Oxalobacter formigenes: BRW83_1259
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Entry
BRW83_1259 CDS
T04835
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ofo
Oxalobacter formigenes
Pathway
ofo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ofo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BRW83_1259 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ofo03400
]
BRW83_1259 (nfo)
Enzymes [BR:
ofo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BRW83_1259 (nfo)
DNA repair and recombination proteins [BR:
ofo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BRW83_1259 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ARQ46003
LinkDB
All DBs
Position
complement(1335562..1336395)
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AA seq
277 aa
AA seq
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MFNIGCHLSVSKGLFRMGKDALSIGANTFQCFLRNPRGGAAKKLDLADGLALKQLMDENG
FAPIVVHAPYTLNACAKDERLRDFAFETILDDISRMALLPGNLYNFHPGSHVGQGIGKGI
ELIIDLLNRVLETGPEPTLLLETMSGSGSEVGSRFEELKAILDGCGNHPKTGVCLDTCHV
WSAGYDVVNRLDDVLEEFDSVIGLKHLHAIHLNDSLMPFGSHKDRHATIGEGTIGIDAIT
RIINHPVLKNLPFCLETPNELPGHAEEIALLKSLYRD
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatatcggctgccatctctctgtttcaaaaggtcttttccggatgggaaaggac
gcgctttccatcggcgccaatacctttcaatgctttttgcgcaatccgcgtggcggtgca
gcaaagaaactggacctggccgacggtttggccttgaagcaattgatggacgaaaacggt
tttgctccgatcgtcgttcacgccccctataccctgaacgcctgcgccaaagacgagcgc
ctgcgcgactttgcctttgaaaccattttagacgacatcagccgcatggcgcttcttccc
ggcaacctgtacaacttccatccgggcagccatgtcggacaggggatcggcaagggaatc
gaactgatcatcgacctgttgaaccgggtgctggaaaccggtcccgaaccgacgcttttg
ctggaaacgatgtccggatcgggcagtgaagtcggcagccgcttcgaagaattgaaagcc
atcctagacggctgcggcaaccatccgaaaacaggcgtctgtctcgatacctgccacgtc
tggtctgccggttacgacgtcgtcaaccggcttgacgacgtactggaagaattcgattca
gtcattggtctgaagcatctccatgccatccacctgaacgacagcctgatgcccttcggc
agccacaaggacagacacgcgacaatcggggaaggcaccatcggcatcgacgcgatcacc
cggatcatcaaccatcctgtattgaaaaacctgccgttctgtctggaaacgcccaacgaa
ctgccgggccatgccgaagaaatcgccctgctgaaaagcctttaccgggactga
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