Ostrinia furnacalis (Asian corn borer): 114353132
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Entry
114353132 CDS
T07986
Name
(RefSeq) zinc finger protein swm isoform X1
KO
K13192
RNA-binding protein 26
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ofu01009
]
114353132
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ofu03019
]
114353132
03041 Spliceosome [BR:
ofu03041
]
114353132
Protein phosphatases and associated proteins [BR:
ofu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114353132
Messenger RNA biogenesis [BR:
ofu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
114353132
Spliceosome [BR:
ofu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114353132
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_Nup35
PWI
zf-CCCH
zf_CCCH_4
RRM_1
Motif
Other DBs
NCBI-GeneID:
114353132
NCBI-ProteinID:
XP_028160769
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MIIENPDAFKSWLTSILEPLCDADPAALAKYVYALVKKDKPLEELRDGMVDQLDVFLQHE
TKPFVDMLFKSLETHEYLLPTEKRPSPPPAPAPEPAAEPEHNTAEVPLPPAVTTNGAESP
LAAAPAPAAEPRPPRHRVVVSRTAAKPAPAPAVPRAPPTEQTLVKVLPLTELLEEPVDHA
PRRRDRRADSLRDKEERRRRRSRSWERRARARRHPRDIHNDDRRRPVSRSPSPRGRYRNR
SPPPSILDRVGSRSRSRSPVPVRERDHERERERLRVPRELERDRISRDREHRDRLSRSRD
RDRSRDRSRDRSVSPRDARDRLDHNDLYKRRCKDFDEKGYCMRGDLCQWDHGADPLVLED
AALTRVLTVPPSVPEYNPLTPDIWMGGGFAPYPHHPPHPPHPPRELIPIPSFAPRLRHEA
PPRHPPPHKKQFDYNRLGAPRPPLPANAANCSLEVKKVPRGLNEITHLNNHFCKFGKIVN
IQVCFEGDPEAALITFSTPTEANVAFKSTEAVLNNRFIKVFWHKPENKQENTAPVGQQAA
KPAERQNNQHPMSHNKVLINRDNIKATADIKQANAEKQAKEATNGTTEPKKEVVMKPVDK
SKQVMEMMKRAQALLEKQLQQQLLLIEKLESGNISDSQKAALMEAINSAQEGIEKLRNEL
FAYNGTLRQMQADTVARSMSRLQLQANAKKPKTRQEAEKEILDAELDMFTKQQEGQDVTE
LAKKVADLRRQMAIQFPPHPGMRRPHSRGGRFNTASRFVRGAGKAFSANQSVDHRPRALL
ISGFEADEQSAVIQHFMQYGEVVSKEVNLAVPELVIQYKARAHAELAAAAGKHYNDRTLS
ITWVANTKAYLGGMAETRPAVNGEASEENKEPETSQEITEDTLLRFDEEEEDDAEEDRSW
RR
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgattattgaaaatccagacgctttcaaaagctggttgacgtccatattggaacctcta
tgcgatgctgacccggccgcgctcgccaaatacgtgtacgctctggtcaagaaggacaag
cctctcgaggagcttcgagatggcatggtcgaccagcttgacgtgtttctgcaacatgaa
accaaaccgttcgtggacatgctgttcaaatctctggagacgcacgagtacctcttgccg
accgagaagcggccgtcgccgccgcccgcgccagcgcccgagccagctgcggagcccgag
cacaacacggccgaggtgcctctaccgccggccgtgacgaccaacggggcggagtcccct
ctcgccgccgcgcccgcgccggccgcggagccccggcctccgagacaccgcgtggtggtc
tcgcggaccgcggcgaagcccgccccagcgccggcggtgcctagggcgccgcccacggaa
cagactcttgtcaaggttttgcccctgacagaattactggaagaaccagtggaccacgcg
ccaaggagacgagaccggagggccgactcgttgcgcgacaaagaggagcgtcgccgtcgc
cggtcgcgctcgtgggagcgccgcgcgcgcgccagaagacatccccgggacattcacaat
gacgacagaagacggccggtgtcccgatcaccttctccgcgaggtcgctaccgaaaccga
agcccgccgccttcgattctcgacagggtcggcagccggtccagatcaaggtcaccagta
ccagtgcgggaaagagaccacgagagagagcgggaaagactgcgcgtcccacgcgagttg
gagcgggacaggatatcgcgcgacagggagcatagggacaggctgtcccgctctagagac
agggacaggtcacgggacagatcgcgcgaccgctccgtgtccccgcgggacgcgcgggac
agactggaccacaatgacctgtacaaacgacgatgcaaagattttgacgaaaagggttac
tgcatgcgaggcgatctgtgtcagtgggaccacggcgccgaccctctagtattagaagac
gcggccctcacgcgagtgctcactgtaccgccttctgtgcctgaatacaacccgctgacg
ccggacatctggatgggcggcggcttcgcgccctacccgcaccacccgccgcacccgccg
cacccgccccgcgagctcatacccatacccagtttcgcgcctaggctgcgtcacgaggcg
ccgccgcgacacccgcctcctcacaagaagcagttcgactacaaccggctgggagcgccc
cgaccgcccttacccgcgaacgcagccaactgttcccttgaagtgaagaaggtgccgcgg
ggtctcaacgagataacgcatcttaacaaccacttctgcaagtttggcaagatcgttaac
atacaggtgtgcttcgaaggtgaccctgaggcggctctcattacgttctccactcctaca
gaagccaacgtcgctttcaagagtaccgaggcggttctcaacaaccgattcatcaaggtc
ttctggcataagcctgagaataagcaagaaaacacagcaccagtgggtcaacaggcagcc
aagcctgcggaacgtcagaacaatcagcacccgatgtcgcacaacaaggtgttgatcaac
cgcgacaacattaaagcgacggctgacatcaaacaggcgaatgctgagaagcaagcaaaa
gaagccaccaacggcacaacagaaccgaagaaagaggtggtgatgaagccagttgacaag
agcaaacaggtgatggagatgatgaagcgcgcccaggcgctgcttgagaagcaattgcag
caacagctgttgttgatcgagaaactcgagtcgggcaacatcagcgattcccagaaggct
gcactaatggaggcgatcaactccgcccaagagggcatcgagaagctcagaaacgaactg
tttgcgtacaacggaaccctcagacagatgcaggcggatacagtcgcccggtcgatgtcg
cgtctacagctacaggcaaacgccaagaaacctaagacaaggcaggaagcggagaaagag
attttggacgccgaattggacatgtttactaagcaacaggaggggcaagatgtgacagag
ctggccaagaaagttgcggacttgaggcggcagatggcgatacagtttcccccgcatcct
gggatgaggagaccacattccaggggcgggcgattcaacactgcttcccgtttcgtgcgc
ggcgcaggcaaggctttcagcgctaaccaatctgtggaccacagaccaagagcgctgctg
atatccggatttgaagcagacgagcagagcgcagttatacagcactttatgcaatacggc
gaggtagtcagcaaagaagtgaatctagcggttcccgagctggtcatacagtataaagcg
agagcacacgccgagctcgcagccgccgctggcaaacattacaacgaccggacgctgtcg
ataacgtgggtggccaacacgaaggcgtatcttggcggcatggcggagaccagacctgcg
gttaacggagaggccagcgaggagaataaggagcccgagacatctcaagaaataaccgag
gacacgttactgcggttcgacgaggaggaagaggacgatgcggaagaagatagatcctgg
agacgttga
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