Ostrinia furnacalis (Asian corn borer): 114352652
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Entry
114352652 CDS
T07986
Name
(RefSeq) endoribonuclease Dcr-1-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ofu03036
]
114352652
Chromosome and associated proteins [BR:
ofu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
114352652
microRNA pathway
RISC loading complex
114352652
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Ribonucleas_3_3
PAZ
Motif
Other DBs
NCBI-GeneID:
114352652
NCBI-ProteinID:
XP_028160127
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
TREDGTTKIDIDWPFLELIYQHTEDTKYSELEPPLHWPNGEEETSVPKVNKEEEKGSKKE
ISNPLLKPGETFVFDPEKYREAVVTPWYRNQDQPQFFLVAEICWNLTPDSAFPSATHTSF
RNYYSNKYGVVLTQPNQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRDRLD
QKQILVPELCRVHPFAAPLWFATVALPCVLYRINALLIADEIRRAVAIDVGLGIPKIDDS
TCPGFQWPALDFGWSLAEVLSADSEKTEKKKDEEDKKEEKDVEVKEEEEVIEEIPRTEEP
PEKTINDILAEKEDAESGFEIGTWSNDMASSIPDSIEYDEYMEPLPSNLTFCTSASGGTN
WCDPIEKPKREFHPTRTFSMAESDCSYMSSDFDTDDSDLNTDSDDDTENGGFWSKNSMGV
RIEYKTAHEAEAVDVEKKKKTRPQPQRDVIDDARDRDAYKKYMAEGNGPSEYLEKFRSSV
THHKQDLITNGNLIKKDQAIAEILPETKEHKPQTLNAPPSKILDDLFPYGQEELTIDSEG
QISLESIEKNKRVLLKSLKDTMSEEEVKKLQCFSMVDVDIDSPNYVNEKVANVGFDTIDS
YVEKMSKKDEAKEFKPYYQDGRGYGKEFDFDYQPDLEGHPGPSPSVILQALTMSNANDGI
NLERLETIGDSFLKFAITAYLYCAHPAVHEGKLSHMRSKQVSNLNLYRLGRNKRLGARMI
ASKFEPHDNWLPPCHKAPLTHTQPDAKLEHLTEDAPVDSSGCFIPYNLITQHSIPDKSIA
DCVEALIGAYLLECGPRGALLFMSWLGIRVLPRHLVTLPEDHPYVKAAEVENCTKQSAPS
SPKHSRSDSDSESECSSDEDEQQEIELDWSALIPGTLKPQRAATGEWMQPVFGELKAPPS
PLLRYIEDPEGELEQMLSGYDALERTLQYRFKDRSLLLQALTHASHQKNRLTDCYQRLEF
LGDAILDYLITRHLYEDPRRHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLN
EVLTKYVKIQEENGHSISEEHYLIQEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSL
GAVWKSYVNLMGAELEAFSAAAPKSPVRELLEAEPDTAKFGKPERLADGRRVRVCVEVFG
RGAFKGVGRNYRIAKGTAARCALRHLKAHAAR
NT seq
3521 nt
NT seq
+upstream
nt +downstream
nt
caacgagagaagacggcaccaccaagatagacatcgactggccgttcctagaactgatat
accaacacacagaagacaccaagtattcagaattggaacctcctctacactggcccaatg
gggaagaagaaacgagcgtgcctaaggtgaacaaagaggaagagaaaggcagcaagaagg
aaatcagcaaccctctcctaaagccaggagagacgtttgtgttcgaccccgagaagtata
gggaggcggtcgtcactccctggtataggaatcaggaccaaccgcagttctttctagtag
cagagatatgttggaacctcacaccagactcggcgttcccttcagccactcataccagct
tcagaaactactatagcaataaatatggggtggttttgacccagcctaaccaaccactgt
tggatgtggaccatacgagcgcgagattgaaccttctgacgcctagatacgtaaaccgca
aaggcgtggccttaccagtgtcatcggaacgcacgcgccgagcgaaacgagaccgactgg
accagaagcagatattagttcccgagctctgccgcgtgcatccctttgcggcgccactgt
ggttcgctactgtggcgctaccttgcgtgctttacaggatcaacgcgcttctcatagccg
acgagatccgtcgagcggtggccatagacgtgggtcttggtataccgaagatagacgact
ccacgtgtcctggcttccaatggccagcgctggacttcggatggagtttggctgaggtac
taagtgcggactctgaaaagactgaaaagaagaaagacgaagaagataaaaaggaggaaa
