Ostrinia furnacalis (Asian corn borer): 114352549
Help
Entry
114352549 CDS
T07986
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114352549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ofu03019
]
114352549
03012 Translation factors [BR:
ofu03012
]
114352549
Enzymes [BR:
ofu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114352549
Messenger RNA biogenesis [BR:
ofu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114352549
Translation factors [BR:
ofu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114352549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_N
HA2_C
OB_NTP_bind
ResIII
AAA_19
nSTAND3
Cas3-like_C_2
AAA_22
AAA_11
SRP_TPR_like
ABC_tran
nSTAND1
Rad17
RsgA_GTPase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
114352549
NCBI-ProteinID:
XP_028159974
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MSDRGDRGKRYRKDKGWGSSKFIQPVARHPHRLKGKDIGLFYKRQQARRNKNTPLTINLS
IPSSVIAKLISNIQLITKLAAQQKIDIFPEKISHLFSQKASLSNISSDKKDSEVPKSSQA
IAAPEAHTSQRSDVDSKTSVKTKINTNYYFDSDSTPSTSVDDIPFALDEASDTDRKDFDE
RVLSLRAPADFKYGYKDIITGTFKEKLNECLARGINITRQDEDIATLNLVLYEEHLNALS
KSHYKKLLTFREKLPAYKKTQRVLEMVKNNQVIVISGETGCGKSTQVPQMILDDAIMKKR
GGNVKILVTQPRRIAASSLASRVAQERAEALGVSVGYAVRLEKVDCRPRGSIMFCTTGVL
LVDLEVNQALSDYSHIILDEVHERDTHVDFAMCMLKQVLQKRKDLKLILMSATLDAEKLC
NYFNFCPMLHIEGLAYPVKDVYMEEILHLTNYQLGEEVMPQRPKNYRGRKFDRSIHEQME
KSIQYKAEIAPWLESVKKFMDSKIYRTLQNPKIEELNYDLMLELIKYICRGPPGAILVFL
PGIGEITKLMSMLYDNERYLGSKCEIHPVHSKLPSLDQRRIFERPPHNVRKIVIATNIAE
TSITIDDIVYVIDCGKIKYSGLNVEHYFSTLKVEWASQANMRQRRGRAGRCQPGVCYHLV
TTFRAAKLPERLLPEMQRNNLLEPVLMIKQLRLGNAAEALKQFPDPPEEETVKRAVKHLQ
QCGALDDEEKLTPLGWHLARLPVHPAAGKLLVLGALFGCLDRAASVAAVWSFKDPFLLIL
DKDNEIKEVKRQLAMGEPSDHMALSEAIIQWEQCDPGERKAFAYANFLSNSTLELLSEMK
KQLGGNLQQMGFLNTGRVTSTFENRNYENLSLFKAIVAASLYPNITSVRWINLHARNPNK
QIRVCPKSPDGPMTIHPSSLMSPPKRLPHRPLPPRTPPCLNPGANWLVYWLKQKSSDMFL
IDVTLVYSLPLLFFGELNISETEQNEPNYCYVWITCYRVKMLKETAKLLFQLRSLLDQVL
ASKIMVRSKHSTHNSDFEEKVLNAVIEVITAEDERAEYLDGGTESDTSESDSRY
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcgcggtgatcgtggtaaaaggtataggaaggataaaggttggggtagttca
aaattcatacaacccgtagccagacatccacatcgattgaaagggaaagatattggcctt
ttttacaagagacaacaagctaggcgaaataaaaatacacctctaacgataaatttatcc
atcccaagttctgtaattgctaagttaataagcaatatacaacttatcactaagttagca
gctcaacaaaaaattgatatattccctgaaaagatatctcatttgttcagtcaaaaagct
tctttatcaaacatttcgtcagataaaaaagactctgaagtgccaaaatctagtcaagca
atcgctgcacctgaagctcatacaagtcaaagaagcgatgttgattccaaaacgtcggta
aaaacaaaaattaacacaaattattattttgatagtgattctacaccaagtacttcagtt
gatgatataccatttgcacttgatgaagctagcgatacagacagaaaagattttgacgaa
agagtgttgagtctaagagcaccagcagattttaaatatggatacaaagacataattact
ggaacgtttaaggaaaaactcaatgaatgtctggccagaggcataaacatcactagacaa
