Oxalobacter formigenes: BRW83_0271
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Entry
BRW83_0271 CDS
T04835
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ofo
Oxalobacter formigenes
Pathway
ofo03030
DNA replication
ofo03410
Base excision repair
ofo03420
Nucleotide excision repair
ofo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ofo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRW83_0271 (polA)
03410 Base excision repair
BRW83_0271 (polA)
03420 Nucleotide excision repair
BRW83_0271 (polA)
03440 Homologous recombination
BRW83_0271 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ofo03032
]
BRW83_0271 (polA)
03400 DNA repair and recombination proteins [BR:
ofo03400
]
BRW83_0271 (polA)
Enzymes [BR:
ofo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BRW83_0271 (polA)
DNA replication proteins [BR:
ofo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BRW83_0271 (polA)
DNA repair and recombination proteins [BR:
ofo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BRW83_0271 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BRW83_0271 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ARQ45040
LinkDB
All DBs
Position
260272..263016
Genome browser
AA seq
914 aa
AA seq
DB search
MNKLLLLVDGSSYLYRAYHALPDLRNSAGEPTGAIYGFLNMLRRLQKDYPTAYRACIFDA
KGKTFRNDLYQEYKANRAAMPDDLVEQTGHILELVDMLGWPILQVEGVEADDVIGTLAVK
AHEDGFDTIVSTGDKDMSQLVDDKVTLVNTMNNEVLDREGVIKKFGVPPERIVDYLSLVG
DTSDNVPGVAKVGPKTAVKWLTQYHTLDGVIENAQNIGGAVGENLRQSLDWLPQAHELVR
IRTNCELPDKFASIETSLLKKPENTEGLKKAFERFGFKSWAKELNAARQETPKAAGQIAL
FDESEDKKSGFVNDKEYETVLTEKQLEKWLEKIDKADLTAIDTETTSLDVMNAKLVGISL
SIEPGHAAYIPLAHHSMEQSEQLPLQSVLDKLKPWLENPKKHKVGQNLKYDSHVLANYGI
RLQGIVHDTLLESYVLESHRRHDMDSLSERFLDYKPVSYTDICGKGASQIGFDEIAIDVA
THYAAEDADVTLQLHQSMWPRLKENDGLRFIYEKIEIPTSIVLQKMERNGVLIDVDKLNV
QSRELGVKMDSLQENAYVTAGQPFNLNSPKQLGELLFDKLKLPMIKKTPSGAPSTSEEVL
EKLAEDFPLPKIILDYRGMSKLKTTYTDKLPRMVNPETGRVHTNYAQAVAVTGRLASNDP
NLQNIPIRSEEGRRIREAFIASPGNKIISADYSQIELRIMAHLSDDASLLKAFHDGQDVH
RATASEIFDITPLEVTSDQRRYAKVINFGLIYGMSAFGVASNLGISRTDAKNYIDRYFER
YPGVARYMDETRQLAREQGYVETVFGRRLWLPEINSPNGPRRQAAERAAINAPMQGTAAD
IIKLSMIAVQDWLEKEKLDSKLIMQVHDELVLDVPEKELVLVREKLPELMAQVARLKVPL
IAEVGVGDNWDQAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacttttgttattagttgacggttccagttatctttaccgcgcctatcatgca
ttgccagaccttcgcaactccgcaggggaacctaccggagccatttacggtttcctgaat
atgcttcgccgtttgcagaaagattatcccacagcataccgtgcctgtatatttgacgca
aagggtaaaacattccgcaatgatctctatcaggaatacaaggcgaacagggctgccatg
ccggacgatctggtcgaacagacaggtcatattctcgagcttgtcgatatgctgggatgg
