Ornithinimicrobium faecis: NF556_16300
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Entry
NF556_16300 CDS
T10132
Symbol
lsrB
Name
(GenBank) autoinducer 2 ABC transporter substrate-binding protein LsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
ofa Ornithinimicrobium faecis
Pathway
ofa02010
ABC transporters
ofa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ofa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NF556_16300 (lsrB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NF556_16300 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ofa02000
]
NF556_16300 (lsrB)
Transporters [BR:
ofa02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
NF556_16300 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
DUF7307
Motif
Other DBs
NCBI-ProteinID:
USQ79163
LinkDB
All DBs
Position
complement(3481439..3482488)
Genome browser
AA seq
349 aa
AA seq
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MTGAIGIAAACLMLAACGSGDGDNGGSSDGGDGGDLPQVAFIPKLTGVGFFEAGGAGAEA
AGGDFGLDVQYRGSAEASVAKQVELINTYTSQGYDALIVSSVSPDGLCSALKKAMDQGVV
VLTWDSDTNPECRQFYISQGTPDQLGSLLVEMAAENVPTDEAAEVAFHYSSPTVTDQNQW
AEVAKGIIESDTEWEIVDTVFSENQTELAVQQTEALVNANPDLKAIIAPDANALPGSAQA
LENLSADGIELVGFSTPNVMREYIENDVLDRFALWDVQQQGAMSVAVAAHLLDGNTLNVG
DTFEAEGFGTLEVSPNSVQGYDYEADGNGIIVMPERTVFTADNIGDFDF
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
ttgacgggtgccatcggcatcgcagcagcttgcctgatgctcgccgcatgtggctctggt
gacggagacaatggcggaagcagcgacggtggggacggtggagacctcccccaagtggca
ttcattccaaagctcactggcgttggattcttcgaggcgggcggtgccggcgccgaggcc
gctggcggcgactttggcctcgacgttcagtatcgcggttctgccgaggcctcggtggcg
aagcaggtagaactgatcaacacctacacctcccagggatacgacgctctgatcgtctcc
tcggtgtcgccggacggcctgtgctccgcgctgaagaaggcaatggaccaaggcgtcgtc
gtcctcacctgggactctgacaccaacccggaatgccggcagttctacatcagccagggc
acgccggatcagttgggttcgctgctcgtcgagatggccgccgagaatgtccccacagat
gaggctgccgaggttgctttccactactccagccccactgtgacggaccagaaccagtgg
gccgaggttgccaagggcattatcgagtcggacacggagtgggagatcgtcgacacagtc
ttctcggagaaccagaccgaactcgcggtgcagcagacagaggcgctggtcaacgccaac
ccggatctcaaggcgatcatcgccccggacgcaaacgctctgccgggcagtgcgcaggca
ctggagaacctgagcgctgacggcattgaactcgtcggcttctcgaccccgaacgtcatg
agggaatacatcgagaacgacgtgctcgacaggttcgccctgtgggacgtccagcagcag
ggcgctatgtccgtggcggtggccgcacacctgctcgacgggaacaccttgaacgtcggc
gacaccttcgaagccgagggcttcggcacgctggaggtctcgccgaactccgtccagggg
tatgactatgaagcggatggcaacggcatcatcgtgatgcccgagcggaccgtcttcaca
gccgacaacattggtgacttcgacttctga
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