Oxalobacter formigenes: BRW83_2058
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Entry
BRW83_2058 CDS
T04835
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ofo
Oxalobacter formigenes
Pathway
ofo03030
DNA replication
ofo03430
Mismatch repair
ofo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ofo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRW83_2058 (dnaE)
03430 Mismatch repair
BRW83_2058 (dnaE)
03440 Homologous recombination
BRW83_2058 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ofo03032
]
BRW83_2058 (dnaE)
03400 DNA repair and recombination proteins [BR:
ofo03400
]
BRW83_2058 (dnaE)
Enzymes [BR:
ofo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BRW83_2058 (dnaE)
DNA replication proteins [BR:
ofo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BRW83_2058 (dnaE)
DNA repair and recombination proteins [BR:
ofo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BRW83_2058 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
RMI2
Motif
Other DBs
NCBI-ProteinID:
ARQ46796
LinkDB
All DBs
Position
complement(2199673..2203134)
Genome browser
AA seq
1153 aa
AA seq
DB search
MNNTRFVHLRLHSEYSIVDGLVRIEDVIAAAAKDGQPAMALTDLANLFGLIKFYKAARKK
GVKPIGGCDVWITNDADREKPSRLLLLVKDRTGYLNLCELLSRSWLENQWRGRAEIRIEW
LEELSKKTGDMGLIALSGAKQGDIGMAFEASGFDNAEKCARRWASIFPDNFYIEIQRTGH
SGMEQYLRHAVELADKLQLPVVATHPVQFLSQEEFAAHEARTCISEGEILSNKRRAHNFN
ERQYFYTQEEMAELFADLPGAIQNSVEIARRCNLVLELGHHKLPEFPTPDGMTLDEFLTS
EAKHGLEKRLEELFPDEEERKTQRPRYDERLDYEIGTIINMGFSGYFLIVADFIRWAKNN
GVPVGPGRGSGAGSLVAYSLLITNLDPLAYNLIFERFLNPERVSMPDFDVDFCQHGRDKV
IQYVKDRYGKDAVSQIATFGTMAAKAAVRDVGRVLDLGYNFCDGISKLIPFKPGKQVTIA
EAKKEEPLLAEREESEEEVKQLLALAEQVEGITRNVGMHAGGVLIAPGKLTDFCPLYTQG
GEAGVVSHFDKSDVEAVGLVKFDFLGLTTLTILDLAVKYIRQLDPEMANFNLDTIPLDDK
ATYDLLIKAKTVAVFQLESRGMQGMLKDAKPDRFEDIIALVALYRPGPMDLIPDFCRRKH
GEKFEYPDERTKGILSETYGIMVYQEQVMQMAQVIGGYTLGGADLLRRAMGKKDANEMAR
HRQIFRDGAAKNDLTEAKADEIFDLMEKFAGYGFNKSHAAAYALLSYQTAFLKQHHAAAF
MAANMSLAMDDTDKVKVLVEDAVEVCGLTILPPDINHSEYYFTPVGEAPSVSKKPVSAIR
YGLGAVKGSGESAIEAIVKARKERPFTDLFDFCMRVDKHQINRRTIESLIRAGAFDCFNV
DRAVLLASVDLAIEAAEQAEASANQVSLFGEEEAVINTVEYVQVPHWTEKHKLTEEKGVL
GFCLSGHLFNAYAAEARQFAKTRIIELEPSRDPKWVAGVISGNRTQMTQRGKMMIVTLDD
GSGTIEVTIFSELMDQKRPIFKEDEFLAVFGKVSEDRFSGGLRLNADDALDISGSRLHFG
QHISFTLPEKFNLAKLKETITPWQTEDGMQLIADYIVDGNKCRIDFGANCLLGPNDECLN
SLSQQFKDAKVTY
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgaataatacccgtttcgttcatctccgtcttcattcagaatattccatcgtcgatgga
ctggtccggattgaagacgttatcgccgccgctgccaaagacggccagccggccatggcg
ctgaccgatctggccaatcttttcggcctgatcaaattttacaaggcggcacggaaaaaa
ggggtcaaaccgattggcggctgcgatgtctggattacgaacgatgccgacagggaaaaa
ccgtcccggcttctgttgctggtcaaggacagaacaggttatctgaatttatgtgaactg
ctgtccaggtcatggctggaaaaccagtggcgtggtcgggcggaaatccggatcgaatgg
cttgaagagctgtcgaaaaagacaggcgatatgggactgattgccctctctggcgccaaa
cagggcgatatcgggatggctttcgaagcgtccggtttcgacaatgctgaaaaatgtgcc
agaagatgggcctctatttttccggacaacttctatatcgagattcagcgtacagggcat
tccggcatggagcagtatttgcggcatgccgttgaactggcagacaaattgcaattgccg