cccattttacaggtggaaggagtcgaagcggacgacgttatcgggacattggcggtaaag
gcacatgaagacgggttcgataccatcgtttcaaccggcgacaaggatatgtcccagctg
gtcgatgacaaggtaacactcgtcaataccatgaacaatgaagtgctggatagggaaggt
gtcatcaaaaagtttggcgtaccgccagaaagaatcgtcgattatctttcgctggttggt
gatacatccgacaatgtgccgggtgttgccaaggtaggaccgaaaacagccgtcaaatgg
ctgacgcaataccatactctcgatggcgtcatcgaaaacgcgcaaaacattggcggagcg
gtcggtgaaaatctgagacagtcgctggactggcttccgcaggcgcatgaactggtcaga
atccggacgaattgcgaactgccggacaaattcgcctccatcgaaacatcgctccttaaa
aaaccggaaaacaccgaaggcctgaaaaaagcgtttgaacgtttcggtttcaagagctgg
gcaaaagagctgaatgctgcccgtcaggaaactccgaaagcagctggacagattgcactg
tttgatgagtcggaagataaaaaatcaggatttgtcaatgacaaggaatatgaaaccgtc
ctgactgaaaaacaactcgaaaaatggctcgaaaaaatcgacaaggctgacctgacagct
atcgatactgaaacgacatcactggatgtcatgaacgcaaaactcgtcggaatttccctc
tccatcgaacccggtcatgccgcttacattcctctcgctcatcacagcatggaacaaagc
gagcaacttccactgcaatccgttctcgacaaactcaaaccctggctggaaaacccgaag
aaacacaaagtcggccagaatctcaagtatgacagccatgtgctcgccaattacggtatc
cggttgcaagggatcgttcacgataccctgctggaatcctatgtcctcgaatcgcacagg
cgacatgacatggacagcctgtccgaaaggtttctggattacaaaccggtcagctatacc
gatatctgtggcaaaggtgcttcccagatcggcttcgatgaaatcgccatcgatgtcgcg
acccactacgctgctgaagatgccgacgtgaccttgcaacttcatcaatccatgtggcca
cgcctgaaagaaaacgatggccttcgttttatctatgaaaaaatcgaaatcccgacgtcc
atcgtccttcagaaaatggaacgcaatggcgtactgatcgatgtcgataaactgaatgtc
caatcacgtgaactgggcgtgaaaatggacagccttcaggaaaatgcctatgtaacggca
ggacagcctttcaacctcaattcacccaaacagctgggtgaactgcttttcgacaagctc
aaactgccgatgatcaagaaaacgccatcgggcgcaccctcgacaagcgaagaagtgctg
gaaaaactggctgaagatttcccgcttccgaaaatcattctggattaccggggcatgtcg
aaactgaaaacgacttataccgacaaattgccgagaatggtcaatccggaaaccggacgc
gttcatacaaattacgcacaagctgtagctgtcaccggccggctcgcatcgaacgacccc
aatctgcaaaatattccgatccgttcggaagagggcaggcgtatccgtgaagcttttatc
gcctcacccggaaacaaaatcatttcggccgactattcccaaatcgagctcaggatcatg
gcgcatctttccgacgacgccagtttgctgaaagctttccacgatggacaggacgtccat
cgtgcgacagcatccgaaatattcgacatcactcctctggaagtgacctccgaccagaga
cgttatgccaaagtcatcaatttcggcctcatttatggcatgagcgctttcggtgtcgcc
tccaatctgggcatttcccgcacagacgccaaaaactatatcgaccgttattttgagcgc
tatccgggtgttgcccgttatatggatgaaacccgccagctggcccgggaacagggttat
gtggaaacggtttttggaagaagactctggctacctgaaatcaattcgccaaacggtccg
cgccgtcaggctgccgaaagggcggctatcaacgcgccgatgcagggaacagcggccgat
atcatcaaattgtcgatgatcgccgttcaggactggctggaaaaagaaaagctggattcg
aaactgatcatgcaggtacacgatgaactggttctggatgtgccggaaaaagaactggtt
ctggttcgggaaaaactgcctgaactgatggcgcaggtcgccagactcaaagtgccattg
atagccgaagtcggcgttggagacaactgggaccaggcccattag
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