Ostrinia furnacalis (Asian corn borer): 114354526
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Entry
114354526 CDS
T07986
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu04382
Cornified envelope formation
ofu04512
ECM-receptor interaction
ofu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114354526
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114354526
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
114354526
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ofu04147
]
114354526
00536 Glycosaminoglycan binding proteins [BR:
ofu00536
]
114354526
Exosome [BR:
ofu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114354526
Glycosaminoglycan binding proteins [BR:
ofu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114354526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
114354526
NCBI-ProteinID:
XP_028162746
LinkDB
All DBs
Position
Unknown
AA seq
1809 aa
AA seq
DB search
MAVSVLWLVAALAPLGVITQDDGYAEWNNVDSQWPPREWNPPSPPAEVPRSYNTYGLSQR
PDVPPAPSRPPPSPGLNFAVYDPVTRQRTTAFDRNCTAPGCCVPKCFAEKGYRGFPGVPG
PQGERGMPGHEGIEGPQGPKGEKGQIGPQGPRGPKGERGKPGAQGFVGPVGKQGVQGESG
LPGIPGRDGCNGTDGEPGAPGPKGSQGPRGFTGPKGEKGGKGEPGYTGRYPKGQKGEPGA
DGMQGRQGAVGPSGPPGLQGPKGNTGPVGPAGFKGDKGAKGSKGLSIKGDKGDRGDRGDR
GASCPDITLPVATDSKGVIRGSPGDMGEKGSKGEPGIMGEKGDTGAMGEMGIPGLVGMKG
EKGIRGNPGERGRDGMYGAPGPMGQKGDRGSEGLPGLPGRPGSKGEPGRDGQTGPRGLKG
IPGPAGGRSGSRGPPGPMGPRGYPGPAGPKGTDGRPGDMGEAGPMGAPGGQGEPGSPGIE
GPAGHKGEKGEPGLDGLMGDIGPRGYDGPVGPQGPRGPKGDDGYSIPGQKGDGGIPGLHG
EKGQKGERGHTGARGIPGNSTLGIPGPPGEMGAPGERGEKGSPGLDGLPGNPGQKGDIGG
RCNECWPGGPGAKGDRGNNGFPGAPGERGPTGPNGTPGERGADGLNGFPGTPGAPGERGD
DGPIGPPGEPGRDATIPLDLTRGPKGEKGSQGPIGLTGPKGDRGPLGPKGDIGPIGMPGT
KGDQGDSGPPGADGIPGSDGFPGLPGIKGTSVKGEKGTPGDRGYKGDKGFPGRPGTRGEP
GHCAANLEELTRGDPGPRGDPGAQGPPGEPGEKGDKGGDGRPGEKGEIGLPGRTGPVGPR
GLPGPRGEKGDMGPIGFPGAPGLTGARGFPGVPGTKGDKGEIGPSMPGPQGPPGLSGLKG
EQGPRGFPGTPGDDGPPGPIGLIGEKGDRGFTGRVGQPGPFGQKGEPGPAGPPGLPGTPG
FPGKDGAKGQPGYPGLQGKPGVIGLPGLKGEPGILGREGPKGLPGMRGRPGIRGTPGVAG
IPGEKGDKGDIGLQGLPGQAGLDGPPGPIGAPGLKGDQGYPGPPGSTGRTGLTGEKGDRG
FQGLAGLKGEPGLASDKGEKGEPGIPGRSGLDGLPGERGDKGERGDTGLPGFGLPGPVGQ
KGDSGRPGRDGYPGPAGPKGDAGLSGLPGLKGDRGLPGINGQPGSPGMDGLPGEKGDVGL
DGYTGEKGDKGESGTPGQDGFDGLKGDRGPQGPPGLTGPIGYPGPKGDIGPPGPSLNVKG
EKGDIGYQGIPGAKGAKGERGLMGERGMEGQKGERGFTGQKGERGLNGYPGEKGDRGPAG
PEGMPGLTIVGEKGLPGLNGKHGRPGAPGIPGEKGDQGFPGLPGPTGVAGLNGRPGPQGE
KGDQGREGLAGPPGFDGQPGYPGPKGIMGVKGDKGERGLTGYGLPGEKGDQGLQGLPGAQ
GQKGDKGDRGLDGLDGQPGPIGVPGEKGNQGYPGRIGFTGQQGNKGQKGEPASIVFGPKG
EPGPRGPPGLNGLPGRDGSPGGPGLDGIPGEKGDRGYPGPMGPAGPPGPQGLQGLMGERG
EIGLTGKQGYPGAPGAPCQTQDYLTGTLLVKHSQSAEIPECDQGHVKLWDGYSLLYIDGN
EKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGEAIPMMPVEGNEI
AKYISRCSVCEVPANVIAIHSQTLDIPACPGGWSELWIGYSFVMHTGAGGQGGGQALASP
GSCLQDFRATPFIECNGEGGTCQHFANKLSFWLTTIEDNQQFASPRRSTLKSGRLLELVS
RCTVCIKNT
