Olea europaea var. sylvestris (wild olive): 111412999
Help
Entry
111412999 CDS
T05244
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
111412999
03036 Chromosome and associated proteins [BR:
oeu03036
]
111412999
Transcription machinery [BR:
oeu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111412999
Chromosome and associated proteins [BR:
oeu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111412999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
Spt6_S1
HHH_9
Tex_central_region
HHH_3
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
111412999
NCBI-ProteinID:
XP_022899646
LinkDB
All DBs
Position
17:complement(13899336..13908762)
Genome browser
AA seq
1611 aa
AA seq
DB search
MAGKTVISDDEDEVEVYEEERDNEPDGDRVQGRDDDDEEDEEDEEGQDEYEKDGFIVDDV
EDEEEVEEEDRADSGEERQKKKKRKKRESEYMLDEDDYELLQESNISVPRPKLESKKFKR
LKKARRDTEEDTSGFSDEEEFDGSGKGGRSAEEKLKRSLFGDDDGQPLEDIAEEDEQLEE
EDADIGEEDEMADFIVDEEEVDEHGAPVRRKRPKKTRQTPGISSSALQEAHDIFGDVDDL
LKLRKRSLAIRGRHEDYGEWKERRLEDEFEPVILSEKYMTEKDDRIREIDIPERMQISEE
STGPPPTDELSIAEERDWIYSQLVYGAVPLFNKRGTTTEELNELSVIKDDIARFLELMHV
QKLDVPFIAMYRKEEILSLLKDPDQPETDIESLNDPNQKPRLRWHKVLWTILDLDKKWLL
LQKRKSALEIYYNKRFEEESRRVYDETRLNLNRQLFESITKSLKAADSEREVDDVDSKFN
LHFPAGEAGADEGQFKRPKRKSQYSICSKAGLWEVANKFGYSSEQFGLQISLEKMRMDEL
EDAKETPEEMASNFTCAMFETPQAVLRGARHMAAVEISCEPCVRKHVRSIFMENAVVSTS
PTPDGTVVIDSFHQFAGVKWLRDKPLTRFEDAQWLLIQKAEEEKLLKVTIKLPEPILDKL
ISDSNDYYLSDGVSKSAQLWNEQRKLILQDAFSNFLLPSMKKEARSLLTSRAKNWLLWDY
GKLLWDKVSVSPYQRKENDANSDEEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYAG
SLSLRGQNVNDQQRKKNDQQRVQKFMMDHQPHVVVLGAVNLSCTRLKEDIYEIIFKMVED
NPRDVGHEMDNLNIVYGDESLPHLYENSRISTDQLPGQAGIVRRAVALGRNLQNPLAMVA
TLCGPGREILSWKLNPLESFLTPDEKYGMVEEVLVDVTNQVGLDINLAASHEWLFAPLQF
IAGLGPRKAASLQRSLVRAGAIFTRKDLLTAHGLGKKVFVNAVGFLRVRRSGLTSSSSQF
IDLLDDTRIHPESYGLAQELAKDIYREDGNDDANDDEDVLEMAIEHVREKPNLLRSVDVH
EYAEQKNRLNKKETLNDIRLELMEGFQDWRRPYVEPTQDDEFYMISGETEETLSEGKIVQ
ATVRRVQAQKATCVLESGLTGLLNKEDYTDDWKDINELTDKLREGDILSCRIKSIQKNRY
QVFLTCKESDMRSSRFQNHRNMDPYYHEERSGLESQQEKARKEKELAKKHFKPRMIVHPR
FQNITANEAMELLSDKEPGESVVRPSSRGPSFLTLTLKIYNDVYAHKDIVEGGKEHKDIT
SLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLNYRKFKKGNKAEVDELLRIEKS
EYPMRIVYCFGISHEHPGTFILTYIRSSNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQ
RHIDDPHESPSIRSVAAMVPMRSPATGDSSGFGSGWSGSGNDGGRRGSQSSDRDRTPGSR
TGRGDYRNGGDQDGHPSGAPRPYGGRGRGRGRGRGGRGNERQDTDRGSQKWGSKDGDDAG
GWGSFPGAKVQNSPGREAFPGSWGGSASDDAAETGGGNSGWGGSKKSSGGW
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaaaacggtgatctccgacgacgaagatgaggttgaagtgtacgaagaagag
