Ornithinimicrobium faecis: NF556_14365
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Entry
NF556_14365 CDS
T10132
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ofa Ornithinimicrobium faecis
Pathway
ofa03420
Nucleotide excision repair
ofa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ofa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NF556_14365 (pcrA)
03430 Mismatch repair
NF556_14365 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ofa03400
]
NF556_14365 (pcrA)
Enzymes [BR:
ofa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NF556_14365 (pcrA)
DNA repair and recombination proteins [BR:
ofa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NF556_14365 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NF556_14365 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
USQ78801
LinkDB
All DBs
Position
complement(3076821..3079250)
Genome browser
AA seq
809 aa
AA seq
DB search
MSTLFDNVPLPPMSPAQASGAVPVDDTGVPLWALEEEPAPDFAAAPQQSPGVDPETLLEG
LNGPQREAVVHAGAPLLIVAGAGSGKTRVLTHRIAYLLGHRGVTPGQVLAITFTNKAAAE
MRERVETLIGPRARAMWVSTFHSACVRILRREAATVGLKSTFSIYDAADSQRLMAMVVRD
LDLDPKRYPPRVLCHKVSGAKNELIDEETFAAQVGNNPYEAVVAQAYTDYQRRLRRANAL
DFDDIISMTVNILQAFPAVREHYRRRFRHVLVDEYQDTNHAQYTLVRELVGTQDEEVPPA
ELCVVGDADQSIYAFRGATIRNIVEFEKDYPQARTILLEQNYRSSQRILRAANSVISRNP
GRRDKSLWSELGDGEMITGYVADDEHDEASFVAQTIDKLGDEHDVAPKDVAVFYRTNAQS
RALEEVFVRTGLPYKVVGGTRFYERREVKDALAYLRVVANPADDVNLRRILNVPKRGIGD
RAQAAVAALSTRERIPFVAALGRVEDAPGIATRSIAAVQAFTAMLEAVGRVAEDEDSGVG
DLLEAILDQSGYTKELRASHDPQDETRIENLAELVAVAREFDENYPEGTLVDFLEQVSLV
ADADEIPQGGDGTDAGVVTLMTLHTAKGLEFPVVFLTGLEDGTFPHQRSMDDPTELEEER
RLAYVGITRARQRLYLSRAGTRASFGAPQFHPASRFLDEIPPDVVDWERSDRDRMRAGGR
PSASVQQGWGGGSRGGSQGVVRLNPRGSRGRSPIVPVSVSAGDRVSHDSFGLGTVIRVEG
SGDNTMAHVDFGDSGVKRLLLRYAPLEKL
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgctcttcgacaacgtccccctgcccccgatgtcgcccgcccaggcgagtggt
gccgtgcccgtggacgacaccggggtcccgttgtgggcgctggaggaggagccggccccg
gacttcgcggcggcaccgcagcagtcgcccggagtggaccccgagaccctgctggagggc
ctcaacggaccgcagcgcgaggcagtggtccacgccggggcgcccctgctgatcgtggcg
ggtgcgggctcgggcaagacccgagtgctcacccaccgcatcgcctacctcctggggcac
cgtggggtgacaccgggtcaggtgctggcgatcaccttcaccaacaaggctgccgccgag
atgcgcgagcgcgtcgagacgctcatcggtccgcgggccagggccatgtgggtctccacc
ttccactccgcctgcgtgcgcatcctgcgtcgcgaggcggcgacggtcgggctgaagtcc
accttctcgatctatgacgcggctgacagccaacgcctgatggcgatggtcgtgcgagac
ctcgacctggaccccaagcgctatccgccccgggtgctctgccacaaggtgtcgggcgcc
aagaacgagctcattgacgaggagaccttcgcagcgcaggtcggcaacaatccctatgag
gcggtcgtcgcccaggcctacaccgactaccagcggcgcctgcgccgggccaacgccctg
gacttcgacgacatcatctcgatgaccgtcaacatcctgcaggccttcccggcggtgcgc
gagcactaccgccgcaggttccgtcatgtgctcgtggacgaataccaggacaccaaccac
gcgcaatacaccctggtgcgtgagctggtcgggacacaggacgaggaggtgccgccagcc
gagctgtgcgtcgtcggcgatgctgaccagtccatctacgccttccgcggcgccaccatc
cgcaacatcgtggagttcgagaaggactatccccaggcccgcaccatcctgctcgagcag
aactaccgctccagtcagcggatcctgcgtgctgccaactcggtgatctcgcgcaacccc
ggccggcgggacaagagcctgtggtccgagctgggtgacggcgagatgatcaccggctac
gtcgccgacgacgagcacgacgaggcctcgttcgtggcgcagaccatcgacaagctcggc
gacgagcacgacgtcgcgcccaaggacgttgcggtcttctaccgcaccaacgcccagtcc
cgtgcgctggaggaggtcttcgtccgcaccggcctgccctacaaggtcgtcgggggcacc
cgcttctatgagcggcgcgaggtcaaggacgccctggcctatctgcgcgtggtcgccaac
ccggccgacgacgtcaacctgcggcgcatcctcaacgtgcccaaacgtgggatcggcgac
cgtgcccaggccgcggtcgcggccctgtcgacccgggagcgcatcccgtttgtcgccgct
ctggggcgggtcgaggacgcgcccggcatcgccacgcgatcgatcgcggcggtgcaggcc
ttcactgcgatgctcgaggccgttggcagggtcgccgaggacgaggactccggggtgggg
gacctcctcgaggcgatcctggaccagtcgggctacaccaaggagctgcgggccagccac
gacccacaggatgagacccgcatcgagaacctcgccgagctggtcgcggtcgcgcgtgag
ttcgacgagaactatcccgagggcaccctcgtggacttcctcgagcaggtgtcgctggtg
gctgacgccgatgagatcccacagggtggagacggcacggacgccggggtcgtcaccctg
atgaccctgcacacggccaagggcctggagtttccggtggtcttcctgaccggcctggag
gacggcaccttcccccaccagcgctcgatggacgaccccacggagctggaggaggagcgt
cggctcgcctatgtggggatcacccgggcgcgacagcgcctctatctgagccgtgcgggc
acccgcgcctcgttcggggcaccacagttccacccggcctcacgtttcctggacgagatc
ccgcccgatgtcgtcgactgggagcgctcggaccgtgaccgcatgcgggccggcggccgt
cccagcgcctcggtgcagcagggatggggcggcgggtcgcgcggcgggtcccagggcgtc
gtgcgcctcaacccgaggggctcgagggggcgctcgccgatcgtgccggtgtcagtgtct
gcgggggaccgggtcagtcacgactcgttcggtctgggcacggtcatccgtgtcgagggc
agcggggacaacaccatggcgcacgtcgacttcggggactcgggcgtcaaaagactcctg
ctgcgttatgccccgctcgagaagctctga
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