Olea europaea var. sylvestris (wild olive): 111410501
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Entry
111410501 CDS
T05244
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111410501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oeu03032
]
111410501
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111410501
DNA replication proteins [BR:
oeu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
111410501
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
111410501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
BRCT_3
RTT107_BRCT_5
TopBP1_BRCT0
RVT_thumb
Motif
Other DBs
NCBI-GeneID:
111410501
NCBI-ProteinID:
XP_022896631
LinkDB
All DBs
Position
15:complement(22488500..22507674)
Genome browser
AA seq
936 aa
AA seq
DB search
MAKVFKGANVFMSRNLVPPELFDALHDALKLNGAQVFLCCDPSRNAPNDYHVIASGDHEK
FVDLRSKGCNLLGPQCLLSCAKEHRSLPNQGFTCCLAMDGVNILVSGFEKDEKVEIEKLV
TAMGGVLQTRASSDVSFVIVKNVLAQKYKWALNNLKKPIVTINWLHQCWKEHRVVPQESY
RVLPFSGLTICVSGIPADERRQMEKLVVQNGGKYSAELTKRCTHLICLTPEGDKYKVAKR
WGHINIIARKWFDQSVLRRACLNEESYPVLASSASSVSTLKTVEQHSQDKSFRNSQHTSS
SMATVSDSEANLSTQPTETNLENPLQHTYSTVLDAPTFTTKENEFPAEQRENDAGFDRCV
ADDSESGDDDLYLSECKILLVGFEASELRKLVDMVRRGGGSRYMSFSEKLTHVVVGNPSE
MEIKEVRSLAAIGVIYVVKPLWLQESCCEKKEIPVLQRHIAYDLLLPKDPVFFNKATATS
MDGMQSGKSSASPCLFADGKIQESVQSGSEVSLEAKLKVQNDSSHGNDSKKSSSVFKRKL
FRFSNSFPEAQRPEIVEWVNQGGGEMVADQNEKNVHFIVERHGVVPCQTDIMSTYVSSHW
VHSCLEAGCLLDVGSHILYSPLPCQIPLPGFEGYRLCVSRYDMKERQLLRNLCFVLGVKF
VEKLTKKVSHLLCKFAGGDKYEAACKWGIQLVTAEWIYECVVQNKVVDPNPFYPKEPSSQ
DQEAGLCNVSQYPSQSFRMISEDDASQFPSESRDIKNMKTVTSTRFVAKEEAKCSSSSKR
ARLLANDSIKHSLSYASTNNNSVHMKNATENNVLESSREFSSAVPDVAAAIEDLLEQTSK
IQDHKSPEASGCSKNTFPSESTRHGQGPADSHSDLEPKHWINRFDEKYDNSAGDAAAKEV
YDGFSETQTESQVVGYEEDLSGRQMIIDRVRTRSMA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggtgttcaagggagcgaatgtgttcatgtcaaggaacctagtgcctccggag
ctcttcgacgcgcttcatgacgcgctgaagctcaacggcgcccaagttttcctctgctgc
gacccctcccgtaatgcccccaacgattatcacgttatcgcctccggtgatcatgagaag
tttgtggatcttcgatctaagggctgtaatttgctcggccctcagtgtctgctgtcttgt
gcaaaagaacacagatcgctgcctaatcagggcttcacttgttgccttgcaatggatggc
gtcaacatacttgtgtctggatttgagaaggatgaaaaggttgaaattgaaaagttggta
actgcaatgggaggagttcttcaaacaagagcatcatcagatgtcagttttgttatagtg
aagaatgttttggctcaaaaatacaagtgggctctaaacaatctaaagaaaccaattgtc
accataaattggcttcaccaatgttggaaggagcaccgtgtagttcctcaagagtcatac
agggttcttcctttttctggattgacaatctgcgttagtggaattcctgctgatgaacga
aggcaaatggagaagcttgttgtgcaaaatggaggcaaatattctgctgaactgaccaag
agatgcacacatttgatttgtcttactcctgaaggtgacaaatataaggttgcaaaaagg
tggggtcatataaatataatagccagaaagtggttcgatcaatctgttttaagaagagca
tgtcttaatgaggagtcttatcctgttctggctagttctgcatcttctgtgagcacttta
aagacagtggaacagcatagccaggacaagagtttcagaaattcgcaacatacatcatca
tctatggctactgtttcagattccgaggcgaatttatctactcagcccacagaaactaat
cttgaaaatcccctgcaacacacatattctacagttttggatgctccaacttttactacc
aaggaaaatgaattccctgctgagcagcgtgaaaatgatgctggtttcgaccgttgtgtg
gctgatgactctgaaagtggggatgatgatttgtacttgtcggagtgcaaaattctgctt
gttggctttgaagcttctgaactgcgtaaactagttgacatggttcgtcgaggtggtggt
tctcgttatatgtccttcagtgaaaagttgacacatgtagtagttggaaacccatcagag
atggaaatcaaggaagtaaggagccttgcagctattggagttatctatgtcgtaaaacct
ttatggcttcaagaaagctgttgtgaaaaaaaagaaattcctgtactccagagacacatt
gcttatgatttgcttcttccaaaagatcctgtattcttcaacaaagcaactgcaactagc
atggatggtatgcaatcagggaagtcctctgcttctccctgcttgtttgcagatggtaag
atccaggaaagtgtgcaatctggatcagaagtgtcattggaagccaagttgaaggtgcaa
aatgattcaagtcatggaaatgactctaaaaagtcatcatctgtattcaaaaggaagctg
tttcgcttttcgaattcttttcctgaagcccaaaggcctgaaattgtcgagtgggttaat
caaggtggaggagagatggtggcagatcaaaatgaaaagaatgtacacttcattgttgag
cgtcatggtgtggtgccttgtcagactgacattatgagtacatatgtctccagtcattgg
gtacattcttgcctagaggctggttgcttgctggatgttggcagtcacattctctattct
ccacttccatgccaaattcctttgccaggttttgaaggatatcgcctttgtgtttcacgg
tatgatatgaaagagagacagctgctgagaaatttgtgctttgttcttggagtcaaattt
gttgaaaaactgaccaaaaaagtaagccatctattgtgtaaatttgctggtggtgataaa
tatgaggctgcttgtaaatggggaatacagttagtcacggctgagtggatatacgaatgt
gttgtacagaacaaagtcgtcgatccaaatccattttatccaaaagaaccatcttctcaa
gaccaggaagcgggtttatgtaatgtgagccagtatcctagccaatcttttaggatgata
tctgaagatgatgcttcccagtttcccagtgagtcccgagatataaaaaatatgaaaact
gttacttctaccagatttgtggcaaaggaagaggccaagtgttcaagtagtagtaaaagg
gcaagacttttggcaaatgatagtataaaacattctctatcttatgcctccactaataat
aattctgtccatatgaaaaatgccacagaaaacaatgtattagaaagttctagggaattt
tcttctgcagttcctgatgtcgccgcagctatagaggatttgttggagcaaacgagtaag
attcaagatcataagtctccagaagcaagtggttgcagtaaaaatactttcccttctgaa
tctacgaggcatggtcaaggtcctgcagattcccactctgatctagagcccaagcattgg
ataaacaggtttgatgaaaaatatgataattccgccggagatgcagcagctaaggaagtt
tatgatggtttcagtgaaacacaaactgaatctcaggttgttggttatgaagaagatttg
tctggtaggcaaatgattattgatcgagtgcgaacgaggagcatggcatga
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