Ornithinimicrobium faecis: NF556_05190
Help
Entry
NF556_05190 CDS
T10132
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ofa Ornithinimicrobium faecis
Pathway
ofa03420
Nucleotide excision repair
ofa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ofa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NF556_05190
03430 Mismatch repair
NF556_05190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ofa03400
]
NF556_05190
Enzymes [BR:
ofa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NF556_05190
DNA repair and recombination proteins [BR:
ofa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NF556_05190
MMR (mismatch excision repair)
Other MMR factors
NF556_05190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
USQ81044
LinkDB
All DBs
Position
1107650..1110871
Genome browser
AA seq
1073 aa
AA seq
DB search
MIGALEIASALGQLPPTQEQVAVIEAPLEPTLVVAGAGSGKTETMASRVVWLVVNGVARP
EEVLGLTFTRKAAIELGERIGRRLRAATEQGLWTAEDDEVPLPEVSTYHAYAGRLVSEHG
LRWGIEPDSRLLSEASAWQLAHEVVHTTDADLAGFEKAPATLVDAVLSLSGELAEHLVET
RSARELVEHYAARLAAMPGRDHKKPLKLAAETADDLLDQARVYPLVERYRELKRARGTLD
FADQMAIAARLAATLPAVGAQERQLRKAVLLDEFQDTSEAQMVLLSSLFAGEQMPLTAVG
DPSQSIYGWRGASATTLSSFPEIFPAGDRPAAVLPLSTSWRNAQRILTVANDASSSLRRR
SRVPVTQLQPRPGADTGTVRAARLLTHRDEAGYVAEWVRGHWIGADGEPTGRTAAVLCRN
RAQFDEVVQALRGQGLPVEIVGLGGLLSAPEVADLVALLTVAQDPTRGDALMRLLTGPVC
RLGAADLDGLWAWVGALAHSDGLPRSEAVLSDALDRLPPVTWAGSRGRRVSETARARVRA
LGQAVDRVRSLAGLPLPELLVEAERAIGLDLEVTSNPDLPPAWGRAQLDALAEVAAGFSV
SAERPTLGGFVDWLEAARERERGLEMAEVSVSDSAVQVLTVHAAKGLEWDVVAVPGLAEG
IFPSYTTRTRPNGSEWSASTPKDRGWLTGLGKLPYPLRGDVAGLPALPLDSVVDTHELKE
AVEDFGLAGGRHQVDEERRLAYVAFTRARHDLMVTAPVWSTGQTPRQTSRFLEEVIASPD
GGVEVAHWAPMPDPDDPTQVVNPLLAEEQLAPWPTVPDARRRLVTDVVQAVLDARRAGAV
PAADPDDPVGLEVTRLLRERAELRAAREVAGHAQLPEHLSTSGLVELTADKEAYLRALRR
PVPGPPAHAARAGTSFHAWVERHFGMPSLVEVEGLQADSDHELVDLSTMRANFLASEWAG
QSPVEIEVPVETVLGGRAVRGRIDAVFGHGDGFVVVDWKTGARGGGERERTRVLQLAVYR
VAYARLRGIDPERVSAAFFYAATGETVRPDLHSEQELEDLLAGLADAAPVLRP
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgatcggggcactggagatcgcttcggcgctgggtcagttgccgccgacgcaggagcag
gttgcggtcatcgaggcaccgctggagccgaccctggtcgtcgcgggtgccggatcgggc
aagaccgagacgatggcctcccgcgtggtctggctcgtggtcaacggtgtcgctcggccc
gaggaggtgctcgggctcaccttcacccgcaaggcagccatcgagctcggcgagcggatc
gggcgtcgactgcgagccgcgaccgagcagggtctgtggacggccgaagacgacgaggtg
cccctgccggaggtctcgacctaccacgcgtatgccggacggctggtttccgagcacggg
ctgcggtgggggatcgagccagactcgcgcctgctgtccgaggcgtccgcctggcagctg
gcccacgaggtggtgcacaccaccgatgcagacctggccggcttcgagaaggcgcccgcc
accctggtggacgccgtcctgtcgctgtcgggggaactggccgagcatctggtcgagacc
cggtcggcgcgcgagctcgtcgagcactatgccgcccgcctcgcagcgatgcccggcagg
gaccacaagaagccactgaagctggcggcggagacggccgacgacctgctcgatcaggcg
