Olea europaea var. sylvestris (wild olive): 111410589
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Entry
111410589 CDS
T05244
Name
(RefSeq) cleavage stimulation factor subunit 77
KO
K14408
cleavage stimulation factor subunit 3
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111410589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111410589
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111410589
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Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
PRP6_TPR
TPR_15
TPR_2
TPR_YpiA
TPR_16
CFAP70_mid_TPR
TPR_CcmH_CycH
Iml2-TPR_39
FTCD_C
Motif
Other DBs
NCBI-GeneID:
111410589
NCBI-ProteinID:
XP_022896776
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Position
15:complement(24668262..24682339)
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AA seq
760 aa
AA seq
DB search
MANDPSESQSQFPSDLNGGKTMADEYNVDTAEKLANEAMRMPITEAMPIYEQLLATFPTA
ARYWKQYVEAFMAINNDDATRQIFSRCLLNCLQVPLWRCYIRFIRKVNDKKGIEGQEETK
KAFDFMLNYVGEDIASGPVWIEYITFLKTMPAQTTLEESQRMTAIRKAYQRAIVTPTHHV
EQLWKDYENFENSVSRALAKGLLSEYQQKYNSARAVYRERKKYVDEIDWNMLAVPPSGSS
KEEMQWMAWKKLLSFERGNPQRIDNVSANKRIAFAYEQCLMYLYHYPDIWYDYATWHAKS
GSIDPAIKVFQRALKALPDSEMLKYAYAELEESRGTIQAAKKVYESLIGDGVDATALSHI
QFIRFLRRTEGVEAARKCFLDARKSPNCTYHVYVAYAMMAFCLDKDAKLAHNIFEAGLKR
FMHEPGYILEYADFLSRLNDDRNIRALFERALSSLPPNESVEVWKRFSQFEQTYGDLASM
LKVEQRRKEALSRTGEDGASALENSLHDVVSRYSFMDLWPCSSMDLDHLARQEWLSRNIN
KKIENPAPANGAGSADRSISVVPNISNLFGKVVFPDTSRMVIYDPRQKPGPPASGPTSVS
STFPYGVTSSFGGTTNALNDMVKALPPALAAFVANLPAVEGPCPDVDFVLSICLQTNIPS
ATGKSPQQLQVGPVPSSSDLSGSSKFKQTRDRQPGKRKSLERQDDDDTTTVQSQPLPRDA
FKLRQLQKARGSSSRAGGGGSAASASYGSGFSGDFSGSSG
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgacccttcagaatctcaatctcaatttccttccgatctgaatggagggaaa
actatggccgacgagtacaacgtcgatactgcagaaaaactcgcaaatgaggcaatgcgt
atgccgatcacagaggcgatgccaatatacgaacaactccttgccacattccccactgca
gcaagatactggaagcagtatgttgaagcattcatggctataaacaatgatgatgcaaca
agacaaatatttagccgctgcttgttgaattgtttacaagttcctctttggcgatgttac
atccgtttcattaggaaagtaaatgataagaaaggaatagagggtcaggaggagactaag
aaagcttttgatttcatgcttaactatgttggtgaggacattgcatctggtcctgtgtgg
attgagtatattacatttttgaaaactatgccggcccaaaccacactagaagagtcacaa
agaatgacggccattcggaaggcataccaaagggccatcgttactcccacccatcacgtt
gaacaactttggaaggactatgaaaattttgagaattcggttagccgtgctctggcgaaa
ggactgttgtctgaatatcaacaaaaatataatagtgcgagggctgtttatagggagcgt
aagaagtatgtcgatgaaattgattggaatatgcttgctgttcccccctctggttcttct
aaggaagaaatgcaatggatggcttggaaaaagttgttatcatttgagagaggaaaccct
cagagaattgacaatgtttctgcaaataagcgaattgcatttgcttatgagcagtgcctc
atgtatttatatcattaccctgatatatggtatgactatgctacgtggcacgcaaaaagt
ggttccatagaccctgcaatcaaagttttccagcgagcattgaaggctcttcctgattca
gaaatgctaaaatacgcttatgcagagcttgaagaatcacgaggaactattcaggctgca
aagaaagtatatgaaagtcttataggggatggagttgatgcaacagcactgtcacatatc
cagttcatacggtttctaagaagaactgagggagttgaagcagctcgcaaatgctttcta
gatgcccgcaagtctccaaattgcacttaccatgtttatgttgcatatgcaatgatggcc
ttttgtcttgataaggatgcaaagcttgcgcataatatttttgaagctgggttgaaacgc
tttatgcatgagcctggttacattctagaatatgcagatttcttgtcccgtttgaatgat
gatagaaacatccgggctttgtttgaacgagcattgagctcacttccacccaatgaatcc
gttgaggtttggaaaagattttctcaatttgagcagacgtatggagatcttgccagcatg
ttgaaggttgaacaaaggaggaaagaagctttatctcgaacgggggaggatggagcatct
gctttggagaattcactgcatgatgttgtatcacgctatagttttatggatctgtggcct
tgctcgtctatggacttggatcatttggcccgacaagagtggctctcaagaaacatcaat
aagaagattgaaaatcctgcacctgctaatggagctggttctgctgataggagcatttca
gtagttccaaatatttcgaatctctttggaaaagttgtttttccagatacatccaggatg
gtaatttatgatccaaggcaaaagcctggtcctcctgcctctggaccaaccagtgtttca
agtacctttccttatggtgttacatcaagttttggtggaacaacgaatgcactcaatgat
atggtgaaagccttaccaccagcattggcagcctttgtggcgaatttgccagctgttgag
ggtccttgccctgatgttgattttgtattatccatatgtttgcaaaccaacataccttcg
gcaactgggaaatcacctcagcagttacaggtcgggcctgtcccaagttccagcgacctt
tctggttcaagcaaatttaaacaaacaagagacagacagccgggaaagaggaaatcttta
gagaggcaagatgacgatgacactaccactgtccagagccagccattacctagagatgct
tttaagttacgccagttacaaaaggctcgtggtagtagttcacgtgcaggtggtggtggt
tctgctgcttctgcatcatatgggagtgggttctctggcgatttctctggaagttctggt
tga
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