Ornithinimicrobium faecis: NF556_12930
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Entry
NF556_12930 CDS
T10132
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ofa Ornithinimicrobium faecis
Pathway
ofa03018
RNA degradation
Brite
Enzymes [BR:
ofa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NF556_12930
Messenger RNA biogenesis [BR:
ofa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NF556_12930
Ribosome biogenesis [BR:
ofa03009
]
Prokaryotic type
rRNA processing factors
NF556_12930
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
USQ78538
LinkDB
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Position
complement(2767961..2770957)
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AA seq
998 aa
AA seq
DB search
MASMDQSPDTPGETAGDSAPTGGATAFGALFSHEESAVPAATVKKTAARKATKSATKTAA
AKTAAKTATKKSTAKKTSARKSTARAKAADEAVEELLDAGVGTSAGDAGGQSGEQASPDV
TEPAQGESAKNEPVEQGPAKTEPAKDESAKNEPVEDDEDAEDAEEQSAPAGAGSPFGMLF
QAPDLSAVPARPARRAPAQPAQDTDEVEESGAPERPSRQRTRRPVRGGQTSEQTSGQDNS
QDRADSGDSQAKASPDQDQNHQQDDDHDDQDDGEGNNARRRRRRGGKGRRGRGSAGDDSG
DTDGPDTTATDSTNGSDTASSDADGTDAETSGGTVRRRRRSNRRGEDGEARESRRAREEV
TGVRGSTRLEAKRQRRREGREAGRRRTIITEAEFLARRESVERTMVVRGHDDRTQIGVLE
DGVLVEHYVSRATQTTMVGNVYLGRVQNVLPSMEAAFVDIGKGRNAVLYAGEVNWDAAGL
DNNQPKRIENALKSGDSVLVQVTKDPIGHKGARLTSQISLPGRYLVLVPGNSMTGISRKL
PDTERARLKKILKEVVPEGAGVIVRTAAEGASEAELRADVERLTGMWDRIQGKQKGANAP
ALLHGEPDMTVRVIRDVFNEDFAKVVVAGEQAWTEVSDYLGDVAPDLADRLEKWTGTQDV
FSHYRVTEALAKAMDRKVWLPSGGSLVIDRTEAMTVVDVNTGKFVGSGGNLEETVTKNNI
EAAEEIVRQLRLRDIGGIIVIDFIDMVLESNRDLVVRRLLECLGRDRTKHQVAEVTSLGL
VQMTRKRVGAGLIEVFSEQCVHCNGRGILVQSEPIDKSEGHGHQHGGGSGGNGGSSGGGR
RGRGRSGNGGDGGSSTSAPTRPTPAPGGPTPAQIAAAAHAAAIAGSAQPQDDAAPEESSP
AATQASGERSAEPTTPHTAQAVAQPEPQESVAPAESREAVVRAEPKQAAEPQPAVTPEPA
VAPRPRRRRGRVVAPAGPPGGVETDAESDAATPASDNS
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatggaccagagccccgacacgcccggcgaaacagcaggggactcagcaccg
accggcggagccaccgcctttggtgccctgttctcccacgaggagagcgctgtgcccgcg
gccactgtgaagaagaccgccgcccgcaaggccaccaagagcgccaccaagacggctgcc
gccaagacggccgccaagaccgcgaccaagaagtcgacggccaagaagaccagcgcgcgc
aagagcaccgcccgggccaaagcggcagatgaagcggtcgaggagctcctggacgcggga
gtcggcacgagcgcaggcgacgccgggggccagtctggtgagcaggcgagcccggacgtg
accgagcccgcgcagggcgagtccgcgaagaacgagcccgtggagcaggggcctgcaaag
accgagcccgcgaaggacgagtcggcgaagaacgagcccgtggaggacgacgaggacgcg
gaggacgccgaggagcagtcggcaccggccggtgcaggctccccgttcggcatgctcttc
caggcgcctgacctcagtgcggtcccggcccggccggcgcgtcgtgccccggcccagccg
gcgcaggacacggacgaggtcgaggagtcgggggccccggagcggccgtcgcgccagcgc
