Ornithinimicrobium faecis: NF556_13390
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Entry
NF556_13390 CDS
T10132
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ofa Ornithinimicrobium faecis
Pathway
ofa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ofa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NF556_13390 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ofa03400
]
NF556_13390 (mutM)
Enzymes [BR:
ofa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NF556_13390 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NF556_13390 (mutM)
DNA repair and recombination proteins [BR:
ofa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NF556_13390 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf_C2H2_13
MCR
Auto_anti-p27
DZR_2
PspAB
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
USQ78621
LinkDB
All DBs
Position
complement(2870855..2871772)
Genome browser
AA seq
305 aa
AA seq
DB search
MPELPEVEVVRGGLVDHVVGRRIAAAAITGTRVARRHEAGPLDLAARLTDATVLSADRRG
KYLWLVIQTPDDDPHALVVHLGMSGQLLVEEAGAPREKHLHAAFDFDDDGPQLRFVDQRT
FGGLALTELVPDRWPGSTHTHGVPVPVEHIGPDPLEPAYDQPAVVRALKRRHTAIKRALL
DQGLVSGVGNIYADEALWRAQVNPLRETSALTKPALGRVLDHATEVMREALGQGGTSFDA
LYVNINGASGYFDRSLHAYGREGQPCNRCGTPIRREAFMNRSSHYCPRCQPRPRVRRAIT
DLSRR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagctgcctgaggttgaggtcgtccgtggcggactggtggaccatgtcgtcggc
cggcgcatcgcagcggccgccatcaccggcacccgggtggctcgccggcacgaggccgga
ccgctggatctggccgcccgactgaccgacgccacggtgctctctgccgatcgccgcggg
aaatatctgtggctcgtcatccagacgcccgatgacgacccgcacgcactggtcgtccac
ctcggcatgagtgggcaactgctggtcgaggaggcaggcgcaccgcgcgagaagcacctg
cacgccgcttttgacttcgacgacgacggaccccagctgcgcttcgttgaccagcgcacc
ttcggtggtctggcgctgaccgagctggtgcctgatcggtggcccggcagcacccacacc
cacggggtgccggtgccggtcgagcacatcggccccgacccgctcgagccggcatacgac
caaccggcggtggtccgcgcactcaagcgtcggcatacggccatcaaacgggccctgctg
gaccagggactggtcagtggcgtcggcaacatctatgccgacgaggccctgtggcgcgct
caggtgaaccccctgcgcgagacctcggcgctgaccaagccggcgctcggccgagtcctg
gaccacgccaccgaggtgatgcgggaggcgctcggccagggcgggaccagcttcgacgcc
ctctatgtcaacatcaacggcgccagcggctattttgaccggtcgctgcacgcctacggc
cgagaggggcaaccgtgcaaccggtgcggcacaccgatccggcgcgaggcgttcatgaac
cggtcctcgcactactgcccccgctgccaaccgcgccccagggtgcgtcgagccatcacc
gatctctcccgacgctga
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