Oxalobacter formigenes: BRW83_1402
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Entry
BRW83_1402 CDS
T04835
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ofo
Oxalobacter formigenes
Pathway
ofo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ofo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BRW83_1402 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ofo03400
]
BRW83_1402 (recB)
Enzymes [BR:
ofo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BRW83_1402 (recB)
DNA repair and recombination proteins [BR:
ofo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BRW83_1402 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ARQ46145
LinkDB
All DBs
Position
1474053..1477793
Genome browser
AA seq
1246 aa
AA seq
DB search
MSFPEEFDVFNCPLSGRILIEASAGTGKTWNIGGLYLRLLLEKQLEVKQILVVTFTRAAT
AELRDRIRGRIAKALSYLNGVDDLADDTFLLELLGRQLETGNTHAELTSRLQLAFESFDQ
AAIFTIHSFCQRALATTAFSAGVAFTVRTETVDEEMVLEAVQDFWRRHIANGHLSAAFSA
WLEKKRVTPEKLMLLLRRHLRKPLAHVLWPDEIGAAGNQDDNPQASGLETAFHEARVCWH
TRREEVLEIMMSSSADLNQQRYKPSAIESAFGAFDRLFATGDPLGMVDSVGKTELLTTSK
LLASTKKDRTTPKHLFFGLAEKLVIECQQTEADLSMAWMRLLKRFLEETVALLKAKKQEK
RVVAFDDMLIDLYKALHNPELPWLPDVLRQQFPAALIDEFQDTDPLQYAIFRSIYGESDL
PVFMVGDPKQAIYSFRNADLHTYFAARSEVDYHYTLPENHRSTAGLIEACNTVFSVNSRA
FLQSGLDFLPVRNGNRERPELLDLSETESEASLTIWRLPDENGEWIERTKAKERAIEATA
DEIARLLNASAKGKLTIGEKPVCAGDMAVLVRSHREASMVGNALSRRGIGSVSLSHESVF
LSREARELECILAALLSPGSESLLKAALSTEMLGFNAGEMDVLSNDEARLSDCFERFEQY
RNSWISNGIGYALRFLMDREGIVKRLLALPDGERRMTNLMHLAELLNRESENNDAPDALL
RYLAEKRESDKTGEEEELRLETDRNLVQIMTVHRSKGLEFAFVFCPLLWDGYSRRMPNAL
EGIEYHDNEKLVIDFREMDKETSQAIKNDQAIETAAESLRLIYVALTRAVYRCYLVAGCY
SRSNAKLKTAESQRSLLNWLVAGNGCSPDEWFLWDNRKKEDEIAAGRNAIEEAWKALEGR
CRDIVLSDLPENRGVSLTETENGHDTLAAKTFNGRIVSRWRMNSFSGLMRNAVELDESGD
HDEYVVAETDGSVVMETAQPELSTIDADDILLFPKGTFAGSCLHAMFENADFTDRESWNT
AIESALQQFPQTAEVITVEDGKNSYPDLKAMARRMMEDVLNTLLGDGIVLSSIPNEKRLT
ELPFCLSEAPVSAKSLNALFKRFDYPVPQLVFDDMNAFLNGFIDLVFEHEGRFYVLDWKS
NVLGTNREDYGPAPVAMAMAEHGYHWQYLLYTVALHRFLSLRLPGYDYDRHMGGALYLFI
RGVRPQWSNEDGTPSGVFFDKPDRSIIEAIDSLLKPAGMKNRENAP
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgagttttcctgaagaattcgatgttttcaactgccctctttcaggccggattctgatc
gaagcctcagcggggactggcaaaacctggaatatcggaggcctgtacctgcgtttgctt
ctggaaaagcaactggaagtgaagcagattctcgtcgtgacattcacaagggcggcaacg
gcggaattgcgcgaccgcatccggggaaggatcgcaaaagcgctctcttacctgaatggc
gttgatgatctggcggacgataccttcctgctggaactgctcggcaggcagcttgagacc
ggtaatacgcacgcggaattgaccagtcgcctgcaactggcgttcgagtccttcgatcag
gcggcgattttcacgattcacagtttttgccagcgggcactggcgacgacggcgttttct
gccggcgtcgcgtttaccgtcaggactgaaacggtcgacgaggaaatggtgctcgaagcc
gtgcaggatttctggcgacgccacatcgccaacgggcacctgtccgccgctttttcggca
tggctggaaaagaaacgggtcacgccggaaaaactgatgctgcttttgcgaaggcatttg
agaaaaccgctggcacatgtgctctggcccgatgaaatcggggctgccggaaatcaggat
gacaatccgcaggcgtctggtctggagacggcgtttcacgaagcaagagtatgctggcac
acccgtcgtgaagaagtgcttgaaatcatgatgtcttcttctgccgatctgaatcagcag
cgttacaagccttctgcgattgaaagtgccttcggtgctttcgacaggctgtttgcgacc
ggcgacccgcttggaatggttgacagtgtcggcaaaacggaactcctgacaacgtcgaaa
