Ostrinia furnacalis (Asian corn borer): 114350935
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Entry
114350935 CDS
T07986
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03030
DNA replication
ofu03410
Base excision repair
ofu03420
Nucleotide excision repair
ofu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114350935
03410 Base excision repair
114350935
03420 Nucleotide excision repair
114350935
03430 Mismatch repair
114350935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ofu03032
]
114350935
03400 DNA repair and recombination proteins [BR:
ofu03400
]
114350935
DNA replication proteins [BR:
ofu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114350935
DNA repair and recombination proteins [BR:
ofu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114350935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
PTCB-BRCT
AAA_22
AAA_30
AAA_14
AAA_5
AAA_33
AAA_16
AAA_17
RuvB_N
BRCT_2
AAA_assoc_2
RNA_helicase
AAA_6
AAA_19
AAA_18
AAA_11
Motif
Other DBs
NCBI-GeneID:
114350935
NCBI-ProteinID:
XP_028157701
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MSRDIRSFFQPKKAPKAKVEELDDDVIPESPEVQIKNKKKESRKKRVLSDSEEEIFDSKK
KKPINDPKKKSPSKTKTKSPKKPVLKEVKAVDIFGSAPIKRTEPIVKKSEKKEKKNTETG
IHSDDDFDKSLLELDEIEESALKLEEPTTSKAPDEHEKSDQKIEQSPLKIKEKQLDKTEI
KKEKSPFKIKDKQPEKNDIKKEKSPFKINDNDIQDKNGSKKFKNEPKSNISKMNDKKRKF
AEFLENENETNHDSGKSNVDAAVKKKKLNDSVTDDKRNGSKEVKVKKEDSNDLHDNDATI
IEDEINESRHESTKKKKFNKSLNESVLTDEERHERKIHSAQLYQKYLNRSGPKHLGAKEI
PEGAPDCLKNCAFLLTGVLDSFEREEVTDAITKYGGCIKSGISKKVTHVLAGEEAGPAKM
AKAQELGIKIINEDEFIQMIRDSTNKHSKEKDTKKEKSPSRKSSKDKKESKEINGVNKNM
NDTNKTKTSHRKDEDKSKHEKTNGSESKENKSKIPKKVETEIKKENEVKKEKKIELDKPK
TTDLASAGKSDSSKSVTSSIDMMWVDKYKPQNLKQIIGQHGDASNVKKLTNWLTKWYVNR
KAKLPKPSPWAKNDDGGYFKAALLSGPPGVGKTTTVALVCKELGFDVVEFNASDTRSKTL
IKEQITELLNTTSLSGYSKGDTGKQAVTKKHVLVMDEVDGMAGNEDRGGLQELIGLIKAT
SVPIICMCNDRNSQKMRSLVNYCYDLRFTRPRVDQIKSAMMSICFKEGLKIPPDALSQLI
VAANQDVRQTLHLLSMWAADPDADPDKLRKDATSVRKDVKLGPWEAIRKVFSAEDHKTMS
INDKSDLFFYDYSLAPLFVYENYLQVAPHCPKNEILDRVSRAADSISLGDLVDARIRRSQ
AWGLLPMQAMYSSVIPGHWLSGHVAGQIQFPGWLGKNSRANKMQRLCQEIHAHTRLSTSG
SKSSIFLDYSSHLRDAIVTPLIKDRSEGIGEALGVLEAYHLLRDDLDSLTELSLWPGQRN
PMVLVDSKVKAAMTRTYNKSATALPYAPGTIKKGRGRDDNDNEDEVDDDAAQDEEEDSDP
ENDALIKKKKAKEDKPASKDKPSSSKEKPSTSKSKASSSKEKKKK
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggatataagatcatttttccaaccaaaaaaggctccaaaagcaaaggtagaa
gagcttgatgatgatgttattccagaatctcctgaggttcaaattaaaaataagaaaaaa
gaatcacgtaaaaagagagtcctgagtgattctgaagaagaaatatttgattcaaagaag
aagaaaccaattaacgaccctaaaaagaaaagtccgtctaaaactaaaacaaaaagtcca
aagaaacccgttttaaaagaagtcaaagctgtggacatctttggtagtgcacccattaaa
agaacagaaccaattgtcaagaaatctgaaaagaaagagaagaagaatacagaaacaggt
atacattcggatgacgactttgataagagtcttctggaactagatgaaattgaagagtca
gcgttaaaactagaagaaccaacaacgagcaaagcacctgatgaacacgaaaaaagtgat
caaaagattgaacaatctccacttaaaattaaggaaaaacaacttgataaaactgaaatc
aaaaaagaaaaatctccattcaaaattaaagataaacaacctgagaaaaatgatatcaaa
