Ostrinia furnacalis (Asian corn borer): 114350233
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Entry
114350233 CDS
T07986
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ofu03021
]
114350233
03036 Chromosome and associated proteins [BR:
ofu03036
]
114350233
Transcription machinery [BR:
ofu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
114350233
Chromosome and associated proteins [BR:
ofu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
114350233
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
HHH_3
SH2
HHH_9
Spt6_S1
Tex_N
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
114350233
NCBI-ProteinID:
XP_028156739
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MADFFDSEAEESGLSEDDEQPTERKKVKRKAQVQSDDEDEDEEDDEDRLREELKDLIDDA
PIDESGSDGEDSDEGPTKKRKKSDDELDDRLEDEDYDLIEENLGVKVARNKFKRLRRLED
DDSDNEGADDPDLEREVIAEKLFVGGSDEEDENRSEAAAHHQQAQAEYDDDNEDMESDAD
DFIVDDDGRPIAERKKKRKPIFTDASLQEGQDIFGVDFDYDEFEKYGDEDYEDEDEEDLD
EYIEDEEDDGERRRTKKGKPKRPSKKSIFEIYEPSELKRSHFTDLDNEIRKLDVPERMQI
REVPITAVEEGSTELEDEAEWIYKQAFLKAPVSKADSQEARERSRRGSSTITKIRQALDF
MRNQTLEVPFIAFYRKEYVQPELNINDLWKVYKYDAKWCQLKQRKENLLKLLENMREYQL
DKVMENPDAPIPDTMRLIRDEDIERLKNVQTSEELRDVHTHFLLYYSHDLPEMQKVQRVK
EKKRELDEKKKIAREEAEKNGEDPEEAAAEVEARASEEEDHPCDVKYAVRSGPYELCRKA
GIEPLVKKFGLTPEQFAENVRDNYQRHEVEQQPVAPLEAAAPYALATGSAAEVVRRAVYM
CGVQLAREPLLRSTLRDALRERATLTVRPTARGMKEIDENHPCFGLKYLKKKPVRDLTGD
QYLKLTMAVEDKLLEVSISEQIEGNTGPSYLEELKQLYQKDEFAATVQAWNDLRVEAVTI
ALTKIVMPELRRELHSVLLQESKEYVLKCCRRRLYDWLKVAPYESRISDDDDEEWDTSNG
LRVLSIAYVPDRAHSAFACVVAAAGEVVDHLRLPHLLYRRNAWDALERKNKEADMTALRR
FILRKKPHVIVIGGESRDALTVKADVSECVQRLVEDEQIPRIPIEIADNHISKIYSNSIR
GRNDFREYPDTLRQAVCQGRLLQDPLMEISQLCGPDEEILCLRYHPLQDQISKEDLLEGI
ELEFVNRVNEVGVDMNEAILTGRGTELLQYVCGLGPRKAQALIKLFKQTNQKLENRTQLV
TVCHMGPKVFINCSGFIKIDTSSLGDSTEAYIEVLDGSRVHPETYEWARKMAVDALEYED
EDANPAGAVEEILEAPERLKDLDLDAFAEELERQGFGNKCITLYDIRAELNSRYKDLRVP
YRSATPEELFDILTKESPETFYLGKMVLASVIGITHRKPQREMLDQANPVRNDETGLWEC
PFCHKNDFPELSEVWNHFDAGACPGQATGVRIRLDNGLSGYIHIKNLSDRHVADPTERVR
IGQTVHCRIIKIDVERFSVDCSSKSSDLLDKNKEWRPPKDPYYDQEAEDKDIRKDKDAKQ
TKERMQYVKRVIVHPAFHNISFAEAEKLMENMAQGEVIVRPSSKGSDHLTVTWKVADGIC
QHIDVREEGKENAFSLGRSLWIQGSEFEDLDEIIARHVTPMAGHARDLISYKYYRPLGGM
RDKAEEVLKEEKAKNANKIHYVISAAKNHPGRFLLSYLPRARCTHEYVSVTPDGYKFRQR
MFDSLGGLLKWFKEHFRDPPPSGTPLQRTPALRTPHASTIYHTPHAHTPAFHTPAHTPGP
AYINTPYTPSAQTPYMTPFAATPRQPDFLTPAAPRHKPIAVPVQMQQQMQPIYTEPADWQ
KAAEDWVRHRTRDTPATPRGSEGGATPRHVRSTPRHDARSTPRHDARSTPRHDVRGTPHS
HSGRSSRAASARSTPHTNTSPRSMSLGDATPLYDEN
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttcttcgactctgaggccgaggagagtggattgtctgaagatgacgagcag
cccacagagcgtaagaaggttaagcgcaaagcacaagttcagagtgacgacgaagatgaa