agggtctatccactggtcgagcgctaccgtgagctcaagagagcccgggggacgctggac
ttcgccgaccagatggcgatcgccgcacgcctggcagcaacgctcccggctgtcggcgca
caggagcgccagctgcgcaaggccgtgctgctggatgagtttcaggacaccagcgaggcc
cagatggtgctgctgtccagcctgttcgctggggagcagatgccgctgacggcggtgggc
gacccgagccagtcgatctatggctggagaggcgccagcgcgacgacgttgagcagtttt
ccggagatcttccctgccggggatcgccctgccgcagtcctgccgctgtcgacctcctgg
cgcaacgcgcagcggatcctcaccgtggccaacgacgcctccagctcgctccgccggcgc
agcagggtgcccgtgacccagttgcagcctcgacccggtgccgacaccggcacggtgcgt
gccgcccgactcctcacgcaccgcgacgaggccggctatgtcgccgagtgggtgcgaggc
cactggatcggtgccgacggagagcccacggggcgcaccgccgccgtcctgtgccgcaac
cgtgcccagttcgatgaggtcgtgcaggcgctgcgaggtcaggggctccccgtcgagatc
gtcggcctcggcgggctgctcagcgcccccgaggtggctgacctggtggctctgctcacc
gtggcacaggacccgaccaggggcgatgccctgatgcgcctgctcaccgggcccgtgtgc
cgactcggggccgccgacctcgatggattgtgggcctgggttggtgccctggcccacagt
gatgggctcccacgcagcgaggccgtcctcagcgatgctctggatcgcctgccaccggtc
acctgggccgggtcgcgggggcgccgggtgagtgagactgcacgggcacgggtgcgggcg
ttggggcaggccgtcgaccgcgtccgctccctcgctggcctgccgctgcctgagctgctg
gtggaggcggagcgggcgatcggtctcgatctggaggtcacctccaaccccgacctgcca
ccggcctggggccgggcacagctcgacgccctggccgaggtggcagctggcttctcggtg
agcgccgagcggcccacgctcggcggcttcgtggactggctggaggcggcgcgcgagcgg
gagcgtgggctggagatggccgaggtctcggtgtcggactcggcggtccaggtcctcacg
gtccacgcagccaaggggctggagtgggacgtcgtcgctgttcctgggctggccgagggg
atcttcccgtcctacacaaccaggacccggcccaacggcagcgagtggagcgcctcgaca
cccaaggacaggggctggctcaccgggctgggcaagctgccctatccgctccggggcgac
gtggcaggattgccggctctccccctggactctgtggtggacacgcacgagctcaaggag
gccgtggaggactttggcctggccggtggccgccaccaggtggacgaggaacgtcgcttg
gcgtatgtcgccttcaccagggcacggcacgacctcatggtgaccgcgcccgtctggtcg
accggacagacacctcgacagacatctcgcttcctcgaggaggtgattgcctcacccgat
ggaggggtggaggtcgcccactgggcgcccatgccggacccggacgacccgacccaggtg
gtcaacccactgctcgccgaggaacagctggcgccgtggccgacagtgcctgacgcccgc
cgccgactggtcaccgacgttgtgcaggccgtcctggacgctcgccgagcaggagccgtg
ccagccgcggatccggacgatccggttggactcgaggtcactcggctgctgcgcgagcgc
gccgagttgcgagcagcccgcgaggtcgcagggcacgcccagctccccgagcacctgtcc
acctcgggcctggtcgagctcaccgcagacaaggaggcctatctgcgggccctgcgcaga
cccgtcccgggtccccccgcccacgcggcccgggcgggcaccagcttccacgcctgggtt
gagcggcacttcggcatgccgtcgctggtcgaggtggagggcctgcaggccgactccgat
cacgagctggtcgacctgtcgaccatgcgcgccaacttcctggccagcgagtgggcgggg
cagtcgccggtcgagatcgaggtcccggtcgagaccgtgctcggtggccgtgccgtccga
ggtcggatcgacgcggttttcggccacggcgacggattcgtcgtcgtcgactggaagacg
ggagcgcgcggcgggggagagcgggagcgcacccgcgtgttgcagctcgccgtctatcgc
gtggcctatgcccgcctgcgggggatcgaccccgagcgcgtgagcgctgcgttcttctat
gcggcgaccggcgagaccgtgcgtcctgacctgcactcggagcaggagcttgaggacctg
ctggcggggctggccgacgctgcccccgtgctcaggccgtag
DBGET
integrated database retrieval system
