Oxalobacter formigenes: BRW83_2219
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Entry
BRW83_2219 CDS
T04835
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ofo
Oxalobacter formigenes
Pathway
ofo00300
Lysine biosynthesis
ofo00470
D-Amino acid metabolism
ofo01100
Metabolic pathways
ofo01110
Biosynthesis of secondary metabolites
ofo01120
Microbial metabolism in diverse environments
ofo01230
Biosynthesis of amino acids
Module
ofo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ofo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BRW83_2219 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BRW83_2219 (dapF)
Enzymes [BR:
ofo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BRW83_2219 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
PriS_C
DUF4514
Motif
Other DBs
NCBI-ProteinID:
ARQ46951
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All DBs
Position
2388926..2389789
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AA seq
287 aa
AA seq
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MKLKFTKMHGAGNDFIVLNAIDQVINLTREQYRFLADRRYGIGADQILLVEKPDNPEVDF
KYRIFNSDGGEVEQCGNGARAFAKFVTESGLSRQNPIKVETRVGIIELHLEKDGSVTVDM
GNPVFETSRIPFLTKGLTSDEIGSDTIWNLILDTGGIKKSIPISVVSMGNPHAVQIVDDV
NRAAVAEEGPLIENHERFPERVNAGFMEIQDRHSIKLRVYERGAAETLACGTGACAAVVS
GIRRKLLDSPVTVKARGGELKIAWEGEGHNVIMSGPAIIVFNGEINL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaattcacaaaaatgcatggtgcaggaaacgatttcatcgttttgaatgcc
attgatcaagtcatcaatctgacccgggagcaatatcgttttctggccgacagacgctac
ggcattggtgccgatcaaattctgctcgtcgagaagcctgataatccggaagtcgatttc
aaataccgcattttcaattccgatggcggtgaagtcgaacagtgcggaaacggcgcacgg
gcatttgcaaagttcgtgactgaatccggtttgagccggcaaaacccgatcaaagtcgaa
accagagtcggcattattgaattgcatctggaaaaagatggcagtgtcaccgtcgatatg
ggaaatcctgttttcgaaacgtccagaattccttttctgacaaagggactgaccagcgat
gaaatcggttcagacactatctggaatttgattctggatacaggaggcatcaaaaaatcc
ataccgatatcggttgtttccatgggtaatcctcatgcggttcagatcgtcgacgatgtc
aatcgtgctgctgttgccgaagaaggtcccctgatagaaaatcatgaacgttttccggaa
cgcgtcaatgccggttttatggaaattcaggacaggcattccataaaactgcgtgtatac
gaaagaggtgctgcagaaacgctggcatgtggaacgggagcctgtgcggcagtcgtttcc
ggaattcgaagaaaactgctggactcgcctgtgaccgtcaaggcacgcgggggagaattg
aaaattgcctgggagggtgaaggacataatgtcataatgtccggaccggcaattatcgtt
tttaatggcgaaatcaacttgtga
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