Ornithinimicrobium faecis: NF556_17365
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Entry
NF556_17365 CDS
T10132
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ofa Ornithinimicrobium faecis
Pathway
ofa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ofa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NF556_17365 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ofa03021
]
NF556_17365 (rho)
03019 Messenger RNA biogenesis [BR:
ofa03019
]
NF556_17365 (rho)
Transcription machinery [BR:
ofa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NF556_17365 (rho)
Messenger RNA biogenesis [BR:
ofa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NF556_17365 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Spore_III_AA
ResIII
FANC_SAP
SAP
S1CSD-TOTE-2
AAA_25
Motif
Other DBs
NCBI-ProteinID:
USQ82241
UniProt:
A0ABY4YZQ0
LinkDB
All DBs
Position
complement(3729576..3731702)
Genome browser
AA seq
708 aa
AA seq
DB search
MRVAELQSLAGSMGITVSPKMRKADLVEAIRARREGGAQAATSKPATSKPETSKGATAPE
KSAPTNTESAAPQGEAGASSAETGQRAPRRSRRVAAAAGAPQPRTDRAPEGDGTAAQDGA
RETGGTDTRQGGDPQDRDQQGRDQQGREAQEGARDGGRQGRNQQGRDQRDNRQQDNSQGE
GEGRDQRDNQQNNRGGQQDNRQDNRGGQQNDRQDNRGQQNDRQDNRGQQGNRQQDNRQDN
SGDQQDNRQQDNRQGGNRQGGNQQGGNQQGGNNNRNDNRYDDEDGGRGRRRSRQRGRDRK
RGRSRGDNDNYADEQETTYNEEDVLVPVAGVLDILDNYGFIRTTGYLPGPSDVYVPMGIV
RKNGLRKGDAVTGAIKAGDQQQHSGGRGDRQKYNALVRLDTVNGQSPEEAKARPEFSKLT
PLYPQDRLRLETEQKNLTTRMIDLVSPIGKGQRGLIVSPPKAGKTLVLQSIANAITQNNP
EAHLMIVLVDERPEEVTDMQRTVKGEVIASTFDRPADDHTTVAELAIERAKRLVELGGDV
VVLLDSITRLGRAYNLAAPASGRILSGGVDSSALYPPKRFFGAARNIEFGGSLTILATAL
VETGSKMDEVIFEEFKGTGNMELRLSRQLADRRIFPAIDVNPSGTRREEILMGAEELKIM
WKLRRVLSALDSQQAVELLLDRLRKTKSNHEFLVQVQQTSSVKLDDED
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtggccgaactgcagtctctggccgggagcatgggcatcaccgtgtcccccaag
atgcgcaaggcggaccttgttgaggccattcgggcccggcgcgagggcggcgcgcaggca
gcaaccagcaagcctgcgaccagcaagcccgagaccagcaagggtgcgaccgcgcccgag
aagagcgcgcccaccaacaccgagtcggccgcgccgcagggcgaggcgggcgccagctcg
gcagagaccggccagcgtgccccgcgccgctcgcgccgagtcgccgctgctgccggtgcg
ccgcagccgcgcaccgaccgcgcacccgagggcgacggcaccgccgcgcaggatggtgca
cgtgagaccggcggcaccgacacccggcagggcggtgacccgcaggaccgtgaccagcag
ggccgtgaccagcagggtcgcgaggctcaggagggcgcccgtgacggcggccgccagggt
cgcaaccagcagggccgtgaccagcgcgacaaccgtcagcaggacaacagccagggcgag
ggcgagggtcgcgaccagcgcgacaaccagcagaacaaccgcggtggccagcaggacaac
cgccaggacaaccgtggcggccagcagaacgaccgtcaggacaaccgcggccagcagaac
gaccgccaggacaaccgcggccagcagggcaaccgtcagcaggacaaccgccaggacaac
agcggtgaccagcaggacaaccgccagcaggacaaccgccagggcggcaaccgccagggt
ggcaaccagcagggcgggaaccagcagggcggcaacaacaaccgcaacgacaaccgctat
gacgatgaggacggcggccgtggccgtcgtcgcagccgtcagcgggggcgcgaccgcaag
cgcggacgcagccgcggcgacaacgacaactacgccgacgagcaggagaccacctacaac
gaggaggacgtgctcgtccccgtcgccggtgtcctggacatcctcgacaactacggtttc
atccgcacgaccggctacctgcccggccccagcgacgtctacgtcccgatgggcatcgtg
cgcaagaacggcctgcgcaagggtgacgcggtcaccggcgcgatcaaggccggcgaccag
cagcagcactccggtggtcgtggcgaccgccagaagtacaacgcgctcgtccgcctggac
accgtcaacggacagtccccggaggaggccaaggcccgcccggagttctccaagctgacc
ccgctctatccccaggaccgcctgcgcctggagaccgagcagaagaacctcaccacccgg
atgatcgacctggtcagcccgatcggcaagggccagcgcggtctgatcgtctccccgccc
aaggcgggcaagaccctcgtcctgcagtcgatcgccaacgcgatcacgcagaacaacccc
gaggcgcacctgatgatcgtcctggtggacgagcgcccggaagaggtcaccgacatgcag
cgcacggtcaagggtgaggtcatcgcctccaccttcgaccgtccggccgatgaccacacg
acggtcgccgagttggcgatcgagcgcgccaagcgcctcgtggagctcggtggcgacgtg
gtcgtgctcctcgactcgatcacccgcctgggccgcgcctacaacctggcggcccccgcc
agcgggcgcatcctctccggtggtgtcgactccagcgcgctctacccgcccaagcgcttc
ttcggtgccgcccgcaacatcgagttcggcggctcgctgaccatcctggcgaccgcgctc
gtggagaccggctccaagatggacgaggtcatcttcgaggagttcaagggcaccggcaac
atggagctgcgcctgtcccgccagctggcggaccgccgcatcttcccggccatcgacgtc
aacccctccggcacgcgccgcgaggagatcctgatgggcgccgaggagctgaagatcatg
tggaagctgcgtcgcgtgctctccgcgctcgactcccagcaggccgtcgagctgctgctg
gaccggctccgcaagaccaagtccaaccacgagttcctcgtgcaggtgcagcagacctcg
tcggtcaagctcgacgacgaggactga
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