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccgtactgtggttagtagctgcgctggcgccgctgggagtgatcacacaa
gatgatggatatgcggaatggaataacgtcgattctcaatggccgcctagagaatggaac
cctccgtcgccgcccgccgaagttccacgctcatacaacacgtacggcttgtcgcagcgg
cccgacgtgccgcctgcgccctcgcgaccaccgccaagtccgggcctgaacttcgccgtc
tacgacccggtcaccaggcaacgcaccacagcatttgaccgcaactgcaccgcacctgga
tgttgcgttccgaaatgtttcgctgaaaagggttatcgaggtttcccaggtgttccaggc
ccgcaaggtgagagaggcatgcccggtcatgaaggaatagagggaccacaaggacctaaa
ggtgaaaagggacaaattgggccacaaggtccacgaggtcctaaaggagaacgaggaaaa
cctggtgctcaaggttttgttggtccggttgggaaacaaggtgttcaaggagagtctggt
ttgcctggtattcctggtagagatggctgtaacggtactgatggagagcctggtgcacct
ggtcccaaaggatcacaaggtcctcgcggttttactggaccaaaaggtgaaaaaggtggt
aaaggtgaaccaggttatacaggacggtatcctaaaggacagaaaggtgaacccggagct
gatggaatgcagggcagacagggagcagttggtccttctggacctcctggattgcaaggg
cctaaaggaaacacaggacctgtgggtccggctggctttaaaggtgacaaaggagctaaa
ggatctaaaggtttatcaataaagggagataaaggagaccggggagatcgaggtgacaga
ggggcttcatgtcctgatataacattgcctgttgcgacggattctaaaggtgtcatacga
ggaagtccgggagatatgggtgaaaagggttctaaaggagagccaggcattatgggtgaa
aagggtgacacaggagcaatgggtgaaatgggtataccaggtctagtaggcatgaaagga
gaaaaaggcataagaggaaatcctggagaacgtggtcgtgatggtatgtatggagctccc
ggcccaatgggacagaaaggagatcgtggctctgaagggttacctggacttcctggtcgt
ccaggtagtaaaggagaacctggtagagatggacaaacgggaccgagaggattgaaaggt
atacctggtccagctggaggtcgcagtggatctcgcggcccaccaggtcccatgggacct
agaggctatcctggccctgctggacctaagggcactgatggcaggcctggagatatggga
gaagctgggccaatgggtgcaccaggaggtcaaggagaaccaggttcgcccggtattgaa
ggtccagctggccacaaaggagaaaaaggagaacctggtctagatggtctaatgggtgac
ataggtcctcgaggatacgacggtccagttggacctcaaggcccaagagggccgaaaggc
gatgatggttattcaattcctggtcaaaaaggagatggcggtatacctggtctgcacggt
gaaaagggacaaaagggagaaagaggacacactggagcgagaggaatacctggaaattcc
acactaggaatacccgggcctccgggtgagatgggtgcccctggtgaaaggggtgagaaa
ggtagcccaggtttagatggtttacctggaaacccaggacaaaagggagacataggtgga
cgttgtaatgagtgctggccaggcggccctggcgccaaaggagatcgtggaaataatggt
ttcccaggtgcacctggagaaagagggcctactggccccaatggtacaccgggtgaaaga
ggagcagacggacttaacggtttcccgggtacacctggagcaccgggtgaacgtggtgat
gatggacctattggaccaccgggagaaccgggtagagatgctactataccactagattta
acaagagggcccaaaggtgaaaaaggatcgcaaggacctataggtttgacaggtcctaaa
ggtgacaggggtccactgggtcccaaaggtgatattggacctatcggtatgcctggaact
aaaggtgatcaaggagactcgggcccacctggagccgacggcatccccggtagcgatgga
ttcccaggtttaccaggaatcaagggaactagtgtcaagggagaaaaaggaacacctggt
gaccgggggtacaaaggagataaaggattcccaggacgtccgggaaccagaggcgaacca
ggtcactgtgcagctaatttggaagaacttactagaggagacccaggtccaagaggagat
ccgggtgcacaaggaccaccaggtgaacctggcgaaaaaggagataagggtggagatgga
cgtcctggtgaaaagggagaaattggtcttccaggtagaaccgggcctgtcggccctcgt
ggtcttccaggaccgagaggagagaaaggagatatgggtccgataggttttcctggggct
ccaggtcttactggcgctaggggcttcccaggagtaccaggaactaaaggagataagggt
gaaataggtccttcgatgcctggacctcaaggcccccctggattatctggtcttaaagga
gaacaaggcccaagaggattccctggtacacctggtgatgacggtccgcctggacccatt