agagataatgaacctgatggagaccgagtccagggccgcgatgacgatgatgaggaagat
gaagaagatgaagaagggcaggatgaatatgaaaaagatgggtttatagtggatgatgtc
gaggacgaagaggaagtggaggaagaagatagagctgacagtggcgaggagaggcagaag
aagaagaaaaggaagaaaagagagtcagaatatatgctcgacgaggatgactacgagctt
cttcaggaaagcaatatctctgttcctcgtccaaaacttgagagcaagaagtttaagcga
ctgaaaaaagctcggagggatacagaggaagacacctctgggttttctgatgaagaggag
tttgatggaagtggaaaaggaggacgatcagcagaggagaagcttaaacgcagcttgttt
ggtgatgatgatggacaaccgctcgaggatattgctgaggaggatgaacagcttgaagaa
gaggatgcagacattggggaagaggatgaaatggctgatttcattgttgatgaagaagaa
gttgatgaacatggagctccagtcagaaggaagaggcccaaaaagactaggcaaacccct
gggatctcatcatcagctctgcaggaagcgcatgacatatttggtgatgtcgatgacctt
ctgaagcttcgcaagagaagtttagcaattaggggaaggcatgaagattatggtgaatgg
aaggaaaggaggcttgaagatgaatttgaacctgttattctctctgaaaagtatatgact
gaaaaggatgaccggattcgggaaatagacatccccgaaagaatgcagatttccgaggaa
agtactggtcctccacctacagatgagttgagtatagcagaggagagagactggatatat
agtcagctcgtctatggtgctgtgcctctgtttaacaagaggggcacaaccaccgaggag
ctgaatgaactatcagtaatcaaggatgacattgcgagatttctggaattaatgcatgta
cagaagttagatgttccctttattgctatgtaccggaaggaggagattttgagcctatta
aaggatccagatcagccagaaactgacattgagagcctaaatgatcctaaccaaaaacct
agactaaggtggcacaaggttctttggacaatcctggacttggataaaaagtggcttctt
cttcagaaacggaagagtgcccttgagatatactacaacaagcgctttgaggaagagtca
cgcagagtatatgatgagacacggcttaatttgaacaggcagctttttgagtcaattaca
aagtcacttaaggcagctgattcagaaagagaggttgacgatgttgattcaaaatttaac
ttgcatttccctgcgggtgaggctggtgcagatgaagggcagttcaagaggccaaagagg
aaatcacagtacagcatttgcagtaaggctggcttatgggaggttgcgaacaagtttggc
tatagctctgagcagttcgggttgcagatatctctggaaaaaatgagaatggatgaattg
gaggatgctaaggaaacaccagaagaaatggcttccaatttcacttgtgcgatgtttgag
actccccaggctgtgcttagaggtgctagacacatggctgctgttgagattagctgtgaa
ccatgtgtacgcaaacatgttcgtagtatctttatggaaaatgctgtggtgtcaacaagc
cctacacctgatggaactgttgtaattgattctttccaccagtttgctggagtgaagtgg
ttgcgggacaagccacttactagatttgaggatgctcagtggcttctaattcaaaaggct
gaagaggagaagcttctgaaagttaccattaagctaccagaacctatccttgataagtta
ataagtgactctaacgattattatctgagtgatggtgtgagtaaatctgctcaactgtgg
aatgagcagaggaaactgatccttcaagatgcgttttctaattttcttttaccttcaatg
aagaaggaagcaagatccctattgactagtagagcaaaaaactggttgctttgggattat
ggaaagcttttgtgggacaaagtttctgtttcaccatatcaacgaaaagaaaatgatgct
aattctgacgaggaagctgcaccccgggttatggcttgttgttggggcccgggaaagcca
gcaacaacttttgtgatgttggattcatctggagaagttttggatgttctatatgcagga
tccctcagccttcgtggtcaaaatgttaatgatcagcaacgtaagaaaaatgatcagcag
cgggttcagaagtttatgatggaccaccaaccacatgttgttgtacttggagctgtgaat