aaggaaaaatcgccatttaaaattaatgacaacgatatccaagataaaaatggatctaaa
aaatttaaaaatgaaccaaaatctaatatatcaaaaatgaatgacaagaaaagaaagttt
gcagaattccttgaaaatgaaaatgaaactaatcatgattctggaaaatctaatgtagat
gcagcagtcaagaaaaagaaactgaatgatagcgtcacagatgataagagaaatggcagc
aaggaggttaaagtgaaaaaagaagacagtaatgatttacatgataatgatgccactatc
attgaagatgaaattaatgaaagcagacatgaaagcactaagaagaaaaagtttaataaa
tcacttaatgaatcagtgctaactgatgaagaaaggcatgaaagaaaaattcactctgca
caattataccaaaagtatttgaacagatcggggcccaagcatttgggagccaaggaaatc
ccagagggcgctccagactgtttgaaaaattgcgcgtttttgttaaccggagttctcgac
tcctttgaaagggaagaagttacagacgctattaccaaatatggtggatgcatcaaaagc
ggtatcagcaagaaggtaactcatgtgttagctggcgaagaggcaggtcccgcgaaaatg
gcaaaagcacaagaattaggaatcaaaataatcaacgaagatgaatttatacaaatgatc
agggactcaacaaacaagcactcaaaagaaaaagacacaaaaaaggaaaagagcccaagt
agaaaatcaagtaaagataaaaaagaatcaaaagaaatcaatggtgttaacaagaacatg
aatgacacaaataaaacgaaaacatcacatcgaaaagatgaagacaagtcgaaacatgaa
aaaacaaatggttcggaaagcaaagaaaataaatctaaaattccgaagaaagttgaaaca
gaaattaaaaaagaaaatgaagttaaaaaagagaagaaaatagaattagataaacctaaa
acaactgatttagcaagtgctggaaaatcagattcttctaagagtgttacaagttctatc
gacatgatgtgggtagacaaatacaagccacagaacttgaagcaaatcatcggacaacac
ggagatgcgagcaacgtcaagaagttaacaaattggctgacgaagtggtatgtgaatcgc
aaggccaagctgcctaagcccagcccgtgggccaaaaacgacgacggagggtacttcaaa
gcagcactgctgtcgggacctcctggtgttggcaaaactacgacggtggcgctagtttgc
aaggagctgggattcgacgtggtagagttcaacgcctcagatacaagaagcaagactctt
atcaaggaacagatcactgagctcttgaataccacctcactgtcaggatacagtaaaggt
gatacaggcaagcaggctgtcacgaaaaagcatgtcttggtaatggacgaagttgatggc
atggcggggaatgaggacagaggaggcctccaagagctgataggcttgataaaggcgacg
tcagtgcccataatatgtatgtgcaacgaccgcaacagtcagaagatgcgctctctggtc
aactactgctacgacctgcgcttcaccaggcctcgggtcgaccagataaagtcagcaatg
atgtcgatctgcttcaaagaaggcctcaagattcctccggacgcgctatctcaactcata
gtagccgccaaccaggacgtccggcagacgctgcacctgctgtccatgtgggcggccgac
ccggacgccgacccggacaagctcaggaaggatgcaactagcgtccggaaagatgtcaag
ctgggcccgtgggaggcgatccgcaaggtgttctcggcggaagaccacaagacgatgagc
atcaacgacaaaagcgacctattcttctacgactacagccttgcgccgctgtttgtctac
gagaactatctgcaggtcgcgccgcattgtccgaagaatgagatattagaccgtgtaagt
agagcggcggacagcatcagtctaggcgacctggtggacgccaggatacggcgcagtcag
gcctggggactcctgcctatgcaagcaatgtacagctcagtgatacctggtcactggctg
tcgggccacgtggccggccagatacagttcccgggctggctgggcaagaactcgcgcgct
aacaagatgcagcgcctctgccaggagatacacgcgcacaccaggctcagcacttcaggt
tcgaagtcgtcaatcttcctggactacagctcgcacttacgcgacgcgatcgtgaccccg
ctcatcaaggaccgctcggagggcatcggcgaagccctgggcgttctggaggcctaccac
ctgctcagggacgacctggactccttgacggaactgtcactgtggcccggacagaggaac
cctatggtgttggttgattctaaggtaaaagcagcgatgacgcgaacctacaacaagtca
gccacggcgctaccttatgcgccgggcaccatcaaaaagggccgcgggcgagacgataac
gacaacgaagacgaagtggacgacgacgccgcgcaggacgaagaagaggacagcgatccg
gagaatgatgcgcttatcaagaaaaagaaggcaaaagaggataaacctgcaagtaaagat
aaaccaagttcaagtaaagaaaaaccaagtactagcaaatctaaagcgagttcaagtaaa
gagaagaaaaagaaataa
DBGET
integrated database retrieval system
