Ostrinia furnacalis (Asian corn borer): 114354526
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Entry
114354526 CDS
T07986
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu04512
ECM-receptor interaction
ofu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114354526
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114354526
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ofu04147
]
114354526
00536 Glycosaminoglycan binding proteins [BR:
ofu00536
]
114354526
Exosome [BR:
ofu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114354526
Glycosaminoglycan binding proteins [BR:
ofu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114354526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
114354526
NCBI-ProteinID:
XP_028162746
LinkDB
All DBs
Position
Unknown
AA seq
1809 aa
AA seq
DB search
MAVSVLWLVAALAPLGVITQDDGYAEWNNVDSQWPPREWNPPSPPAEVPRSYNTYGLSQR
PDVPPAPSRPPPSPGLNFAVYDPVTRQRTTAFDRNCTAPGCCVPKCFAEKGYRGFPGVPG
PQGERGMPGHEGIEGPQGPKGEKGQIGPQGPRGPKGERGKPGAQGFVGPVGKQGVQGESG
LPGIPGRDGCNGTDGEPGAPGPKGSQGPRGFTGPKGEKGGKGEPGYTGRYPKGQKGEPGA
DGMQGRQGAVGPSGPPGLQGPKGNTGPVGPAGFKGDKGAKGSKGLSIKGDKGDRGDRGDR
GASCPDITLPVATDSKGVIRGSPGDMGEKGSKGEPGIMGEKGDTGAMGEMGIPGLVGMKG
EKGIRGNPGERGRDGMYGAPGPMGQKGDRGSEGLPGLPGRPGSKGEPGRDGQTGPRGLKG
IPGPAGGRSGSRGPPGPMGPRGYPGPAGPKGTDGRPGDMGEAGPMGAPGGQGEPGSPGIE
GPAGHKGEKGEPGLDGLMGDIGPRGYDGPVGPQGPRGPKGDDGYSIPGQKGDGGIPGLHG
EKGQKGERGHTGARGIPGNSTLGIPGPPGEMGAPGERGEKGSPGLDGLPGNPGQKGDIGG
RCNECWPGGPGAKGDRGNNGFPGAPGERGPTGPNGTPGERGADGLNGFPGTPGAPGERGD
DGPIGPPGEPGRDATIPLDLTRGPKGEKGSQGPIGLTGPKGDRGPLGPKGDIGPIGMPGT
KGDQGDSGPPGADGIPGSDGFPGLPGIKGTSVKGEKGTPGDRGYKGDKGFPGRPGTRGEP
GHCAANLEELTRGDPGPRGDPGAQGPPGEPGEKGDKGGDGRPGEKGEIGLPGRTGPVGPR
GLPGPRGEKGDMGPIGFPGAPGLTGARGFPGVPGTKGDKGEIGPSMPGPQGPPGLSGLKG
EQGPRGFPGTPGDDGPPGPIGLIGEKGDRGFTGRVGQPGPFGQKGEPGPAGPPGLPGTPG
FPGKDGAKGQPGYPGLQGKPGVIGLPGLKGEPGILGREGPKGLPGMRGRPGIRGTPGVAG
IPGEKGDKGDIGLQGLPGQAGLDGPPGPIGAPGLKGDQGYPGPPGSTGRTGLTGEKGDRG
FQGLAGLKGEPGLASDKGEKGEPGIPGRSGLDGLPGERGDKGERGDTGLPGFGLPGPVGQ
KGDSGRPGRDGYPGPAGPKGDAGLSGLPGLKGDRGLPGINGQPGSPGMDGLPGEKGDVGL
DGYTGEKGDKGESGTPGQDGFDGLKGDRGPQGPPGLTGPIGYPGPKGDIGPPGPSLNVKG
EKGDIGYQGIPGAKGAKGERGLMGERGMEGQKGERGFTGQKGERGLNGYPGEKGDRGPAG
PEGMPGLTIVGEKGLPGLNGKHGRPGAPGIPGEKGDQGFPGLPGPTGVAGLNGRPGPQGE
KGDQGREGLAGPPGFDGQPGYPGPKGIMGVKGDKGERGLTGYGLPGEKGDQGLQGLPGAQ
GQKGDKGDRGLDGLDGQPGPIGVPGEKGNQGYPGRIGFTGQQGNKGQKGEPASIVFGPKG
EPGPRGPPGLNGLPGRDGSPGGPGLDGIPGEKGDRGYPGPMGPAGPPGPQGLQGLMGERG
EIGLTGKQGYPGAPGAPCQTQDYLTGTLLVKHSQSAEIPECDQGHVKLWDGYSLLYIDGN
EKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGEAIPMMPVEGNEI
AKYISRCSVCEVPANVIAIHSQTLDIPACPGGWSELWIGYSFVMHTGAGGQGGGQALASP
GSCLQDFRATPFIECNGEGGTCQHFANKLSFWLTTIEDNQQFASPRRSTLKSGRLLELVS
RCTVCIKNT
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccgtactgtggttagtagctgcgctggcgccgctgggagtgatcacacaa