gtggttgccactcatccggtacagtttttgtcccaggaagaatttgccgcccatgaagcg
agaacctgtatttccgaaggggaaattctttccaacaaacggcgtgcccataacttcaat
gaacgccagtatttttacactcaggaagaaatggcggagctgtttgccgatcttcctggc
gcgattcaaaattcggtggaaattgcccgtcgctgcaatctggttcttgaactgggacat
cacaaattgccggaattcccgactccggatggcatgacactggatgaatttctgaccagc
gaagccaaacacgggcttgaaaagcgactggaagaattgtttccggatgaggaagaaaga
aaaacgcagcgtccacggtatgatgaacgtcttgattatgaaatcggcacgatcatcaat
atgggattttcgggctacttcctgattgtggccgattttatccgctgggcgaaaaacaat
ggcgttccggtcgggccgggtcgtgggtccggggccggatcgctggtcgcttattcattg
ttgatcaccaaccttgatccgctggcgtacaacctgattttcgaacgattcctgaatccg
gaacgtgtttccatgcctgacttcgacgtggacttttgccagcatggccgcgacaaggtt
atccagtacgtcaaagaccgttatggcaaggatgccgtgtcccagattgccacgttcggt
acaatggccgccaaggcggcggtacgtgacgtcgggcgagttctggatcttgggtacaac
ttctgcgatggcatttccaaactgattccattcaaacccggcaaacaggtcacgattgcc
gaagcgaagaaagaggaaccgctgcttgccgaacgggaagaatcggaagaagaagtcaaa
cagttgctggcgctggccgagcaggtcgaaggcattacccgtaacgtcggcatgcacgcg
gggggggtattgattgcgcccggcaagctgaccgatttttgtccgctttacacacagggt
ggagaagccggcgtcgtttcccatttcgacaagagcgatgttgaagccgtcgggcttgtc
aaattcgactttttgggtttgacgaccctgacgattctggatctggccgtgaaatacatt
cgccagcttgatccggaaatggcgaatttcaatctggataccattccgctggacgacaag
gcgacttacgacttgctgatcaaggcaaaaacggttgccgtgttccagcttgaaagtcgc
ggcatgcagggcatgctcaaagatgcgaaacccgaccgtttcgaggacattatcgcgctg
gttgcgctgtaccgtcccggtccgatggatctgataccggatttctgccgccgcaaacat
ggcgaaaaatttgaatatccggatgagcggacgaagggcattctgtccgagacctatggg
attatggtctatcaggaacaggtcatgcagatggcgcaggttatcggaggctatacgctt
ggcggcgccgacctgttgcgtcgtgcgatgggtaagaaagatgcgaatgaaatggcgaga
catcgccagattttccgtgacggtgcggccaagaacgatttgactgaagccaaagcggac
gaaattttcgacttgatggaaaagttcgcaggctatggtttcaacaagtcgcatgcggct
gcctacgcattgctgtcttaccagacggcctttttgaagcaacaccatgccgccgcgttc
atggcagccaatatgtcgctggcgatggacgataccgacaaggtaaaagtgcttgtcgaa
gatgccgttgaagtttgcggtttgactatcctgccgcctgatatcaatcattccgaatat
tattttactccggttggagaagccccaagtgtcagtaaaaaaccggtttcggcaatccgc
tatggtctgggtgcggtgaaaggatcaggcgaaagtgccattgaagcgatagtcaaagcc
agaaaagaaagaccgtttaccgacctgttcgatttttgcatgcgggtcgacaagcaccag
atcaatcgcaggacgatcgagtccctgattcgtgccggggcgttcgactgtttcaatgtc
gatcgcgcggttttgctggcgtcagtcgatctggctattgaagcggctgagcaggcggaa
gcatcggccaatcaggtcagtctgttcggtgaggaagaagccgttatcaataccgttgaa
tatgtccaggttccacactggacggaaaagcataaattgacggaagaaaaaggcgtactg
ggtttttgtctttccggacatctattcaatgcctatgccgctgaagcgcggcagtttgcc
aaaacgagaatcatcgagctcgaaccttcccgcgatccgaagtgggtggccggtgtgatt
tcgggtaaccgtacgcagatgacccagcgtggcaagatgatgatcgttactctggatgat
ggaagcggaaccattgaggtaacgattttttccgaactgatggatcagaaacgtccgata
ttcaaagaggatgaatttcttgccgtgtttggaaaagtgtcggaagaccggttttccggc
ggtttgagactgaatgccgacgatgcgctggatatttctggttcaagattgcatttcggg
caacatatttcattcacccttccggaaaaattcaatcttgcgaaactgaaagagactatc
acaccctggcagacagaggatgggatgcaattgattgctgattatattgtcgatggaaat
aaatgccggatcgattttggagccaattgtctgttgggcccgaatgacgaatgtcttaac
agtttaagtcagcagtttaaagacgctaaagtgacatattga
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