ttgtcttgtacaaggctgaaggaggatatttatgagatcatcttcaagatggtggaggat
aatcctagagatgttggtcacgagatggataatctgaacattgtatatggtgatgagtct
cttccgcatctgtatgaaaattcccgcatctcaacagatcagcttcctggacaagcaggt
attgtcaggcgagctgtggctcttgggcgcaatcttcagaatccactagcaatggttgct
acattatgtggaccaggaagggagatattatcctggaaacttaatcctttggagagcttt
cttactcctgatgagaaatatgggatggtggaagaagttttggttgatgtaaccaaccaa
gtgggtcttgatatcaatttggctgctagtcatgaatggttgtttgctcctctgcagttc
attgctgggcttggtcctagaaaggcggcatctttgcagaggtctttggtaagagcagga
gcaatttttactagaaaagacctactgacagctcatggtctcggtaaaaaggtgtttgtt
aatgcagttggattcctgcgagtccgacgcagtggattgacttctagcagtagtcaattt
attgatctgttagatgacacaaggatacatccagagtcctatggtcttgcgcaagagttg
gccaaagatatttatagggaggatggcaacgatgatgcaaatgatgatgaggatgtgctt
gaaatggccattgaacatgtgagagaaaagcctaatttattgaggtcagttgatgtccac
gaatatgctgaacagaagaaccgcctgaacaaaaaagaaacccttaatgatataagattg
gagttgatggaaggctttcaagattggcgcagaccatatgtagaaccaactcaagatgat
gaattttacatgatttctggggaaacagaagaaacattgtctgaaggaaaaattgtgcaa
gcaacagttcgcagggttcaagcacaaaaagccacttgtgtccttgaatctggattgaca
ggcttgctcaataaggaagactacactgatgattggaaggatattaatgagctgactgat
aagttgcgtgaaggcgatattttaagttgcagaatcaaatcaattcagaaaaatcgatat
caggtgtttttaacatgtaaagagagtgatatgagaagcagccgcttccagaatcatcga
aacatggatccctactatcatgaagagcgcagcggcttagagagtcagcaggagaaagct
cgtaaagagaaggagcttgctaagaagcattttaagcccaggatgattgttcatcctcgt
tttcaaaatattacggccaatgaagcaatggagttactgtctgacaaggagcctggcgaa
agtgttgtccgtcctagttctcggggaccttcatttttgactttaactcttaaaatttat
aatgatgtttatgctcacaaggacattgttgagggcggaaaggaacacaaggatatcaca
agcttgcttcgaatagggaagacgctgaaaattggagaggatacgtttgaggatttagat
gaggtaatggatcgttatgtggatccattggtatcccatttgaaggcaatgctaaactat
cgcaagttcaagaagggaaataaagcagaagttgatgagctcctaaggattgagaaatct
gagtacccaatgaggatcgtgtattgctttgggatatcccatgaacatcctggcacattc
atactgacttatatacgtagttcaaatccacatcatgagtacataggtctgtatccaaag
ggatttaagttccgaaaaaggatgtttgaggacattgatcgtcttgtggcatattttcag
agacacatagatgatccacatgagtcaccatcaattcgatcagttgctgctatggtgcca
atgagaagtcctgcaaccggggactcatcagggtttggcagtgggtggagtggttcaggc
aatgatggtggacggagaggaagccagtcttcagacagagatagaactccgggttctaga
acaggtagaggtgattatagaaatggtggcgaccaggacgggcatccaagtggagcaccc
agaccatatggtgggcgcggacgtggacgtgggcgtggtcgaggtggcagaggcaacgag
aggcaggatacagaccgtggctcacaaaagtggggttctaaggatggtgatgatgctggt
ggatggggtagttttcctggagcaaaagttcagaattcaccaggtcgggaagctttccct
ggtagctggggtggcagcgcttcagatgatgctgcggagacaggtggtggaaattctgga
tggggtggcagcaaaaagagttccggcggctggtga
DBGET
integrated database retrieval system
