Oxalobacter formigenes: BRW83_0461
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Entry
BRW83_0461 CDS
T04835
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ofo
Oxalobacter formigenes
Pathway
ofo03420
Nucleotide excision repair
ofo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ofo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BRW83_0461 (uvrD)
03430 Mismatch repair
BRW83_0461 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ofo03400
]
BRW83_0461 (uvrD)
Enzymes [BR:
ofo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRW83_0461 (uvrD)
DNA repair and recombination proteins [BR:
ofo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BRW83_0461 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BRW83_0461 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ARQ45228
LinkDB
All DBs
Position
476400..478673
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AA seq
757 aa
AA seq
DB search
MDTILDNLNPEQLAAVTLPSQSALILAGAGSGKTRVLTTRIAWLLKTGQVSTSGIMAVTF
TNKAAKEMLSRLSVMFPVNARGMWIGTFHGLCNRLLRTHYQDAALPQSFNILDSQDQLST
VKRLLKTNNIDDDKYPPRNLVYFINHAKESGYRASHVEPQDDYERKMVELYSLYEDQCQR
EGVVDFAELLLRSYELLERNQTLREHYQDRFRHILVDEFQDTNNLQYKWLKLLAGNDSSI
FAVGDDDQSIYAFRGANVGNMLSFQQDFNVQNLIRLEQNYRSHGNILEAANTLIAHNRNR
LGKNLHTDAGEGEPIRICEAPSDLNEVQWILEEVNHLIREGMERKQIAVLYRSNAQSRVI
EHGLFSAGIPYRVYGGLRFFERAEIKHAIAYLQLIDNPANNAAFLRVVNFPARGIGARTI
ENLQEMARMHDISLFEAIPYVSGKGGTALGSFIRLIQSIRAEVQPMNLPTLIQTVLEKSG
LMMHYQTEKEGADRLENLEQLVSAAMLFLSEEGFSQEAPALMTEAVTPAGEKSMLTVDEV
MDADVPLSMIMSPLSAFLTHASLEAGENQAQEGQDALQLMTVHSAKGLEFDAVFITGLEE
GLFPHENSAREDGGLEEERRLMYVAITRARKRLYLSYAQTRMLHGHMRYNVSSRFVAELP
DKTMKWLTPKKQSSYLNPRHEPTARFDQSSVPQMQAPASFHKNSEWRIGETVIHKKFGEG
VIVGLEGQGANVRANINFGRHGMKLLDLSIAKLEHAS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggataccattctcgataatctcaatcccgagcagctcgctgccgttacattaccctcc
caatccgcgctgattctggctggtgccggttccggcaagacgcgagttttgacaacccga
atagcatggctgttgaaaacgggacaggtgtcgacttccggcatcatggctgtgacgttt
acgaacaaggcggcaaaggaaatgttgtcacgcctttcagtcatgtttccggtcaatgcg
cgaggcatgtggatcgggacgtttcacggcttgtgcaaccgtcttttgagaacgcattat
caggatgccgcgttgccgcaatccttcaatattctggactcgcaggaccagttatcgacc
gtcaagcgccttttgaagacgaacaacatcgacgacgacaaatatccgccgagaaatctc
gtttatttcatcaatcatgcgaaggaaagcggttatcgtgcatcccacgtcgagccacag
gatgactacgagcgcaagatggttgagctgtacagcctctatgaagaccagtgccagcgg
gaaggtgtcgtcgattttgccgagcttctgctgagaagttacgagcttttggagcggaac
cagactttacgggagcattatcaggaccgtttcaggcatattctggtggacgaatttcag
gacacgaataatttgcagtacaaatggctgaagcttctggcggggaacgattcgtccatt
tttgccgtgggtgacgacgaccagagcatttacgctttccgtggcgccaatgtcggcaat
atgctttcgttccagcaggactttaatgtccagaacctgatcaggctggaacagaattac
cgttcacacggcaatatcctcgaagcggccaataccctgatcgcacacaaccggaaccgt
ctgggcaagaacctgcataccgatgccggtgaaggggaaccgatccggatttgtgaagcg
ccgtccgatttgaacgaagtgcaatggattctggaagaagtcaatcacctgatacgggaa
gggatggagagaaaacagatcgccgtcctttatcgttccaatgcacagtcgcgcgtgatc
gagcatgggcttttcagtgcaggtattccctatcgggtttatggtggtctccgcttcttc
gaacgggccgaaatcaagcatgccattgcgtaccttcaattgatcgacaatcctgccaac
aatgcggctttccttcgggtcgtcaattttccggctcgcggtatcggtgcccggacgatc
gaaaatctgcaggaaatggcacgaatgcatgacatttcgctttttgaagccattccctat
gtttcaggcaagggcggcacggcactgggatcattcatacggctgatccagagtatccgc
gccgaggtgcagccgatgaatttgccgacacttatccagactgtgctggaaaaaagcggc
ctgatgatgcattaccagacggaaaaggaaggggcggacaggctcgaaaacctcgaacag
cttgtctcggcagccatgttgtttctgtctgaagaaggcttctcgcaggaagcgccggca
ctgatgaccgaagcggtcactcctgccggagagaagtcgatgctgaccgtcgatgaagtc
atggatgcggatgtgccgctttccatgatcatgtcgccattgtcggcatttttgacgcac
gcttcactggaagcgggagaaaatcaggcgcaggaagggcaggatgcgctccagctgatg
acggttcactcggccaaggggctggaattcgacgccgttttcattaccggtctggaagaa
gggcttttcccgcatgaaaacagtgccagggaagacggtggtctcgaggaagagcgtcga
ttgatgtatgtcgccattacccgcgcgagaaaacggctctatctgagctatgcgcaaacg
cggatgttgcacggtcatatgcgttataacgtctcgtcacgcttcgtcgccgaattgccg
gacaagacaatgaaatggctgacacctaaaaagcagtcttcatacctcaatccccggcat
gaaccgacagcccgttttgaccagtcatctgtgcctcaaatgcaagcgcctgcttctttt
cataaaaacagtgaatggcggatcggtgaaaccgttattcacaagaaattcggtgaaggc
gtgattgtcggtcttgaagggcagggagcgaatgtccgggcgaatatcaatttcgggcgg
catggaatgaaattgcttgatctttccattgccaagcttgaacacgcttcgtga
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