Ornithinimicrobium faecis: NF556_07840
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Entry
NF556_07840 CDS
T10132
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ofa Ornithinimicrobium faecis
Pathway
ofa03030
DNA replication
ofa03430
Mismatch repair
ofa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ofa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NF556_07840 (dnaE)
03430 Mismatch repair
NF556_07840 (dnaE)
03440 Homologous recombination
NF556_07840 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ofa03032
]
NF556_07840 (dnaE)
03400 DNA repair and recombination proteins [BR:
ofa03400
]
NF556_07840 (dnaE)
Enzymes [BR:
ofa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NF556_07840 (dnaE)
DNA replication proteins [BR:
ofa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NF556_07840 (dnaE)
DNA repair and recombination proteins [BR:
ofa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NF556_07840 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF2200
OB_MCM10
RNA_pol_I_A49
Motif
Other DBs
NCBI-ProteinID:
USQ81545
UniProt:
A0ABY4YZ53
LinkDB
All DBs
Position
1699973..1703542
Genome browser
AA seq
1189 aa
AA seq
DB search
MSTAPSSAGNFVHLHNHTEYSMLDGAARITDMFDRAAELEMPAIATTDHGYIFGAHEFWS
AGQKAGVKPIIGLEAYVTPGTHRTDRSRVKYGDGGRDDVSGSGAYTHMTMWARNNNGLHN
LFRMASLASLEGYYFKPRMDRELLETYGQGIIATTGCPSGEIQTRLRFGQYDEARQYAAD
MQDIFGKENYFLELMDHGLDIERRTRQDLLRLAKDVGLPIVATNDLHYTHKEDAKAHSAL
LCIQTAATLQDPNRFQFGGDGYYLKTAEEMRDVWRELPEACDNTLLIAERCEVSFTEGEG
RFMPRFPVPEGEDETSWFVKEVETGLHKRFPEGIPDYARKQAEYETGVILGKGYPGYFLV
VADFINWAKSQKIRVGPGRGSGAGSMCAYAMGITDLDPIPHGLIFERFLNPERMSMPDFD
VDFDDRRRSEVIHYVTEKYGDERVAMIATYGTLKAKAALKDAARVMGFPFAMGEKLTKAM
PPAVMGKDIPLSGIFDTEHPRYGEAGEFRELLQTDQEAAQVFETATGLEGLKRQWGVHAA
GVIMSSEPLIDVIPIMRREQDGQVITQFDYPTCERLGLVKMDFLGLRNLTVLDDAIANIK
LNRGEDIDLDVLSKDMTDTKAYELLGRGDTLGVFQLDGSGMRQLLRLMQPDNFEDISAAL
ALYRPGPMGVNAHTNFALRKNDKQEVVPLDPQLKGKLQPEMVEALEPILGNTYGLCIYQE
QVMEIAQKLAGYTLGNADLLRRAMGKKKKEVLDAEYIPFSDGMKANGYNEASVAALWGVL
VPFSDYAFNKAHTAAYGVISYWTAYLKANYPAEYMAALLTSVRDDKDKTALYLNECRRMG
IAVLPPDVNESIANFAAVGKDIRFGLAAIRNVGTNVVDAVVVTRDQKGKFSSFEDFLRKC
PAVVCQKRTIESLIKGGAFDELKHPRQGLVTVHERYVDALAEEKKQEAIGQDSLFGGFGG
EEPDVQIVTLPPVPDIEWEKQIKLAFEREYLGLYVSDHPLNGIEHILTANATATIGQVVS
EDGPQDGEFVTVAGLMTSVQLKRTKNGDPYARVQLEDLVGSIECVFFPKSYMTVSTMLAP
DTVAVIRGRFKRSEDTTEILAQDLTIPEIKEGPRGPVLLTMPLTRATDGLANKLRNVLSQ
HPGSTEVHVKLTQPGRQVLLRLDPTLRVTASPEFFGDIKALLGPAAVGS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgcacccagctccgccggcaactttgtccacctgcacaaccacaccgagtac
tcgatgctcgacggtgctgcccgaatcaccgacatgttcgaccgggccgcagagctggag
atgcccgccatcgccacgaccgaccacggctacatctttggcgcccacgagttctggagc
gcggggcagaaggcgggggtcaagccgatcatcggcctggaggcctacgtcacgccgggg
acgcaccgcacggaccgctcgagggtcaagtacggcgatggtggccgtgacgacgtgtcc
ggctcgggtgcctacacccacatgacgatgtgggcccgcaacaacaacgggctgcacaac
ctcttccgcatggcctcgctggcgtctctcgagggctactacttcaagccgcgcatggac
cgggagctgctggagacctatgggcaggggatcatcgccacgaccggctgcccgtccggt
gagatccagacccggctgcggttcgggcaatacgatgaggcgcgccagtatgccgcggac
atgcaggacatcttcggcaaggagaactacttcctggagctgatggaccacgggctcgac
