Ostrinia furnacalis (Asian corn borer): 114349959
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Entry
114349959 CDS
T07986
Name
(RefSeq) probable DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114349959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ofu03400
]
114349959
DNA repair and recombination proteins [BR:
ofu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
114349959
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
114349959
NCBI-ProteinID:
XP_028156360
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MSKRNSAGASNTLFNYFTKTPPANKKVKANDDAGGSPKLDSSVNKEKDKKTEKKKRERQP
TPSPEVNNHDSDEEVPIASKRRKRIRLNPMDSDDSDVENKADNKVEEKEKVSLEKKLQDS
FKYEPNQSPKASKAKAKTPSSKGPAATPSKSEAQEESTSDEGNWTHCKLEWLKPEKIRDA
KKRRPNHPDYDPSTLFVPPDFMNEQTPAHRQWWEMKSSHFDCVLFFKVGKFYELYHMDAA
VGVNELGFSYMKGAFAHSGFPESAYSRMASTLVSKGFKVARVEQTETPDMMQDRCKKMGH
STKWDKVVRREICQVAVRGAQVCGLQDAGPADAGASYMMAIAEEEGASCSQFGVCFLDTS
IGIFHLGQFQDDKHSSRLLTTLAHYPPVLVIYDRKSTTPRVSKLLSTHCHSARREPQSLW
PPEKTLKILAEKYYKTNADGDWPEGIKPYLHEGDALGLTPAAHCSLAIKALGGCVSYLTD
CLLDIQILGMSQFETYAPPDVLNKTLSQEEKAENRWEGGNTMVLDAITLRNLRIVQDDGC
LYEKLNFCSTAMGKRWLYQWVCAPSCSLAVIRERQEAVKCLFENQELCQEAKNILTTLPD
LERLLAKVHALGNLKRSKHHPDARAIFYEEKTYSKRKVLDFISVLNGFTAALKLIELFED
VESGLLKRITQFSPDGKFPDYRDTLKFFKEAFNQKEAEKEGRILPGEGVDQEYDNTLRLI
GDIEKELKEYLSEQEKYFKCRLSYVGSDKKRYQIEVPQGAASRAGGDYQLEGTRKGYKRF
STAETKDLLARMIAAEDQKTSVLKDLSRRIFEKFSSTYDQWESAVKCISTLDILLSFTEF
ARQQSGDICLPEVTFDSNQKPYINITEGRHPCIPIVNDFIPNDTKLGVDGASLLLLTGPN
MGGKSTLMRQVGLLTVLAHLGSYVPAQECRLSLVDRIFTRLGASDDILSGQSTFLVEMNE
TAAIVKHATTHSLVLLDELGRGTSTYDGTAIASGVCAELARRGPRTVFSTHYHSLVQHFA
ADPGVLLGHMACMVETDESTADNEDHIPEETITFLYKLSPGACPKSYGFNAARLAGIPKE
ITRRAHQVSKNLEKEATCVRAFRDLIKMSDVKEMRQLLASLSI
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgaaacagtgctggagcatctaatacgcttttcaattattttaccaaaaca
ccgccggcgaacaagaaagtcaaggcgaatgatgatgccggcggcagtcctaagttagat
tcctcggtaaacaaagaaaaagataagaaaacggaaaagaaaaagcgcgaaaggcagcca
accccttcgccagaggtgaacaatcatgacagcgatgaggaggtgccgattgcctcaaag
aggaggaagaggatcaggctcaaccccatggattctgatgactcagatgttgagaataaa
gcagacaacaaagttgaagagaaggagaaagtttctttggagaagaagctacaggatagc
ttcaaatatgagcccaaccaatccccaaaggctagtaaggccaaggccaagacacccagc
agtaaaggaccagcagcaaccccaagcaaatcagaggcacaagaggaatccacatcggat
gaaggcaactggacccactgcaagctggaatggctgaagccggagaagatcagggatgca
aagaagcggagaccgaaccatcccgattacgaccccagcacattgtttgtgccgcccgat
tttatgaatgaacagactcctgcccaccgccagtggtgggaaatgaagtcttcccacttt
gactgtgtgctgttcttcaaagtgggcaagttttacgagttgtaccacatggatgcagct
gtgggagttaatgaactgggattctcttatatgaagggagcatttgcccattccgggttc
ccagaaagcgcgtattcccgcatggcctccacactagtgtcaaaaggattcaaggtcgcg
agggtggagcagaccgaaacgccggatatgatgcaagacaggtgtaagaagatgggtcac