gatgaagatattgcaactttaaatctcgttctgtatgaagaacatctaaacgctttatca
aaatcacactacaaaaaactgttgactttccgtgaaaaattgccagcttataagaaaact
cagcgtgttttagaaatggttaaaaataaccaggtgattgtcataagtggagaaactgga
tgtgggaaatcaacacaggtaccacaaatgattttagatgatgctattatgaagaaaagg
ggcggcaatgtaaagattctagtcactcagccaagaaggattgctgcgtcgtcattagct
agtcgagtggcccaagaacgtgctgaagctcttggggtttccgtaggatatgctgtgcga
ttggaaaaggttgactgcagaccacgtgggagcataatgttttgcaccaccggtgttctt
ctggtggacttggaggtcaaccaagcgctgtcggactacagccacatcatactagacgaa
gtgcatgagagagacacccatgttgatttcgctatgtgtatgctaaaacaggtgttgcaa
aaacgtaaagatttgaagttgattctgatgagtgctacactagacgccgagaaattgtgc
aattactttaacttctgcccaatgctgcacatcgagggcttggcatatccagtcaaggat
gtttacatggaggagattctgcatctcacgaactatcagctgggcgaagaagttatgccg
cagagacctaagaactaccgcggcagaaagtttgacagatctatacacgaacaaatggaa
aaatctatacagtacaaagctgaaattgcaccatggttggaatccgtaaagaaattcatg
gattccaaaatctaccgcactttacaaaatccaaaaatagaagaactcaattatgatctg
atgcttgaactaataaaatacatttgtagaggccctccaggtgctatattggtgtttttg
cctggtattggggaaataacgaaacttatgtcaatgttatatgacaatgaaaggtatttg
ggatcaaaatgcgagatacaccctgttcactcaaaactgccatcgcttgaccagcgcaga
atattcgaaagacctcctcacaatgtgagaaagattgtgattgcaacgaatatcgctgag
acttcaatcactatagatgacattgtgtacgtcattgactgcgggaaaattaaatacagc
ggtctaaacgtcgagcattacttctctactttgaaggttgaatgggcttctcaagcgaat
atgcgtcaaagacgcggtcgcgccggccgttgccaaccaggcgtctgctaccacctagtg
acaaccttccgtgctgcgaagcttcccgagcgcctcctaccagagatgcaaaggaacaac
ttgctggaaccggtgctgatgattaagcagcttcgacttgggaatgcagcagaagccttg
aagcagttccctgatccacctgaagaggagactgtgaagagagctgtgaagcatttgcag
caatgtggagcgctggatgacgaagagaagctgaccccgctgggatggcacttggcgcgc
ttaccagtacatcctgcagcggggaaactactggtcctgggcgccctgtttggatgcctc
gaccgtgcggcgagtgtggcagctgtgtggagcttcaaagacccgttcttgcttatactt
gacaaagataacgaaataaaagaagtaaagcgccagctagcaatgggtgaacctagcgat
catatggccctatccgaagccataatacaatgggagcaatgtgacccaggagagcgcaaa
gcattcgcctatgcaaacttcctatcaaacagcacgttagaactgctgtcagaaatgaag
aaacagctgggaggaaacttgcagcaaatgggattcttgaatacgggaagagtgacatcc
acatttgaaaacaggaactatgagaatttgagccttttcaaggctattgtcgcagcatcg
ctgtaccccaatattacctctgtcagatggataaatttacacgctcgtaatccaaacaag
caaatacgagtgtgccctaaatctcccgatgggccgatgaccattcatcccagcagtctc
atgagtccgcctaaaagactgcctcacaggcctctgccgccgaggactccgccatgtctt
aaccctggcgccaactggctggtgtactggctgaagcagaagtcttcggacatgtttctg
atcgatgtcactcttgtgtactcgctgcctttgctgttcttcggggagctgaatatttcg
gaaaccgagcaaaacgaaccaaactattgctacgtatggataacgtgttacagagtcaaa
atgttgaaagagactgcaaagcttctctttcaactaaggtcgctactggaccaagtccta
gcatccaagattatggtccgaagtaagcactctacacataactccgattttgaggagaaa
gtactgaacgccgtaatagaggttataacggcggaagacgagcgagctgaatacctagac
ggaggcactgaatcagatacctccgaaagtgattccagatactaa
DBGET
integrated database retrieval system