gatgatggatatgcggaatggaataacgtcgattctcaatggccgcctagagaatggaac
cctccgtcgccgcccgccgaagttccacgctcatacaacacgtacggcttgtcgcagcgg
cccgacgtgccgcctgcgccctcgcgaccaccgccaagtccgggcctgaacttcgccgtc
tacgacccggtcaccaggcaacgcaccacagcatttgaccgcaactgcaccgcacctgga
tgttgcgttccgaaatgtttcgctgaaaagggttatcgaggtttcccaggtgttccaggc
ccgcaaggtgagagaggcatgcccggtcatgaaggaatagagggaccacaaggacctaaa
ggtgaaaagggacaaattgggccacaaggtccacgaggtcctaaaggagaacgaggaaaa
cctggtgctcaaggttttgttggtccggttgggaaacaaggtgttcaaggagagtctggt
ttgcctggtattcctggtagagatggctgtaacggtactgatggagagcctggtgcacct
ggtcccaaaggatcacaaggtcctcgcggttttactggaccaaaaggtgaaaaaggtggt
aaaggtgaaccaggttatacaggacggtatcctaaaggacagaaaggtgaacccggagct
gatggaatgcagggcagacagggagcagttggtccttctggacctcctggattgcaaggg
cctaaaggaaacacaggacctgtgggtccggctggctttaaaggtgacaaaggagctaaa
ggatctaaaggtttatcaataaagggagataaaggagaccggggagatcgaggtgacaga
ggggcttcatgtcctgatataacattgcctgttgcgacggattctaaaggtgtcatacga
ggaagtccgggagatatgggtgaaaagggttctaaaggagagccaggcattatgggtgaa
aagggtgacacaggagcaatgggtgaaatgggtataccaggtctagtaggcatgaaagga
gaaaaaggcataagaggaaatcctggagaacgtggtcgtgatggtatgtatggagctccc
ggcccaatgggacagaaaggagatcgtggctctgaagggttacctggacttcctggtcgt
ccaggtagtaaaggagaacctggtagagatggacaaacgggaccgagaggattgaaaggt
atacctggtccagctggaggtcgcagtggatctcgcggcccaccaggtcccatgggacct
agaggctatcctggccctgctggacctaagggcactgatggcaggcctggagatatggga
gaagctgggccaatgggtgcaccaggaggtcaaggagaaccaggttcgcccggtattgaa
ggtccagctggccacaaaggagaaaaaggagaacctggtctagatggtctaatgggtgac
ataggtcctcgaggatacgacggtccagttggacctcaaggcccaagagggccgaaaggc
gatgatggttattcaattcctggtcaaaaaggagatggcggtatacctggtctgcacggt
gaaaagggacaaaagggagaaagaggacacactggagcgagaggaatacctggaaattcc
acactaggaatacccgggcctccgggtgagatgggtgcccctggtgaaaggggtgagaaa
ggtagcccaggtttagatggtttacctggaaacccaggacaaaagggagacataggtgga
cgttgtaatgagtgctggccaggcggccctggcgccaaaggagatcgtggaaataatggt
ttcccaggtgcacctggagaaagagggcctactggccccaatggtacaccgggtgaaaga
ggagcagacggacttaacggtttcccgggtacacctggagcaccgggtgaacgtggtgat
gatggacctattggaccaccgggagaaccgggtagagatgctactataccactagattta
acaagagggcccaaaggtgaaaaaggatcgcaaggacctataggtttgacaggtcctaaa
ggtgacaggggtccactgggtcccaaaggtgatattggacctatcggtatgcctggaact
aaaggtgatcaaggagactcgggcccacctggagccgacggcatccccggtagcgatgga
ttcccaggtttaccaggaatcaagggaactagtgtcaagggagaaaaaggaacacctggt
gaccgggggtacaaaggagataaaggattcccaggacgtccgggaaccagaggcgaacca
ggtcactgtgcagctaatttggaagaacttactagaggagacccaggtccaagaggagat
ccgggtgcacaaggaccaccaggtgaacctggcgaaaaaggagataagggtggagatgga
cgtcctggtgaaaagggagaaattggtcttccaggtagaaccgggcctgtcggccctcgt
ggtcttccaggaccgagaggagagaaaggagatatgggtccgataggttttcctggggct
ccaggtcttactggcgctaggggcttcccaggagtaccaggaactaaaggagataagggt
gaaataggtccttcgatgcctggacctcaaggcccccctggattatctggtcttaaagga
gaacaaggcccaagaggattccctggtacacctggtgatgacggtccgcctggacccatt