aagatgttgaagtcaaagaagaagaagaagtgatagaagaaattccaagaacagaagaac
caccggagaaaaccatcaacgatattctagcggagaaagaggatgctgaaagtggcttcg
aaatcggcacgtggagtaacgatatggcgtcttcaataccggattcgattgagtacgacg
agtatatggagccgctaccttccaacctcaccttctgcacttctgcttcaggtggtacca
actggtgcgaccccatagagaaaccgaagagagagttccatccgaccagaacgttctcta
tggcagagagcgactgctcttacatgtcgagtgatttcgacacagacgactctgatttga
acaccgatagcgacgatgacactgaaaatggtggattttggagtaagaactcgatgggag
tacgaatagagtacaaaacagcgcacgaagccgaagctgtggacgttgaaaagaaaaaga
agacgcgcccacaaccgcagcgtgacgtcatcgatgacgcgcgcgaccgtgatgcctaca
agaagtatatggccgaagggaacggccctagcgagtacctcgaaaagttccgttcatctg
tcacccaccacaagcaagatctaatcaccaacgggaacctcatcaaaaaggatcaagcaa
tcgccgaaatcctaccagagacaaaagagcacaaaccacagactctaaatgcacctccgt
ccaaaatactggacgatttattcccatacggccaagaagagttgaccatagactctgagg
gccaaatcagtttggaaagcatagagaaaaacaaaagagtgttactaaaaagtttgaaag
atacgatgagcgaggaagaagtgaaaaagctacagtgtttctctatggtcgacgtagata
tcgactcgccgaattacgttaacgaaaaagtcgcaaacgtaggttttgataccatagaca
gttatgtggagaaaatgagcaaaaaggatgaagcgaaggagtttaagccgtattaccagg
acggtagaggctacgggaaggagttcgattttgactatcagcccgatttggagggacacc
ctgggcccagtcctagcgttattttgcaggcactaacgatgtccaacgccaacgacggca
tcaacttagagcgtttagagacgatcggcgacagttttctaaagtttgctatcaccgcgt
atttgtactgcgctcacccggctgtgcatgaaggaaaactaagtcatatgaggagtaaac
aggtttccaacttgaacctctaccggctaggcaggaacaagcgtctcggtgctaggatga
tagcgagcaagtttgagccccacgacaactggttgccgccgtgccataaggcgcctctca
cacatacacaacctgacgctaagctggagcatctaactgaggatgcgcctgtggacagct
cgggctgtttcatcccatacaacctgatcacgcagcacagtataccggataaatcaatag
ccgactgcgtagaagcgctaataggggcgtacctcctggagtgcggccctcgcggcgccc
tcctgttcatgtcgtggctcggcatccgagtgctcccgcgacatctggtcacgctgcccg
aagaccacccttatgtcaaggccgctgaggtcgaaaattgcactaagcagtcagccccct
cctcgcccaagcactcccgatccgattccgattcggagtcggaatgcagttccgacgagg
acgagcagcaggagatagagctagactggagcgcgctcataccggggaccttaaaaccac
aaagggcggctactggagaatggatgcagcccgtgtttggagaactgaaggcgcccccgt
ctcctctcctaagatacattgaagatccagaaggggaattggaacaaatgctatctggtt
acgatgccctagagaggacgctacaatatcggttcaaagaccgctctctactacttcaag
ctttgactcacgcctcgcaccaaaagaaccggctcaccgactgctatcaacggctggagt
tccttggagacgccatcttggactacctgatcacgcggcacttgtacgaggacccgcggc
ggcactcgcccggcgcgctgacggatctacgctcagcgctcgtcaacaacaccatcttcg
cgaccctggccgcgcgacacggcttccacaaatacttccgccacatgtcgcccggtttga
acgaggtgctcacgaaatacgtgaagatacaggaggagaatggacattccatcagcgagg
agcactacctgatacaagaggacgaaatggagcaagcggaagacgtggaagtccccaaag
cattaggagacttgttcgagtctgtagccggcgctatattcctggactcaggcatgtctc
tgggtgcggtatggaagtcatatgtgaatcttatgggagcagaattggaagccttcagtg
ccgccgcacctaaatcaccagtcagggagcttttggaagcagagccggacactgctaagt
ttggcaaaccagagcgtttagcagacggccgccgcgtccgagtttgtgttgaagtatttg
gacgtggcgccttcaaaggagtcggaagaaactatcgcattgctaaagggaccgccgcta
ggtgtgcccttaggcaccttaaggcacatgctgccaggtag
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