Olea europaea var. sylvestris (wild olive): 111410453
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Entry
111410453 CDS
T05244
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03082
ATP-dependent chromatin remodeling
oeu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111410453
03083 Polycomb repressive complex
111410453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oeu03036
]
111410453
Chromosome and associated proteins [BR:
oeu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111410453
Histone modification proteins
HAT complexes
HATB complex
111410453
HDAC complexes
Sin3A-HDAC complex
111410453
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111410453
PRC2.2
111410453
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111410453
Heterochromatin formation proteins
Other heterochromatin formation proteins
111410453
Chromatin remodeling factors
NuRD complex
111410453
NuRF complex
111410453
NuRF complex (fruit fly)
111410453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_1st
Beta-prop_SCAP
WD_LRWD1
ANAPC4_WD40
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
NBCH_WD40
MIOS_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
111410453
NCBI-ProteinID:
XP_022896560
LinkDB
All DBs
Position
15:complement(21125547..21129809)
Genome browser
AA seq
424 aa
AA seq
DB search
MGKDEDEIRGEIEERLINEEYKIWKKNTPFLYDLVITQALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSEDEPNYLMLAQVQLPLEDAENDARHYEDDRSDFGGFGCADGKVQIIQ
QINHDGEVNRARYMPQNPFVIATKTVSAEVYVFDYSKHPSKPPVGSACNPDLRLRGHNSE
GYGLSWSQFKHGHLLSGSDDAQICLWDINATPKNKALDAMQIFKIHEGVVEDVAWHLGHE
YLFGSVGDDQYLHIWDLRSPSVSKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISTALHTFDGHKEEVFQVGWNPKNETILASCCLGRRIMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCQDWVVASVAEDNILQIWQMAENIYHDEDDLTGDDS
TKGS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagatgaggatgagattagaggggaaatagaggagcggctgattaatgaggag
tacaaaatttggaagaagaatactccattcctgtacgatctggtaattactcaagctctt
gaatggccgtctcttaccgtcgagtggctgccggaccgggaggagccgccagggaaggat
tactcggtccagaagatgattcttgggactcatacttcggaggacgagcccaattatctc
atgctagctcaggttcagcttcctctcgaggatgctgagaacgacgctagacattacgag
gatgaccgctcagattttggggggtttggctgtgccgacggcaaggtgcaaattatccaa
caaatcaatcatgatggagaggtcaaccgagctcgatatatgccccaaaacccatttgtt
attgccactaaaacagttagtgcagaggtctatgtatttgattatagcaaacatccatct
aagccccctgtaggcagtgcatgtaaccctgatctgaggctgaggggccacaatagtgaa
gggtatggtttgtcctggagtcaattcaagcatggtcatttattgagtggttctgatgat
gcccaaatatgtttgtgggacatcaatgcaactcccaaaaataaggctctagatgcaatg
cagatatttaagattcatgaaggagttgtcgaagatgtagcatggcatcttgggcatgag
tacttgtttggttcagttggggatgatcagtatctgcatatatgggatctccgttctcca
tcagtcagcaagcctattcaatctgtagttgctcatcaaagtgaggtaaactgtttagct
ttcaatccctttaacgagtgggttgtggcaacgggctcaactgacaagactgttaaatta
tttgatcttcgaaagatttctactgcactccacacatttgatggtcacaaggaagaggtt
ttccaggttggatggaatccaaagaatgagaccatattagcttcttgttgtcttgggagg
aggatcatggtgtgggatcttagcaggatcgatgaagaacagacaccggaggatgctgaa
gatggccccccggagttgttatttattcacggtggtcacactagtaaaatttcagacttc
tcatggaacccctgtcaagactgggttgttgctagtgtagctgaggataacatattacaa
atttggcagatggcagagaatatctaccacgatgaagatgatctaactggagatgattct
actaaaggttcttaa
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