cttctcgcctcgaccaaaaaagacaggacgacgcccaagcatcttttcttcggactcgcg
gaaaagcttgtgattgaatgccagcagacagaagctgatctttcaatggcctggatgcga
ttgttaaagcgatttcttgaagaaacagtcgctttgctgaaggcaaaaaaacaggaaaaa
cgggtggtcgctttcgacgatatgttaatcgacctgtacaaggccttgcataatcccgaa
ctgccctggttgcccgacgtgctcaggcagcaattccctgccgctctgatcgatgaattt
caggataccgatccgttgcaatatgccattttccgttcgatttatggcgaatcggacttg
ccggttttcatggtaggcgatccaaaacaggcgatttacagtttccgcaacgccgatttg
cacacgtattttgcagcccgttccgaggtcgattatcactacaccttgcctgaaaatcac
cgatcgactgctggcctgatcgaagcctgcaatacggttttttccgtcaattcacgggcg
tttctccagtctggcctcgattttctgccagtcagaaacggaaaccgggaacggcctgaa
ctgcttgatttgtctgaaactgaatcggaagccagtctgacaatatggcgcttgcctgac
gaaaacggcgaatggatagaacgtaccaaagcaaaagaacgcgctatcgaagcgacggcc
gatgaaatcgctcgccttttgaatgcgagtgcaaaaggaaaactgacgattggcgagaag
ccggtttgtgccggggatatggcggttctggtcaggagccaccgggaagcgtctatggtg
ggcaatgccttgtcacgccgtggcatcgggagtgtctcgctttctcatgagagtgtcttt
ttgtcccgggaagcgagggaactggaatgtattctggcagcccttttgtcgcccggcagc
gagtctttattgaaagcggctctctcgactgaaatgctcgggttcaatgcgggagaaatg
gacgtcctttcaaacgatgaagcccggttgtcggactgcttcgaacggttcgaacaatac
cgcaacagctggatttccaacggcatcggctatgcattgcgtttcctgatggatcgggaa
ggtattgtgaagcggcttctggccttgcctgacggtgaaaggcgcatgacgaacctgatg
catctggctgaactgttgaaccgggaaagcgaaaacaacgatgcgccagacgccctgctc
cgctatctggctgaaaaacgcgagagcgacaagacgggtgaagaggaagaattacggctt
gaaacggatcgcaatctggtccagattatgacggttcaccgttcgaagggactcgaattc
gcttttgttttctgtcccctgctctgggacggctattccagacggatgccgaatgctctg
gaaggcatcgagtatcacgataatgaaaagcttgtgatcgatttcagggaaatggacaag
gaaacgtcacaggcgatcaaaaatgatcaggcgattgaaacggcggctgaaagcctgcgt
ctgatttacgtcgcactgacccgtgcggtgtatcgctgttatctggtcgcgggctgttac
agccgttcaaacgcaaagctgaaaacggcggaatcgcaacgcagtcttctgaactggctg
gtagccggaaacgggtgttcgcccgatgaatggttcctttgggacaaccggaaaaaagaa
gacgaaatcgctgccggacgaaacgccatagaagaggcatggaaagcgcttgaaggacgt
tgcagggatatcgtgttgtcagatttgccggaaaatcgcggggtgagcctgactgaaacg
gaaaacgggcatgacacgcttgcggcaaaaacctttaatggccggatcgtttcgcgctgg
cggatgaacagtttcagtggcctgatgcgcaacgctgtcgaattggacgagtcgggcgac
catgacgagtatgttgtggctgaaactgacggttctgttgtgatggaaaccgcacaaccg
gaattgtccaccattgacgcagacgacattctgctgttcccgaaaggaacctttgccgga
agttgcctgcacgcgatgtttgaaaacgcggatttcaccgaccgggaaagctggaacacg
gcaattgaaagtgcactgcagcagttccctcaaacggcagaggtgattaccgttgaagat
ggcaaaaacagttaccccgacctgaaggcaatggcaagacggatgatggaagacgtgctg
aatacgcttttgggtgatggtattgttctttcctcgatcccgaacgaaaaacgcctgacc
gaactgccgttttgtctttcggaagcgccagtatcggcgaaaagcctgaatgccctgttc
aaacgttttgattacccggtcccgcaactggttttcgatgatatgaacgcttttctgaac
gggttcatcgatctggtgttcgagcatgaaggccgtttttacgttctggactggaaatcg
aatgttctcggtacgaacagggaagattatggcccggctcctgttgcgatggcgatggct
gaacacggatatcactggcaatacctgctttataccgttgccctgcaccgtttcctgtca
ttgagactgcccggttacgactacgacaggcacatgggaggtgcgctttatctgttcatc
cgtggagtccggccgcagtggagtaacgaagatggaacaccttctggcgtgtttttcgac
aagccggatcgctccattatcgaagcgatcgacagtcttttgaaaccggcgggaatgaaa
aacagggagaatgcgccatga
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