gacgaagaagatgatgaggaccgtctgcgtgaggagctaaaagatttgatagatgatgct
cctatagatgaatcaggtagtgacggagaagattctgatgaaggtcctacaaagaaacgg
aaaaagagtgacgatgaacttgacgaccggttagaagatgaagattatgatctcattgaa
gagaatcttggtgttaaagttgcaaggaataaatttaaacgtcttcgacgtttggaagac
gatgacagtgacaatgagggggccgatgacccggatctagagagagaggttattgcagaa
aaactctttgtcggaggatctgatgaggaggatgagaatcgttcagaagcagcagcccac
caccagcaagcgcaagcggagtacgatgatgacaatgaggacatggaatcggacgccgat
gactttattgtggatgatgatggcagaccaatcgctgagcggaagaagaaacgtaaacca
atcttcactgatgcatccctccaagaaggtcaggacatattcggtgtggactttgactat
gatgagtttgagaagtatggtgatgaagattatgaggatgaggatgaagaagacctggac
gagtacattgaggatgaggaagatgatggtgaacgaaggagaactaaaaagggtaaacca
aagcgtcccagcaagaagtctatatttgaaatatatgaaccgagcgagttgaagagaagc
cacttcactgatctggataatgagatccgcaaactggacgttcccgagaggatgcagatc
agagaggttccgatcacagcggtggaagaaggcagcactgagctggaagatgaagccgag
tggatatacaagcaggccttcctcaaggctcccgtgtccaaggctgactcgcaggaggct
agggagaggtcacgcaggggctcgagtacgataacgaagatccgccaagcgctggacttc
atgcgcaaccagactttagaggtgccgttcatagcgttctaccgcaaagagtacgtgcag
cctgagctgaacataaacgacctttggaaggtctacaagtatgatgctaagtggtgccaa
ctgaagcaacgcaaggagaaccttctgaaactcttggagaacatgcgggagtaccagctg
gataaagtgatggagaaccctgacgctcccataccggacaccatgaggctcatcagggac
gaggacattgagagactaaagaacgtccaaacgtcagaagagcttcgcgacgtgcacaca
cacttcctgctgtactactcgcacgacctgcccgagatgcagaaggtgcagcgagttaaa
gagaagaagagagaacttgatgagaagaagaaaatagcccgagaagaagccgagaagaac
ggcgaggatcccgaggaggcggctgccgaagtagaggcacgggcttccgaggaagaggac
catccttgtgacgtcaaatatgctgtgcgatccgggccttacgagctgtgcaggaaggct
ggcattgagccgctggtgaagaagttcggtctgacgccggagcagttcgcggagaacgtg
cgcgacaactaccagcgccacgaggtcgagcagcagcccgtcgcgcctttggaggctgcc
gcgccctacgccctggccacaggctcggcagcggaggtggtgcggcgcgccgtatacatg
tgcggcgtgcagttagcacgcgagcctttattacggagcacgcttcgagatgcgctgaga
gagcgagccacgctcacagtgcggcccacggcgcgaggcatgaaggagatcgacgagaac
catccatgctttggcttaaaatacctgaagaaaaagccagtccgcgacctgacaggcgat
cagtacctcaagctgacgatggcagtggaagacaagcttctggaggtttccatcagcgag
cagatcgaggggaacaccggccccagctaccttgaggagctgaagcagctgtaccagaag
gacgagtttgcagccacggtgcaggcgtggaacgaccttcgcgtggaggcggtgaccatc
gcgctgaccaagatcgtcatgcccgagctccgcagggagctacactcggtcctgttgcag
gagtccaaggagtatgtgctcaagtgttgccgtcgccgcttgtacgactggctgaaagtg
gctccgtacgagtcgagaatatcggacgatgatgacgaagaatgggatacctcaaacgga
ttgcgcgtgctatcaatagcatacgtcccggaccgcgctcactcggccttcgcgtgtgtg
gtggcggcggccggcgaggtggtcgaccacctgcgcctgccgcacctgctgtaccgccgc
aacgcctgggacgcgctcgagcgcaagaacaaggaggccgacatgaccgcgctccggagg
ttcatcctgcgcaagaagccgcacgtgatcgtgatcggcggcgagtcccgcgacgctctg
accgtgaaggccgacgtgtcggagtgcgtgcagcggctggtggaagacgagcagatccca
