Ostrinia furnacalis (Asian corn borer): 114349589
Help
Entry
114349589 CDS
T07986
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03013
Nucleocytoplasmic transport
ofu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114349589
03015 mRNA surveillance pathway
114349589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ofu03019
]
114349589
Messenger RNA biogenesis [BR:
ofu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
114349589
mRNA cycle factors
P-body specific factors
114349589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
HA
HEAT_EZ
Fic_N
DUF1127
Motif
Other DBs
NCBI-GeneID:
114349589
NCBI-ProteinID:
XP_028155805
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MTTVDKETENNDTPENEAENTEESERSALHEYITNLEARIKQKSEMRQQNLNCVRPPDNH
FSKLDSGLKKNTTFVKKLKSFSATQMDALLKDFSALNLTKYISEVASAIAEAKMKMSDIP
AAINLCSALHRTYAEFSSNFFENWQKILTFKATDKIANSSKLRVDIRFYAELVAVGIFAN
KTGLPLLGNVLTVLINMDKEEHNNIPILLSFCKHCGEDYAGLMPKKIRDASEKYNITVPR
NTFLPAEKQAVVRTLLKDYFNSLTKHLMAERAQLQALHAANQRTLHTRGELSQERKDQLE
QHQATYDKLLMGAQNFAEVLGEELGEAGEPPTLTLTVTETQGTVTIGGTEEFNMQAGTDP
WQDEDTRTFYTSLPDLKVFMPNYQLKEPVKSKSSESTETVTEEMLDEDLKEDELSDGEEP
PTVPDVEQEDTQPANISNKYALDVFLNELPNCINRELIDNAAVDFVLNLNTKNNRKKLTR
VLFSVARTRLDLLPFYSRFAAILYPVLPDVCVDLCQMLKQDFRYHVRKKDQINIESKIKV
VRFIGELVKFGLYSKMEALYCLKVLLHDFKHHHIEMACNLLETCGRYLYCNPDTHQRTMI
YLQQMMRKKTVSALDSRYVTQIENAFYYVCPPEAPAQPKEEEPPMHQFIRKILHEDLQKS
NEEKILRLMRKLNWDDPDISAIAITHLAGGWRVRASARRALARLTAELAAWQEAVAPAVV
DTILEEIRVTMEDPHPRYNQRRIATVRYLGELYNYKLLDSRDVFTVLYSFITLGATRDPG
NVSPLDPPDNVFRIRLVCALLETCGAYFNSGSSKKRLDYFLTFFQSYYWVKYSDPYWNDD
NKFPIYVKYIYQECLTTLRPKLTLYTSWQQCKDAIEDLRQVLYPELGEEEQYDNEDQGDD
SVNDGLDTIIETDDETDNPQLPEESSDEEPITENTGNDENEGSGDPDDITIEARRPAPKP
VEDVEFESAFEKMVMENIAERQRENRPQQRDIAVPMTCRQTTKKTYEQLLQGKEGVEFVL
MVRKGTKPQYKSFNAPPELASNLQQQALADKQEMERVKRLTLNISERQEEEEYSAESGGG
SGGIGNPNRGQHVRQKYQHPKGAPDADLIFGPKKFK
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgttgataaagaaacggagaataatgatactccagaaaatgaagcggaaaat
acagaagaaagtgaacgaagtgcgctccacgaatacattactaacctggaagccagaatc
aaacaaaaatcggaaatgcgacaacaaaacttgaattgtgtgagaccaccggataatcat
ttctctaaactagattccggtttaaagaaaaatactacttttgtgaaaaaactaaaatcg
ttcagtgctactcaaatggatgcacttctcaaagattttagtgctttaaatttgactaag
tatatttcagaggtagcttctgctatagctgaggctaaaatgaagatgtctgatatacca
gcagctataaatttatgttcagctcttcatcggacttatgctgagttttcatcaaatttc
tttgaaaactggcaaaaaattttaacgtttaaagctacagacaaaattgccaactcatct
aaactgcgagtagatatccgattttatgcagaactagtggcagtaggtatatttgctaat
aaaactggcttacctttgctgggaaatgtacttacggtacttattaatatggataaagaa
gagcataacaatataccaattttgttatccttttgcaaacactgtggagaagattacgct
gggcttatgcctaaaaaaataagggatgcttcagagaaatataatattacagtaccaaga
aacacattcttgcctgcagagaaacaggcagtggtgagaactttactcaaagactacttt
