Oxalobacter formigenes: BRW83_2157
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Entry
BRW83_2157 CDS
T04835
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ofo
Oxalobacter formigenes
Pathway
ofo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ofo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BRW83_2157 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ofo03400
]
BRW83_2157 (alkA)
Enzymes [BR:
ofo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BRW83_2157 (alkA)
DNA repair and recombination proteins [BR:
ofo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BRW83_2157 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ARQ46893
LinkDB
All DBs
Position
complement(2316214..2316858)
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AA seq
214 aa
AA seq
DB search
MTDGQTISMLDEGCWDRACAELGMRDPIMQKLIATSGKDRLQTRGEPFQTLARSIVGQQI
SVKAADSIWKRFLLVCPASSPEEIMTASAEMLSAAGLSRRKVEYLKDLAFHFVERKIQAD
QWPDMPDEEIIADLTQVRGIGRWTAEMFLIFNLMRPNVLPLDDVGLLKGISMSYFSGKDI
GKKDVQEIAGKWEPWCTVATWYLWRSLTPLPVEY
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgggcaaacgatttccatgctcgatgaggggtgctgggatcgggcatgcgca
gaattggggatgcgcgaccccatcatgcaaaagctgattgccacctcgggcaaggatcgt
ttgcaaacccgtggagaaccttttcagacactggcccggtcgattgtcggacagcagatt
tcagtcaaggcagcggattccatctggaagcgtttcctgctggtttgcccggccagttct
cctgaagaaatcatgactgccagtgcagaaatgctttccgctgccggtttatccagacgg
aaagtggaatatctgaaagatttggcgtttcattttgtcgagcgtaaaattcaggccgat
caatggcccgatatgccggatgaagaaattattgccgacctgacgcaggttcgcgggatc
gggcgctggactgccgagatgtttttgatattcaatctgatgcggccaaacgtattgccg
ttagacgatgtcggcttgttgaaaggaatcagcatgtcttatttttccggtaaagacatc
ggcaaaaaagacgtgcaagaaattgcagggaaatgggaaccgtggtgtactgtcgcaaca
tggtatttgtggcgcagtttgacaccacttccggtagaatactga
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