Oxalobacter formigenes: BRW83_2174
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Entry
BRW83_2174 CDS
T04835
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ofo
Oxalobacter formigenes
Pathway
ofo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ofo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRW83_2174 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ofo03019
]
BRW83_2174 (pnp)
03016 Transfer RNA biogenesis [BR:
ofo03016
]
BRW83_2174 (pnp)
Enzymes [BR:
ofo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BRW83_2174 (pnp)
Messenger RNA biogenesis [BR:
ofo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BRW83_2174 (pnp)
Transfer RNA biogenesis [BR:
ofo03016
]
Prokaryotic type
tRNA degradation factors
BRW83_2174 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
S1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
ARQ46909
LinkDB
All DBs
Position
complement(2338748..2340889)
Genome browser
AA seq
713 aa
AA seq
DB search
MFNKVSKTFQYGQQTVTMETGEIARQASGAVMVSVDDTVVLATVVAKDDVKPGQDFFPLT
VDYIEKSYAAGRIPGSFFKREGRPSEKETLTSRLIDRPIRPLFPEGYFNEVQVIIHVLSV
NPEVDPDIPSMIAASAALCVSGIPFNGPLGAARVGYIDGQYVLNPTASQLPLSKMDLVVA
GTEQAVLMVESEAEELPEDIMLGAVVFGHEQMKVVIDAIDELVRDGGKPEVEWAPPAKNE
ELIAAVTRIAEPELRKAYQIRQKQARSTELRHIYDNVSKTLAAEAQDKGVSAPDSVEVGN
IMFDLEAKIVRSQILDGEPRIDGRDTRTVRPITIRTGVLPRTHGSALFTRGETQALVVAT
LGTSRDNQKIDALMGEYSDAFMMHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIACL
PSQEEFSYSIRLVSEIMESNGSSSMASVCGGSLALMDAGVPVKNHVAGIAMGLIKEGNKF
AVLTDILGDEDHLGDMDFKVAGTANGVNALQMDIKIQGITKEIMQVALAQAREGRMHILS
KMQEAMPQFKTELSDFAPRLITIRINPEKIRDVIGKGGAVIRGLTEETGAQIDITDDGVV
TIASVDAAAGQEAKRRIEELTASVEVGKIYEGTVLKLLDFGAIVQILPGKDGLLHISQIA
SERVNAVTDYLEEGQAVRVKVLETDDRGRIKLSMKAAAAEENPAPAPAPEAAE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaagtaagcaagaccttccagtatggtcaacaaaccgtgaccatggaaaca
ggtgagattgcgcgccaggccagcggcgcagtgatggtatcggtggacgataccgtcgtg
ctggcaaccgtcgtcgcaaaagacgatgtcaaacccggtcaggattttttcccgctgaca
gtcgattacattgaaaaaagctatgctgccggtcgtatcccgggcagcttcttcaaacgc
gaaggccgtccttccgaaaaggaaaccttaacgtcccgcctgatcgaccgtcctatccgt
ccgctgttcccggaaggttatttcaatgaagttcaggtcatcattcatgtcctgtccgtc
aaccctgaagtcgatcctgacatcccatccatgatcgccgcttccgctgcactgtgcgtt
tccggtattcctttcaacggaccgcttggcgccgcccgtgtcggttatatcgatggccag
tatgttttgaacccaaccgcttcgcaattgccattgtccaaaatggatctggtcgttgcc
ggtacggaacaggctgtgctgatggtggaatccgaagcggaagaattgcctgaagacatc
atgctgggcgcggtcgttttcggccatgaacagatgaaagtcgtcatcgacgccatcgac
gaactcgttcgcgacggtggcaaacctgaagtcgaatgggcgcctcctgccaaaaacgaa
gaactgatcgcagccgttacccgtattgcagaacctgaattgcgcaaggcataccagatt
cgccagaaacaggcccgttcgactgagctgcgccatatttacgataacgtcagcaagacg
ctggcagccgaagcccaagacaaaggtgtaagcgcaccggattccgtcgaagtcggcaat
atcatgttcgatctggaagcgaaaatcgtccgttcccagattctggacggtgaaccccgt
atcgacggtcgcgacacccgtaccgtccgtccgatcacgatccgtaccggtgtattgccc
agaacgcacggttccgccctgtttacccgtggcgaaacacaggctctggtcgttgcaaca
ctgggcacctcccgcgacaaccagaaaatcgacgccctgatgggtgaatacagcgatgca
ttcatgatgcattacaatatgcctccgtttgcaaccggtgaaaccggtcgtgtcggtacc
ccgaaacgtcgtgaaatcggccacggccgtctggcaaaacgtgccctgatcgcctgcctg
ccttctcaggaagaattcagctattccatccgtctggtttccgaaatcatggaatccaac
ggttcttcctcgatggcttcggtttgcggtggcagccttgcattgatggatgccggtgtt
cctgtcaagaaccacgttgccggtattgccatgggtctgatcaaggaaggcaacaagttt
gccgttttgaccgatattctgggtgatgaagatcatctgggcgacatggacttcaaggta
gccggtaccgcaaatggcgtgaacgccttgcagatggatatcaagattcagggcattacc
aaggaaatcatgcaggttgcactggctcaggccagggaaggccgcatgcacatcctttcc
aagatgcaggaagccatgccgcagttcaagaccgaactgtcggacttcgcgccacgcctg
atcaccatccgtatcaatcctgaaaaaatccgtgacgttatcggcaagggcggtgccgtt
atccgtggcctgaccgaagaaaccggggcacagatcgacatcaccgacgacggcgtcgtt
accattgcatcggttgatgccgctgccggtcaggaagccaaacgccgtatcgaagaactg
accgcttctgttgaagttggcaagatctatgaaggcacagtcttgaaattacttgatttc
ggcgctattgttcagatattgccaggcaaggatggcctgctgcatatcagccagatcgcc
agtgaacgagtcaatgccgtcaccgattatctggaagaaggacaggccgttcgcgtcaag
gttcttgaaacggacgatcgcggtcgtatcaaattgtcgatgaaggccgctgccgctgaa
gaaaatcctgctccagcaccagctcctgaagcagcagaataa
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