atcgagcggcgcacccggcaggacctgctgaggctggccaaggacgtgggcctgccgatc
gtggccaccaacgacctgcactacacgcacaaggaggatgccaaggcgcacagcgcgctg
ctgtgcatccagaccgcggcgacgttgcaggaccccaaccgttttcagttcggcggcgac
ggctattacctcaagaccgccgaggagatgcgtgacgtctggcgcgagctgcctgaggcg
tgcgacaacaccctgctgatcgctgagcgctgtgaggtctccttcaccgagggcgagggg
cgcttcatgccgcgcttcccggtgccggagggggaggacgagacgtcctggttcgtcaag
gaggtcgagaccgggctgcacaagcgcttcccggagggcatcccggactatgcccgcaag
caggcggagtatgagacgggcgtcatcctcggcaagggctacccgggctacttcctggtc
gtcgccgacttcatcaattgggccaagagccagaagatccgggtcggaccgggccgtggc
tccggtgccggctcgatgtgtgcctacgcgatgggcatcaccgacctggacccgatcccg
cacgggctgatcttcgagcggttcctcaaccccgagcgcatgtcgatgcccgactttgac
gtcgacttcgatgaccggcgccgctccgaggtgatccactacgtcaccgagaagtatggc
gacgagcgggtcgccatgatcgcgacctacggcacgctgaaggccaaggcggcactcaag
gacgccgcccgggtgatgggcttcccgtttgcgatgggggagaagctcaccaaggcgatg
cctccggccgtgatgggcaaggacatcccgctgtccgggatcttcgacacggagcacccg
cgctatggcgaggctggcgagttccgcgagctgctgcagaccgaccaggaggccgcgcag
gtcttcgagaccgcgacgggcctggaggggttgaagcggcagtggggcgtgcacgcggcc
ggcgtcatcatgtccagcgagccgctgatcgacgtcatcccgatcatgcgccgcgagcag
gacggccaggtcatcacccagttcgactatccgacgtgtgagcgcctcgggctggtcaag
atggacttcctgggcctgcgcaacctgacggtgctggacgatgcgatcgccaacatcaag
ctcaaccgcggcgaggacatcgacctggacgtcctgtccaaggacatgaccgacaccaag
gcctacgagctgctgggccgcggtgacactcttggcgtgttccagctggacggctccggc
atgcgccaactgctgcgtctcatgcagcccgacaacttcgaggacatctccgcggccctc
gcgctctatcgccccggccccatgggcgtgaacgcgcacaccaacttcgccctgcgcaag
aacgacaagcaggaagttgtcccgctcgacccgcagctgaagggcaagctgcagccagag
atggtcgaggcgctcgaacccattcttgggaatacatacggtttgtgtatttatcaagag
caggtcatggagattgcccagaaactcgcgggctacacgctgggcaatgcagatctgctc
cgacgcgcgatgggcaagaagaagaaggaggtgctcgacgccgaatacattcctttctct
gacggcatgaaggccaatggttataacgaggcctccgttgcagcgctgtggggcgtgctg
gtgccgttctccgactatgcgttcaacaaggcgcacaccgcggcctacggcgtcatttcc
tactggacggcttacctcaaggccaactacccggccgaatacatggcggcgctgctgacc
agtgtccgggacgacaaggacaagacggcgctctatctcaacgagtgccggcgcatgggc
atcgcggtgctgccgcccgacgtcaacgagtcgatcgccaacttcgccgccgtcggcaag
gacatccgcttcgggctggccgcgatccgcaatgtcggcaccaacgtcgtcgacgccgtc
gtggtcacccgcgatcagaagggcaagttcagctcctttgaggacttcctgcgcaagtgc
ccggccgtggtctgccagaagcgcaccatcgagtcgctgatcaagggcggggccttcgac
gagctcaagcacccgcggcagggcttggtcaccgtgcacgagcgttatgtcgacgctctc
gccgaggagaagaagcaggaggccatcggccaggacagcctcttcggcgggtttggtggc
gaggagcccgacgtgcagatcgtcacgctgcccccggtgccggacatcgagtgggagaag
cagatcaagctcgccttcgagcgcgaatatctcggtctctacgtctccgaccacccgctc
aacggcatcgagcacatcttgacggccaacgcgaccgccacgatcggtcaggtcgtcagc
gaggacggcccgcaggacggcgagttcgtcacggtggccgggctgatgacctcggtgcaa
ctcaagcgcaccaagaacggcgatccgtatgcgcgggtccagttggaggacctggtcggc
tcgatcgagtgcgtcttcttccccaagtcgtatatgacggtctcgacgatgctcgcgccc
gacacggtcgcggtgatccgcggccggttcaagcgcagcgaggacaccaccgagatcctc
gcccaggacctgaccatcccggagatcaaggaggggccgcgcggcccggtgctgctcacc
atgccgctgacccgggcgacggacgggctggccaacaagctgcgcaacgtgctctcccag
caccccggctccacggaggtgcacgtcaagctcacccagccgggtcgtcaggtgctgttg
cgcctggacccgacgctgcgcgtcacggcgtcaccagagtttttcggcgacatcaaggcc
ctgctgggaccggctgccgtcggcagctga
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