ggattgattggagagaaaggtgatagaggttttacgggtcgtgttggtcagccggggcct
tttggacaaaagggagaaccgggaccggcaggaccacctggcttacctggaacaccagga
tttcccggaaaggatggcgctaaaggtcaaccaggttatcctggacttcaaggaaaaccg
ggtgtcattgggttgcctggtctaaaaggagaaccgggaatattaggccgcgaggggcct
aaaggattaccgggcatgcgtggcagaccaggaatacgtggaacaccaggcgttgccgga
ataccaggggaaaagggagataaaggtgacattggattacaaggactgccaggccaagca
ggccttgatggaccgcctggtcctataggtgcgccaggacttaagggagatcaaggttac
ccaggaccaccaggctcaacagggagaacaggtttaaccggagaaaaaggagatagaggt
ttccaaggactcgcaggtcttaagggtgaacctggattagcatctgataaaggagagaaa
ggtgaaccaggtataccaggcagaagtggactagatggtttaccaggagaaagaggtgat
aaaggagaacgtggtgatactggtttacctggattcgggctgccaggccctgtcgggcaa
aaaggtgacagtggtaggccaggtagagatggttatccaggaccagctggtccaaaagga
gatgcaggtctttcgggacttcccggcttgaaaggagacagggggctccctggtattaat
ggacaacctgggtcacctggaatggatggtttgccaggagagaaaggagatgttggctta
gatggttacacaggggaaaagggtgacaaaggtgaatctggaacacccggtcaagatgga
ttcgatggcttaaaaggagatcgtggtccacaaggaccccccggattaacagggcctatt
ggttatcctggtccaaagggtgatataggtccccctggtccgtcgctaaatgtcaaagga
gaaaagggtgacattggttatcaaggaataccaggtgccaaaggtgccaaaggagaaaga
ggattaatgggagagcgtggtatggaaggtcaaaaaggagaacgtggatttacaggccag
aaaggtgaaaggggattaaatggttatccaggagaaaaaggagacagaggccccgctgga
cccgaaggtatgcctggattgacaatagttggtgaaaaaggattacctggtcttaacggt
aaacacggacgtccaggcgcacctggtatccctggagaaaagggagaccaaggcttccct
ggactgccaggaccaactggtgtagctggtttgaatggacgacctggaccacaaggtgaa
aagggtgaccaagggcgagaaggcttagcaggacctccaggattcgatggacagccaggt
tatcctgggcctaagggtataatgggtgttaaaggagataaaggagaacggggtcttaca
ggatatggtttgccaggtgaaaagggtgatcaaggtctacaaggtttaccaggtgctcag
ggtcaaaaaggtgataagggtgatcgtggtttagatggtcttgatggacagccaggacca
attggcgtgcccggcgaaaagggtaatcagggatatccaggtcgtatcggttttacagga
caacagggtaataagggtcaaaaaggagaacctgcttctatagtttttggcccgaaagga
gaacctggaccacgtggtccacctgggctgaacggattgcctggacgagatgggtctccg
ggcggacccggtttagatggaatacctggagaaaagggtgatcgcggatatcccggtcct
atgggaccagcaggcccgcctggacctcaaggtctccaagggctgatgggcgagcgaggt
gagatcggactaacaggaaaacaaggttaccccggagcacctggggctccatgccaaacg
caagattacttaactggtactttattggttaagcacagccaaagcgcagaaataccagag
tgtgatcaagggcatgttaaattatgggatggatattctttactctacattgatggtaat
gagaaagcgcataatcaagatttgggctatgcgggttcttgcgtgagaaagttcagcacc
atgccgttcctattctgtgacttaaacgatgtatgtaattatgccagccgaaacgatcga
agctattggttgtctactggtgaagcgattcccatgatgcctgtggaaggaaatgaaatc
gcgaaatatatatccagatgttcagtctgtgaggtgcccgccaacgtcattgctatacac
agtcaaaccttagacattccggcgtgccccggaggatggagtgaactatggattggatac
agttttgtcatgcatactggcgccggtgggcaaggcggtggccaagctctggctagtcct
ggctcgtgtctgcaggacttccgtgcgacgccgttcatcgagtgcaacggcgaaggcgga
acttgccaacactttgcaaacaagctcagtttctggctgacaactatagaggacaatcaa
caatttgctagccccagacggtctacacttaaatctggaagattacttgagcttgtctcc
cgatgcactgtatgcatcaaaaacacttaa
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integrated database retrieval system