cggatccccatcgagatcgcggataaccacatcagcaagatctatagtaatagcattcgc
ggccggaatgacttcagggaataccccgatacactccgtcaagccgtgtgccaaggtcgt
ctcctccaagatccgcttatggaaatctcacagctctgtggccccgacgaggaaatactt
tgcttgcggtaccacccgctccaagaccagatatccaaagaggatctattggaaggcatc
gagctggaattcgttaatagagtgaacgaagtcggtgtagacatgaatgaagccattctg
acaggccgaggcacagagttactgcaatacgtctgcggtctaggtccaagaaaagctcaa
gccttaatcaagctcttcaaacagaccaatcagaagctagaaaacagaacgcagttagtt
acggtctgccacatgggtccaaaggtgttcatcaattgctcaggttttataaagattgat
acgagcagtttaggagatagtacggaggcatacatcgaagtgttagatgggtcgcgtgtt
cacccggaaacttatgaatgggcgaggaaaatggctgtggacgctttggagtacgaagac
gaggatgccaatccagcgggggccgtagaggaaatcctcgaagcgcccgaaagactaaag
gatttagatctcgacgccttcgccgaagaattggagcggcaaggtttcggaaacaaatgt
atcacgctgtacgatatccgcgccgaattgaactctaggtataaagacctcagggttccg
tatcgctcggcgactcccgaggagttgttcgatatactgaccaaagagtctccagagacg
ttttacttaggcaagatggtattagcttcagtgatcggcatcacgcacaggaagcctcaa
agagagatgttggaccaggccaaccctgtgaggaacgacgagaccggactctgggagtgc
cccttctgtcacaagaatgacttccctgagttatctgaggtatggaaccacttcgacgcg
ggcgcgtgtccgggccaagcgaccggcgtccggatccggctggacaacgggctgtccggg
tacatccacatcaagaacctgtccgaccggcacgtggcggaccccacggagcgcgtccgg
atcggacagacggtgcactgccggatcatcaagatcgatgtggagaggttctcggtggac
tgctcgtcaaagtcttcggacttgttggataaaaataaagagtggagaccgcccaaagac
ccgtactacgaccaagaggcagaggacaaagacatccgcaaagacaaggatgcaaagcag
actaaagaacggatgcagtacgtcaagcgggtgatcgtgcatcctgctttccacaacata
tccttcgccgaggcagagaaactcatggagaatatggcacaaggagaggtcattgtcagg
ccgagcagtaagggctccgatcacttgacagtaacgtggaaggtggctgacggcatctgc
caacacatcgacgtccgcgaggagggcaaagaaaacgcgttttcattaggccgaagtctc
tggatacagggatccgagttcgaggatctcgacgaaatcatcgcgcgccacgtgacgccg
atggcgggtcacgcgcgcgatctcatctcctacaagtactaccggccgctcggaggcatg
cgcgacaaggccgaggaagtgctcaaagaagaaaaggcaaaaaacgccaacaagattcat
tacgtcatatccgcggctaagaatcaccccggccggtttttgctatcgtatctcccgcgg
gcgaggtgtactcacgagtatgtgtccgtcacgcccgatggctacaagttcaggcagcgg
atgtttgattcccttggcgggttgctcaagtggttcaaagagcacttcagagatccgcca
ccgagtgggacgcctctacagcgtacgccggcgttacgtactccgcacgcgtcgacgata
tatcacacgccgcatgctcatacgccggccttccatacgccggctcacacgccgggcccg
gcgtatatcaatacgccttatacgccgtcggcgcaaacgccgtacatgacgccgttcgcc
gccacgccgcgacagcctgacttcctcacgcctgcagcgccgcgtcataagcccattgcc
gtgcccgtgcagatgcagcagcaaatgcagcctatttacacagaaccagccgactggcag
aaggcggccgaagactgggtgcggcaccgcacgcgcgacacgcccgccacgccgcgtggc
agcgagggcggcgccacgccccgccacgtccgctccacgccgcgacacgacgcgcgctcc
acgccacgacacgacgcgcgctcgactccacgacacgacgtccgaggcacgccgcactcg
cactcgggccgctcgtcgcgcgcggcgtcggcgcgctccacgccacacaccaatacctcg
ccgcgctccatgtcgctgggcgacgcgacgccgctctacgacgagaactag
DBGET
integrated database retrieval system