aattctttgaccaagcatttgatggctgagagagcacaactgcaggcgctccatgcagcc
aaccagagaactctccatactcgtggtgaactgtctcaagagagaaaagatcaattagaa
cagcatcaggctacatatgacaaattactaatgggagcccaaaactttgctgaagtgttg
ggagaagaattgggtgaagcgggtgaaccacctaccctcactctcacggtgactgaaaca
caaggaactgtgactataggaggcactgaagagttcaatatgcaagctggaacagaccca
tggcaggatgaagataccagaacattttatactagtttacccgatttaaaggttttcatg
cccaactaccaactgaaggagcctgtaaaaagcaagagcagtgaaagcactgagactgtc
actgaagaaatgctagatgaggacctgaaggaggatgaactaagtgatggtgaagaacct
cccacagttccagatgtggaacaagaagatactcagccagctaatatctctaacaaatat
gccttggatgtctttctaaatgagttgccaaactgcataaacagggagcttattgacaat
gcagcagtcgacttcgtactgaatctcaatacaaagaacaaccgtaaaaaactcacaagg
gttttgttcagcgtagctcgaacaaggcttgatctcttgccgttctactctagatttgct
gctatactctatcctgtactgcccgatgtctgtgttgatctctgccaaatgctaaaacaa
gatttcagataccatgtcaggaaaaaggatcaaatcaacattgaatctaagattaaagta
gtgaggtttattggtgaattggtcaaatttggattgtactccaaaatggaagcattgtat
tgcttaaaagtacttttacatgacttcaagcaccatcatatagaaatggcatgtaaccta
ctagaaacgtgtggtagatatttatactgtaatccagacacacaccaaagaacaatgatc
tacttacagcaaatgatgaggaaaaagactgtttcagccctagactcgcgttatgtaacg
caaattgaaaatgcattttattacgtttgtccacctgaagcgcctgcccaacccaaggaa
gaggagcctcctatgcatcaattcatacgtaaaatacttcatgaggacttgcagaaaagc
aatgaagagaaaatcctcaggttgatgcgaaaactaaactgggatgatccagatatatcg
gccattgcaataacccatttggctgggggatggagagtcagggctagtgccagaagagcc
ctcgcgcgtttgactgcagaactggcagcttggcaagaagcagtggctcctgcagttgtc
gacactattctggaagaaatacgcgttacaatggaagacccccatcctagatacaatcaa
agaaggatagccactgtcagatatctaggggagttgtacaattacaaattactggactcg
cgcgatgtgttcactgttctgtattcattcattactctgggcgcaactcgcgatcccggt
aatgtctctcctctcgatccaccagacaacgtgttcagaataagactcgtttgtgctttg
cttgaaacttgtggcgcttacttcaacagcggatccagcaaaaagagattggattacttc
ctgactttcttccagagctactattgggtgaagtattcagatccttactggaatgacgat
aacaagttcccaatttatgtaaagtacatttatcaagaatgtctgaccaccttgaggcct
aaattgactttgtatacgagttggcaacaatgtaaagacgcaatagaggatctgaggcaa
gtgttgtaccctgaattaggcgaagaggaacagtatgataatgaagatcaaggagacgac
agcgtcaatgatgggttggatacgataatagagacagatgatgaaacagacaatccacag
ttgcccgaggagagctcggatgaggagcctataactgaaaatactggtaacgatgaaaat
gaaggttcgggagatcctgatgatatcactatagaagcgagacgacctgctccaaaaccg
gtcgaggacgtcgaatttgagtctgcttttgagaaaatggtaatggagaacatagcagaa
agacaacgcgagaatagacctcagcagcgtgacatcgccgtgcccatgacttgccgacag
actactaagaagacttatgaacagttactgcaaggcaaagaaggagttgaatttgtgtta
atggtcagaaaaggcacgaaaccgcaatacaagtcatttaacgcgcctcctgaactcgcc
agcaatctgcaacagcaggcgttggcagataaacaggagatggagagagttaaacggttg
acattgaacatctccgagaggcaagaagaggaagagtacagcgctgaaagtggcggagga
tcaggcggtattgggaatcccaacagagggcagcacgtgcgtcaaaagtaccaacacccg
aagggagctcccgacgccgacctcatatttggacccaaaaaatttaaatga
DBGET
integrated database retrieval system
