410414
Chromosome and associated proteins [BR:
oeu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111410414
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111410414
Check point factors
HRAD17(Rad24)-RFC complex
111410414
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
RuvB_N
AAA_lid_RFC1
COMPASS-Shg1
EnY2
AAA_22
Motif
Other DBs
NCBI-GeneID:
111410414
NCBI-ProteinID:
XP_022896497
LinkDB
All DBs
Position
15:complement(20091810..20103547)
Genome browser
AA seq
675 aa
AA seq
DB search
MPSPPIPRSKSAPDINSPPSPSNPYIPSTKSMRSSRSAGSPITAFQKKLGDYIGRKKNSD
LTAQKLEEFNKRLEARYSTSSPYYKGLTDFSLVINREKYSGSSPGRESNATSFISTGSKS
SFAIKVQEWGSSCFTSRKLDKTSSSSGSSSTKSSHNIRAEKIRETDTTITKIRTKTAKDE
SDSDRKKVTFHSINSNDDTITSSNKEKSLRERDSEKPHTPALSYTVSLPYSPPQQIPLQA
ESLPDPIPLPDVLLPGQTPILLPPSAVAQVTDAEMDFLNKKDTNTIENERKYVWASKYRP
SNLQDFLCNRETALRLQTIVRNQQNKAEECGHFIFEGQPGVGKRTMIWAALKEAFGADEI
QAREECKEFNLKGEAVSSIFVNLMVSARHIEVNLSELKGYEKHIIVELIKEKSRESDNAF
QCNEENCKVIILYEADKLSTDTLTYIKWALERFNWCNKVIFCCSDISKLQPLKSLCTLVQ
LLEPSNEEIISVLEFIAKQEGIQLPHQLAVQIANSSKNNLRQAIRSFEATWNFNPSLEED
QDIKTGWEDKIAKLAKNIIEEQSPKQLYNIRGELQNLIEHKVAPEFIFKTLAEELKRNLD
YQLQPKFDKLYDEYQRQHGSKQLMAPAQNQQEKLVKRQNDPRKDVHQFMRIEEFIAKFMS
WYKGLTLKNKEIEST
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtcctccgattccacgttcaaaatcagcccccgatatcaacagtcctccctct
ccctccaacccctacataccttcgaccaagtccatgcgctcttctcgctcagccggctca
ccaatcactgccttccaaaagaaactcggtgactacattggaagaaagaagaactcagac
ctaactgcacagaagctcgaagagttcaataaaagactagaggcaagatattcgaccagc
agtccttattacaagggactaacagacttttccctggtaatcaacagagaaaaatactca
gggtcgagtcctggaagagagagtaatgcaacaagtttcatcagtactggttccaaatcc
agttttgccatcaaggtgcaagaatggggttcgtcttgctttacctccagaaagctcgat
aaaacatcatcatcatctggttcttcttcgaccaagagttcccacaacattcgtgcagaa
aaaatcagagaaacagacacaacgattacaaaaattagaaccaaaacagcaaaagatgaa
tcagactctgacaggaaaaaagttacctttcattccatcaacagcaacgatgatacaatc
acttcatcaaacaaggagaagtcattgagggagagagattcagaaaaaccacatacaccg
gcgctatcatatacagtgtcattaccatattcgccaccacaacaaattcctctacaagca
gagtccttgccagatccaattccattaccagatgtgctcctacctggacaaacaccaatt
ttactcccaccttcagcagtagctcaggttactgatgctgaaatggatttcttaaataag
aaggatacaaatacgatagaaaatgaaagaaaatatgtatgggccagcaaatatcggcct
tctaatctgcaagattttctatgcaatcgggaaacagcactcaggctgcagacgatagtg
agaaatcagcaaaataaagcagaagaatgcggtcatttcatattcgaaggacaaccaggg
gtgggaaagagaaccatgatctgggctgctctaaaagaagcctttggagccgacgaaata
caggcaagagaagaatgcaaggaattcaacttgaagggagaagcagtaagcagcatcttc
gtaaatttgatggtatcagcacgacacatcgaagtgaatctctctgaattgaaaggctat
gaaaaacatatcattgtcgaactaatcaaggagaaaagtagagagtctgataatgctttt
cagtgcaatgaagagaactgtaaagtaatcattctatatgaggcagacaagctatctact
gataccctgacatatatcaagtgggcattagagaggtttaattggtgtaataaggtaata
ttttgctgcagtgacatctccaaactacagcctttaaagtcactttgcacccttgttcaa
ttactagaaccttctaatgaagagattatttcagttttggaattcatagcaaaacaagaa
ggaatacagctaccccatcagttggccgttcagattgctaacagctccaagaataaccta
agacaagccatacgctcatttgaagctacctggaacttcaatccatccttggaggaagat
caggatatcaagactggatgggaagataaaattgcaaaactggcaaaaaacataatagaa
gagcaaagtcccaagcagctttataatatccgtggagaacttcaaaatctaatagagcac
aaagtagctcccgaatttatattcaaaaccctagcagaagaactgaaaaggaatctcgac
taccagttacaaccaaaatttgacaaattatatgatgagtatcagagacaacatgggagt
aagcaacttatggcacctgcacagaatcaacaagagaaactcgttaaaagacaaaatgat
ccaagaaaagatgtccatcaattcatgaggattgaagagtttatagcaaaattcatgagt
tggtacaagggcttaactctaaagaacaaggagattgaatctacttga
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