ggattgattggagagaaaggtgatagaggttttacgggtcgtgttggtcagccggggcct
tttggacaaaagggagaaccgggaccggcaggaccacctggcttacctggaacaccagga
tttcccggaaaggatggcgctaaaggtcaaccaggttatcctggacttcaaggaaaaccg
ggtgtcattgggttgcctggtctaaaaggagaaccgggaatattaggccgcgaggggcct
aaaggattaccgggcatgcgtggcagaccaggaatacgtggaacaccaggcgttgccgga
ataccaggggaaaagggagataaaggtgacattggattacaaggactgccaggccaagca
ggccttgatggaccgcctggtcctataggtgcgccaggacttaagggagatcaaggttac
ccaggaccaccaggctcaacagggagaacaggtttaaccggagaaaaaggagatagaggt
ttccaaggactcgcaggtcttaagggtgaacctggattagcatctgataaaggagagaaa
ggtgaaccaggtataccaggcagaagtggactagatggtttaccaggagaaagaggtgat
aaaggagaacgtggtgatactggtttacctggattcgggctgccaggccctgtcgggcaa
aaaggtgacagtggtaggccaggtagagatggttatccaggaccagctggtccaaaagga
gatgcaggtctttcgggacttcccggcttgaaaggagacagggggctccctggtattaat
ggacaacctgggtcacctggaatggatggtttgccaggagagaaaggagatgttggctta
gatggttacacaggggaaaagggtgacaaaggtgaatctggaacacccggtcaagatgga
ttcgatggcttaaaaggagatcgtggtccacaaggaccccccggattaacagggcctatt
ggttatcctggtccaaagggtgatataggtccccctggtccgtcgctaaatgtcaaagga
gaaaagggtgacattggttatcaaggaataccaggtgccaaaggtgccaaaggagaaaga
ggattaatgggagagcgtggtatggaaggtcaaaaaggagaacgtggatttacaggccag
aaaggtgaaaggggattaaatggttatccaggagaaaaaggagacagaggccccgctgga
cccgaaggtatgcctggattgacaatagttggtgaaaaaggattacctggtcttaacggt
aaacacggacgtccaggcgcacctggtatccctggagaaaagggagaccaaggcttccct
ggactgccaggaccaactggtgtagctggtttgaatggacgacctggaccacaaggtgaa
aagggtgaccaagggcgagaaggcttagcaggacctccaggattcgatggacagccaggt
tatcctgggcctaagggtataatgggtgttaaaggagataaaggagaacggggtcttaca
ggatatggtttgccaggtgaaaagggtgatcaaggtctacaaggtttaccaggtgctcag
ggtcaaaaaggtgataagggtgatcgtggtttagatggtcttgatggacagccaggacca
attggcgtgcccggcgaaaagggtaatcagggatatccaggtcgtatcggttttacagga
caacagggtaataagggtcaaaaaggagaacctgcttctatagtttttggcccgaaagga
gaacctggaccacgtggtccacctgggctgaacggattgcctggacgagatgggtctccg
ggcggacccggtttagatggaatacctggagaaaagggtgatcgcggatatcccggtcct
atgggaccagcaggcccgcctggacctcaaggtctccaagggctgatgggcgagcgaggt
gagatcggactaacaggaaaacaaggttaccccggagcacctggggctccatgccaaacg
caagattacttaactggtactttattggttaagcacagccaaagcgcagaaataccagag
tgtgatcaagggcatgttaaattatgggatggatattctttactctacattgatggtaat
gagaaagcgcataatcaagatttgggctatgcgggttcttgcgtgagaaagttcagcacc
atgccgttcctattctgtgacttaaacgatgtatgtaattatgccagccgaaacgatcga
agctattggttgtctactggtgaagcgattcccatgatgcctgtggaaggaaatgaaatc
gcgaaatatatatccagatgttcagtctgtgaggtgcccgccaacgtcattgctatacac
agtcaaaccttagacattccggcgtgccccggaggatggagtgaactatggattggatac
agttttgtcatgcatactggcgccggtgggcaaggcggtggccaagctctggctagtcct
ggctcgtgtctgcaggacttccgtgcgacgccgttcatcgagtgcaacggcgaaggcgga
acttgccaacactttgcaaacaagctcagtttctggctgacaactatagaggacaatcaa
caatttgctagccccagacggtctacacttaaatctggaagattacttgagcttgtctcc
cgatgcactgtatgcatcaaaaacacttaa
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integrated database retrieval system
