Ostrinia furnacalis (Asian corn borer): 114353298
Help
Entry
114353298 CDS
T07986
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114353298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ofu03041
]
114353298
Spliceosome [BR:
ofu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114353298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
PRP4
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
114353298
NCBI-ProteinID:
XP_028161039
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MSDDEDVILVKKSKQVHYGSLEEQEKARLAALAAAAREGTEDNGGKELGDIQISNEYMEL
EEEMSRDKKALLEEFERRRKARQLNVSTDDDEVRRSLRQLGEPVCLFGEGPAERRVRLRD
LLSYLGEDAIHKKMEEEEARIERDRGREGTWYHEGPPELRDARLWIARYSLPRAKQRLTK
AREDLQLAGSVRAAAKQDSQRKASAISIYCSQIGDTRPISFCRFSSDSQMLITSSWSGLS
KVWSVPDCTPLQVLKGHSCNVSSAVFHPQAALPNHFRDKIKNTKEGTSDTPEAMETDEKS
AACTMASCAYDGTVYLWNFSSEAPMASLDGHGPSRVSRAEFHPSGRFLATTVFDHSWRLW
DLETATEVLHQEGHAKPVYSVAFQIDGSLAVTGCKVPTQPRSFLADVIVRQVGEALVQPS
LASAQDLIRT
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgatgaggatgtgattctggtgaagaaaagcaagcaagtccactatggatcc
ttggaggaacaggagaaggctcggctggcggcactggcggctgcagccagagaaggaacc
gaggataatggcggaaaagagcttggagacatacaaatttcaaatgaatatatggagctt
gaagaagagatgtctcgtgataaaaaagcactgctcgaagaattcgagcggagacgcaaa
gctcggcagctgaatgtgtccaccgacgacgatgaggtacgaagaagtcttcgtcagctc
ggtgagccggtgtgcctcttcggtgagggtccggcagagaggagagttcgtttgagggac
ttgcttagttacctgggagaagatgcaatccacaagaaaatggaagaggaggaggcccgt
atagaaagagacagaggccgcgagggcacgtggtaccacgaaggacctccggagttgagg
gacgctaggctttggatcgctcggtactcactgccgagggcgaaacagaggcttacgaaa
gcccgtgaggacctgcaactggcaggcagcgtaagggcagcagcgaaacaagactcgcag
agaaaggcctccgccatctccatatattgcagccagattggcgacactcggccaatcagc
ttttgcagattcagcagcgacagtcaaatgcttataacttcaagttggtccggactcagc
aaggtgtggtcagtaccggactgcacgccgctgcaagtgctgaaaggtcactcttgcaac
gtcagcagcgctgtgttccatccacaggccgcgctgcctaaccactttagagataagata
aagaacaccaaagaaggcacatcagacacgcctgaagcgatggaaaccgacgaaaagtct
gccgcgtgcaccatggcttcctgcgcctatgacggcaccgtgtatctgtggaacttcagc
agcgaagccccgatggcgtccctagacgggcacgggccatcccgcgtgtcccgcgcggag
ttccacccttcaggacgatttctggccaccacagtttttgaccactcctggcggctttgg
gatttggagaccgcaactgaagtcctgcatcaagagggacacgcaaaacctgtgtacagt
gtcgccttccaaattgacggctctctcgctgtgactggatgtaaggtaccaacgcagcca
cggtcatttcttgctgacgtcatcgtacgacaagtcggcgaagctctggtccaacccagc
ctggcatccgctcaggaccttatcaggacatga
DBGET
integrated database retrieval system
