Ornithinimicrobium faecis: NF556_13715
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Entry
NF556_13715 CDS
T10132
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ofa Ornithinimicrobium faecis
Pathway
ofa03030
DNA replication
ofa03430
Mismatch repair
ofa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ofa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NF556_13715 (holA)
03430 Mismatch repair
NF556_13715 (holA)
03440 Homologous recombination
NF556_13715 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ofa03032
]
NF556_13715 (holA)
03400 DNA repair and recombination proteins [BR:
ofa03400
]
NF556_13715 (holA)
Enzymes [BR:
ofa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NF556_13715 (holA)
DNA replication proteins [BR:
ofa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NF556_13715 (holA)
DNA repair and recombination proteins [BR:
ofa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NF556_13715 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
BREX_PglY_6th
B12-binding_2
MukF_M
TPR_4
Motif
Other DBs
NCBI-ProteinID:
USQ78679
UniProt:
A0ABY4YPZ7
LinkDB
All DBs
Position
complement(2931179..2932159)
Genome browser
AA seq
326 aa
AA seq
DB search
MSEPDIPDLVLISGPEQILAQRAVDTVLTTLRAHDPEVDVVKLPAVDYEPGALGVHASPS
LFGGWTAIVVEDFDEADDALVEDAHALALDPPEGVTLIVRHKSGNRGKRVLDVLKKAGRV
ITAPAVKSDRDKVSFVQQEFKDARRQIEEQAVTALVQAVGKDVAELATACAQLVRDTTGK
VRTTDVETYYGDKVETTGFKVADAALRGDTAEALRLLRHALAGGLDPVPIVAVLAMQLRQ
VGKVASAGRASSGTLARDLGMAPWQVDQARRTAQGWDGIRLGRAIQAVAAADVEVKGGVR
TGTAVARDPEYAVEMAVLAVSRERRG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagcccgacatccccgacctggtgctgatctccgggccagagcagatcctcgcc
cagcgcgctgtcgacaccgtgctgaccacgctgcgggcccacgacccagaggtcgacgtc
gtgaagctccccgcggtcgactacgagcccggcgcgcttggcgtgcacgccagcccctcc
ctctttggcggatggaccgcgatcgtcgtggaggactttgacgaggccgacgacgcgctg
gtcgaggacgcgcacgccctggcactcgaccctcccgagggcgtcacgctgatcgtccgg
cacaagagcggcaaccgcggcaagcgggtcttggacgtgctcaagaaggccggccgggtg
atcaccgcccctgccgtgaagtccgaccgcgacaaggtctcgttcgtccagcaggagttc
aaggacgcccggcgccagatcgaggagcaggccgtcaccgccctggtgcaggcggtcggc
aaggacgtcgccgagttggcgacggcctgtgcccaactcgtccgggacaccaccggcaag
gtccgcacgaccgacgtcgagacctactacggcgacaaggtcgagacgaccgggttcaag
gtggccgacgcggccctgcgcggcgacacggctgaggcgctgcggttgctgcggcacgcc
ctggccgggggactggacccggtgccgatcgtcgcggtgctcgccatgcagttgcgtcag
gttggcaaggtggccagcgccgggcgggcgagctcggggaccctggcccgagacctgggc
atggcaccctggcaggtcgaccaggcgcgccggaccgctcaggggtgggacggcatacgg
ctgggccgggcgatccaggcggtcgccgctgcggacgtggaggtcaagggcggggtgcgg
accgggacggccgtcgccagagacccggagtatgccgtggagatggccgtcctggccgtg
tcccgggagcgtcggggttga
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