KEGG   Ostrinia furnacalis (Asian corn borer): 114349634
Entry
114349634         CDS       T07986                                 
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
ofu  Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ofu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114349634
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ofu03019]
    114349634
Messenger RNA biogenesis [BR:ofu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     114349634
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     114349634
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 114349634
NCBI-ProteinID: XP_028155891
LinkDB
Position
Unknown
AA seq 309 aa
MAGLLLSETEKVFILHGVQDDYRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV
GVKTEIDVPKPEKPDSGKLEFFVDCSANATPEFEGRGGEQLASSISNLMQRAYHSSQAFN
LKQLCIFEGKQCWKLYIDILILECGGNLCDAVSLAVKAALFNTRIPFVKAALMDGGNVDL
QLSDDPYDSKLLNVGSAPLLVTLCKIGDRCVVDPSAEEESCSVISLIVGVTGNEQYYARD
EDTNVKTIEGKCTTIAMNGPGSVAPKTLKDAINQGIMAAKSLDEALGHALLRERQENVGL
KKHSYGFLK
NT seq 930 nt   +upstreamnt  +downstreamnt
atggcagggttattattaagtgaaaccgaaaaagtgtttatacttcatggagttcaggat
gactatcgttcagatggtcgatcaaatatcgactaccgacctatggaactggaaaccgac
gtggtcagccatgccagcggttcagctaggctgcgactagcgaacacagacattctagtt
ggtgttaaaacagaaatagacgtgcctaagcctgaaaaaccagattcagggaaattagaa
ttctttgtggattgttcagccaatgctacgccagagtttgaaggtcgaggtggtgaacag
ctggccagtagtatatcaaacctgatgcaaagagcataccactcttcacaagcattcaac
ttgaaacagctttgtatatttgaggggaagcagtgttggaaattgtacattgatatcttg
attctagaatgtggaggcaacctgtgtgatgcagtatcattagcggtcaaagcagcacta
ttcaacacaaggatacctttcgtaaaagctgctctgatggacggtgggaatgtagaccta
cagctgtcagacgatccttacgacagcaaactgttaaatgttggctctgcaccattactg
gtaacactatgtaaaataggtgacagatgtgtagtggacccatctgcagaagaagagagt
tgcagtgttatatctctgattgtgggtgtgactggaaatgaacagtattatgccagagat
gaagacacaaatgtcaaaacaatagaggggaaatgtaccacaatcgccatgaatggacca
ggcagtgtcgcaccgaaaactttgaaagatgctattaatcagggaataatggcagctaaa
tcgctcgatgaagcgttaggacacgcactattgagggagagacaagaaaatgtaggcctc
aaaaaacattcttatggattcttaaaataa

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