agcacaaaatgggacaaggtggtgcgtcgcgagatatgccaggtggcagtgaggggagct
caagtctgcggcttgcaggacgccggcccggccgacgcgggcgcttcgtatatgatggcc
atcgctgaggaggaaggtgcgagctgcagccagttcggcgtgtgttttctggacacttcc
atcggcatcttccacctgggccagttccaagacgacaagcactcctcgcgactgctcacc
acactggctcactacccgcctgttctggtaatctacgaccgtaaaagcacaacgcctcgc
gtgagcaaactgctcagcacacactgtcatagcgcgagacgcgagcctcaatccctatgg
ccgcctgaaaagactctcaagatactcgctgagaaatattacaagaccaacgccgatggc
gactggccggagggaatcaaaccttatttgcatgaaggcgacgccctaggcctcactccg
gctgcccactgctcactagcaatcaaagcattaggcggctgcgtctcatacctaacagac
tgtttactagatatacaaatactaggcatgtctcagttcgaaacctacgctccgcctgac
gtgctaaacaagaccttatcgcaagaggagaaagctgaaaatcgatgggaaggcggcaac
acgatggttttggacgcgatcacgctaaggaatctgaggatagtgcaggacgatgggtgt
ttgtacgagaaattgaacttctgttccacggctatggggaaaagatggttataccagtgg
gtgtgtgcgccaagctgtagcctggccgtgatcagagagcgccaggaggcagtcaagtgc
ctgtttgaaaaccaagagctgtgccaagaggccaagaacatcttgaccactctgccagac
ctggagaggcttttggccaaagtccacgccctaggcaacttgaaacgttcaaagcaccat
ccagatgctcgcgccatcttctacgaagagaagacctactccaaacggaaggttctggac
ttcatatcggtgttgaacgggttcactgctgctctgaaattgattgagttgtttgaagat
gtagaatcgggactgttgaagagaatcacacagttcagtcctgatgggaagttcccggat
tatagggatactctgaagttcttcaaggaagccttcaaccaaaaggaagcggagaaagaa
ggccgaatactgcccggcgaaggagtggatcaagagtacgacaacacgctgcggctcatc
ggcgacatcgagaaggaactcaaggaatatctcagtgagcaggagaaatattttaagtgt
cgactttcctacgtggggtcagacaagaagcggtatcaaatcgaagtcccgcagggcgcc
gcgagccgtgccggtggcgattaccagttggaaggcaccaggaaagggtacaagaggttc
tctactgctgagactaaggatttgctagcccgcatgatagcagccgaagaccagaagacc
tcagtactaaaggatctaagtcgcagaatattcgagaaattctcctcgacttacgaccaa
tgggagtcggccgtcaagtgcatatctacattagacatactactatcgtttacggagttc
gctcgccaacagagcggcgatatatgcctgcctgaagtcacctttgatagtaatcaaaag
ccgtacataaacataacagaagggcggcacccatgcattccgatcgtgaacgatttcatc
ccgaacgacaccaagcttggagttgatggtgctagcctgctgctgcttaccgggcccaac
atgggaggaaagtcaaccctcatgaggcaggtcggcttgctgaccgttcttgcacatttg
ggtagctacgtgcctgcgcaagagtgccgcttgagcttagtagaccgcatcttcactcgg
ctgggcgcgtccgacgacatactgtcgggccagtccaccttccttgtggagatgaacgag
acagccgccattgttaaacatgccactacacattcattggtgctacttgatgaactgggg
cgaggaacttcgacatacgacggcacggcgatagcttcgggcgtgtgcgcagaattggcg
cgtcgcgggcctcgcaccgtgttctcgacgcactaccactcgttggtacagcacttcgcg
gcagaccctggcgttttgttgggccatatggcctgcatggtcgaaacggacgagtcaaca
gccgacaacgaagaccacatccctgaggaaaccataaccttcctatacaagctgtcccct
ggcgcgtgtccaaaatcctacggtttcaacgcggctcgtctcgctggaatccctaaggag
ataaccaggagagcgcaccaggtatctaaaaacctggagaaggaagccacgtgcgttaga
gccttcagagatctgatcaagatgagtgatgtcaaagaaatgaggcagcttttggcttct
ttgagcatttaa
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integrated database retrieval system