acgcgccgtcccgtccggggcggacagacctccgagcagacctccggccaggacaactcc
caggaccgtgcggacagcggggacagccaggccaaggcctcgccggaccaggaccagaat
caccagcaggacgacgaccacgacgaccaggacgacggtgagggcaacaacgctcggcgt
cggcgccgccgtggcggcaagggccgacgaggccgcgggagcgccggagatgactctggc
gacaccgacggtcccgacaccaccgcgacggactccacaaacggatccgacaccgcctcc
agtgacgctgacggaacggatgcggagacctcgggtggcacggtgcgtcgtcgccgacgc
agcaaccgccgcggcgaggacggcgaggctcgtgagtcacggcgcgcccgtgaggaggtc
actggagtgcggggctcgacccgcctggaggccaagcggcaacgccgccgcgagggacgc
gaggccggtcgtcgccgcaccatcatcaccgaggccgagttcctggcccgtcgcgagagc
gtcgagcgcaccatggtggtgcgcggtcacgacgaccgcacccagatcggcgttctcgag
gacggcgtgctggtcgagcactacgtctcgcgggccacgcagaccacgatggtcggcaac
gtctatctcggccgtgtccagaatgtgctgcccagcatggaggccgcctttgtcgacatc
ggcaagggccgcaacgccgtgctctatgccggtgaggtcaactgggacgctgccggcctg
gacaacaaccagcccaagcgcatcgagaacgcgctgaagtccggagactcggtgctggtg
caggtcaccaaggaccccattggccacaagggggcccggctgacgtcccagatctccctt
ccggggcgttacctggtgctcgtgccgggcaactcgatgaccggcatctcgcgcaagctc
ccggacaccgagcgagcacgcctgaagaagatcctcaaggaggtcgtcccggagggggct
ggcgtcatcgtccgcaccgcggccgagggagccagcgaggcggagctgcgcgccgatgtc
gagcgcctgaccggcatgtgggaccgcatccagggcaagcagaagggtgccaatgccccg
gcgctcctccacggtgaacccgacatgaccgtccgggtcatccgcgacgtcttcaacgag
gacttcgccaaggtcgtcgtggccggggaacaggcgtggaccgaggtcagcgactatctc
ggtgacgtcgcacccgacctggccgaccggctggagaagtggaccggcacgcaggacgtg
ttcagccactaccgcgtcaccgaggcgctggccaaggccatggaccgcaaggtgtggctg
ccctcgggtggctcgctggtgatcgaccgcaccgaggcgatgactgtcgtcgacgtcaac
acgggcaagtttgttggctccggcggcaacctcgaggagacggtcaccaagaacaacatc
gaggcggccgaggagatcgttcgccagctgcggctgcgcgacatcggcggcatcatcgtc
atcgacttcatcgacatggtgctggagagcaatcgtgacctcgttgtccgtcgcctcctg
gagtgcctgggccgcgaccgcacgaagcaccaggtggcagaggtgacgtcactggggctg
gtccagatgacccgcaagcgggtcggcgccgggctgatcgaggtcttctccgagcagtgc
gtccactgcaacggccgcggcatcctggtccagtccgagccgattgacaagtctgagggc
cacggtcaccagcacggtggcggctctggcggcaacggtggcagctctggtggtggccgc
cgcggtcgtggccgctccggcaatgggggcgacggcggctcgagcaccagtgctccgacg
cgtccgaccccggctcccggtggccccacgccggcgcagatcgctgccgccgcgcacgcc
gccgcgatcgctggctctgcccagccacaggacgacgccgcgccggaggagtcctcgcca
gcggcgacccaggccagcggtgagcggtcagcagagccgaccactccgcatacggcacag
gccgttgcccagcccgagccgcaggagtctgttgccccggcggagtcgcgggaggccgtt
gtcagggccgagccgaagcaggcagcagaacctcagccagcggtcacccctgagcctgcg
gtggcaccgcgtccgcgtcgtcgacgtggccgcgtggtggcccccgctggccctcccggt
ggggtggagaccgacgccgagtcggacgccgcgacacccgcgagtgacaacagctag
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