Oxalobacter formigenes: BRW83_1893
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Entry
BRW83_1893 CDS
T04835
Symbol
lcfB
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ofo
Oxalobacter formigenes
Pathway
ofo00061
Fatty acid biosynthesis
ofo00071
Fatty acid degradation
ofo01100
Metabolic pathways
ofo01212
Fatty acid metabolism
ofo02024
Quorum sensing
ofo04146
Peroxisome
Module
ofo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ofo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BRW83_1893 (lcfB)
00071 Fatty acid degradation
BRW83_1893 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BRW83_1893 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
BRW83_1893 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ofo01004
]
BRW83_1893 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ofo04147
]
BRW83_1893 (lcfB)
Enzymes [BR:
ofo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BRW83_1893 (lcfB)
Lipid biosynthesis proteins [BR:
ofo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BRW83_1893 (lcfB)
Exosome [BR:
ofo04147
]
Exosomal proteins
Exosomal proteins of breast milk
BRW83_1893 (lcfB)
Exosomal proteins of breast cancer cells
BRW83_1893 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
UPF0227
Motif
Other DBs
NCBI-ProteinID:
ARQ46633
LinkDB
All DBs
Position
complement(2038101..2039531)
Genome browser
AA seq
476 aa
AA seq
DB search
MNLGTLGEKTEPSKTAFVSLADGIHYTYADLQRISDMVAADLADEFEKGTKIALVGVNSG
AYVATLLGVMKAGMVAVPVNPKLPPLRISDILADSGAQQVFADGELKASLSKTLPVNAFY
TSGNRSFETVVPDDGQPALILYTSGSTGKPKGVVLSHQSHVWTALARVETLSLQDEVTLI
AAPLFHMQALALAFWVLASGGTAVILPRFSTASYLDAIETYRCTFITAVPPMIEAILRDD
GIHLADLSSVRLVRLGSAPVLPGLYQRIAVILPYAAILVGYGTTESGPVTFGAHPDGVPL
PSLSYGYPHPEVDVRLNADSVLEIRSPALMNGYHKRPELSPFTEDGYYVTGDVFRRDDKG
FYAFVGRADDMFVSGGENIYPGEVETLLATHPDVVNSCVVPVDDEIKGTKPVAFVIRHGS
VTEEKLRQHILDRAAPHIHPRRVWFLDSFPVTDTNKIDRRKLMAEAEKRVREKEHA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgggaacgcttggagaaaaaacggagccgtcgaaaacggcatttgtgagcctt
gcagacggcattcattacacctatgccgacttgcagcggatatcggatatggtcgctgcc
gatctggcggacgaatttgaaaaaggcacgaaaatcgcactggtcggggtcaattcgggc
gcttacgtggcgacattgcttggtgtcatgaaagcgggaatggttgccgtgcccgtcaat
ccgaagctgccgcctttgcgtatcagcgacatactggccgattccggagcgcaacaggta
tttgcggacggggaattgaaggcgtccctgtcgaaaacgctgcctgtcaacgccttttat
acatcgggaaaccgttcgtttgaaacggtcgttccggacgacgggcagcccgcgctgatc
ctgtatacgtcaggttcgacgggcaagccaaaaggcgttgtcctctctcaccaaagccat
gtctggacagcgctggcgcgggtggaaaccctgtcattgcaggatgaggtcacgctgatc
gccgcccctctttttcacatgcaggcgctcgcgctggccttctgggtgctggcttcgggt
gggacggcggtgatattgccacggttttcaaccgcgtcctatcttgacgcgatcgaaacg
taccggtgcacgttcatcacggcggttcctccgatgatcgaggccatattgcgtgacgat
ggcattcatctggccgatctttcttccgtcaggcttgtccgtctcggatcggctccggtc
ttgccgggcctttaccagcggattgccgtgatactgccctatgccgccattctggtcggt
tacgggacgactgaatccgggccggtgacgttcggtgcgcatccggacggtgtgccgttg
ccgtcgctttcctatggttatccgcatccggaagtcgatgtccgtttgaatgccgacagc
gttctggaaatccgttctcctgccctgatgaacggctatcacaagcgtcccgaactgtcg
ccttttacggaagacggctattacgtgacgggcgatgttttcaggcgggacgacaagggc
ttttacgcttttgtcggcagggcggatgatatgttcgtgtcgggcggcgagaacatttat
cccggcgaggtggaaaccttgctggcaacgcatccggacgtcgtcaattcctgcgtggtt
ccggtcgatgacgagatcaagggtacgaaaccggtcgctttcgtcatccgtcatggaagt
gttactgaagaaaaactcaggcaacacatactggatcgggcggctccgcatatccatccg
cgcagggtgtggtttctggacagttttccggtaaccgatacgaacaagatcgaccgacgg
aaattgatggcggaagcggaaaaacgggtgagggagaaagaacatgcataa
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