KEGG   Ornithinimicrobium faecis: NF556_13485
Entry
NF556_13485       CDS       T10132                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
ofa  Ornithinimicrobium faecis
Brite
KEGG Orthology (KO) [BR:ofa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ofa03032]
    NF556_13485
   03036 Chromosome and associated proteins [BR:ofa03036]
    NF556_13485
   03400 DNA repair and recombination proteins [BR:ofa03400]
    NF556_13485
DNA replication proteins [BR:ofa03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    NF556_13485
Chromosome and associated proteins [BR:ofa03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    NF556_13485
DNA repair and recombination proteins [BR:ofa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      NF556_13485
SSDB
Motif
Pfam: Bac_DNA_binding HC2 Acyl-CoA_dh_2
Other DBs
NCBI-ProteinID: USQ78640
LinkDB
Position
2886687..2887412
AA seq 241 aa
MNKAELIDRLSTPLGSRRDATLAVEALVDVVIREVAAGGSVGITGFGTFERADRAPRTGR
NPRTGESVPIPGTSTPRFRPGTYFKEVLSDPKALPAEGLAGGRAPAGGSGATQGKAKSTT
TGSTRKKAAPRKTTTAKTTASKTTASKTTASKTTASKTTASKTTASKTATSKPAARKPAA
SKLVAAKDVAAVETKLKDSARKTLKKSHDADKKSKKAKDAKADKPSKSDGGKKKDKKSKK
K
NT seq 726 nt   +upstreamnt  +downstreamnt
gtgaacaaggcagagttgatcgacaggctgagcacccccttggggagccgccgagatgcc
accctggccgtcgaggcgttagtcgatgtcgtgatccgtgaggtcgccgctggtggcagc
gtcggcatcactgggttcggcacctttgagcgcgctgatcgcgccccccgcacggggcgc
aacccccggacgggcgagagcgtcccgatccccggcacgagcacaccgcgttttcgcccc
ggcacctacttcaaggaggtcctgagcgaccccaaggcgctgcccgctgagggcctggcc
ggtgggcgcgctccggcgggtggttccggtgccacccagggcaaggcgaagagcacaacg
acgggcagcacccgcaagaaggccgcgccccgcaagaccacgacggctaagaccacggca
agcaagaccacggcaagtaagaccacggcaagcaagaccacggcgagcaagaccacggca
agcaagaccacggcgagcaagacggcaacgagcaaacctgcggcgcgcaagcccgcggcc
tcgaaactggtggccgccaaggacgtggccgcagtggagaccaagctcaaggactcagct
cgcaagaccctgaagaagtctcacgacgcggacaagaagtccaagaaggccaaggacgcc
aaggcggacaaaccgagcaagtccgacggtggcaagaagaaggacaagaagtccaagaag
aagtag

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