Ostrinia furnacalis (Asian corn borer): 114354738
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Entry
114354738 CDS
T07986
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03013
Nucleocytoplasmic transport
ofu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114354738
09122 Translation
03013 Nucleocytoplasmic transport
114354738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ofu03019
]
114354738
03041 Spliceosome [BR:
ofu03041
]
114354738
Messenger RNA biogenesis [BR:
ofu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114354738
Spliceosome [BR:
ofu03041
]
Complex C
Other components
EJC/TREX
114354738
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114354738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
PET122
Motif
Other DBs
NCBI-GeneID:
114354738
NCBI-ProteinID:
XP_028163082
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MGSFAKFVAEYCKSWEKSGKDQFIKYVTQSIKDEEKSPLFTKSGKLSGLSQNVYDLLLCG
LRGNLKRDAVLAVLREICALHADIPSIVLDVVCVLDAETCTDVQSEERTNFCYVVRELES
FMSDKLLKERLEIDTLQDVGTLKNKNFYTKFIKIKTKLYYKQRKFNLFREESEGYAKLIV
ELNQEISDDTEWKTLLEIIQSLIGCFNLDPNRVLDIILESFEARPHLEDLFIPLIKNYMG
DPHVISEVLGFKLGNMEVLDTYKEPPPIMTVIALLLQHRVISLDDIYPWLRPDDLLMAKE
AEKEFKTVQDYIRKLNIVSTKGPQANGPTEFVEEKADPQEYWSNQKLVLSEALLKVTAWR
EFAALYARLHTSSMPARPATALCAMLHALVEPLYRTHCRVAPKIYGKPIPPLPSPLAPAA
CKTFEDMKETVIPALILLGPSLHYDPILMYKIIRILRTSRSKPDDPLQHEALTVLDVAIL
PSLTLMEGNCCMAEEVYTLLKLYPYQCRYCLYSRWKNEAGERIPALMRVRGNSLQRIKHI
MKRVSKENIKPQGRLIGKLSHAAPAFLFDYMLLQIQTYDNLIGPVVESLKYLTSLSLDVL
GYCLLEALCAGRGAAGGAAHPPWLQALAAFAGAAFKKHNIELTALLQFVANRLKAQQSQD
LLILKEIVQKMAGIEAVEEMTSEQLDAMAGGELLKGEAGYFSQVRNTRRSSARLKEAIVG
NNLDISLCILSAQQRHCCVWKELEDEPASSGEPPGSQLKVVGRLADQCQDALVQLGTFLA
SSHAPDEYAARLPPLQELLRDYHVDADVAFFLHRPVLAQKIGAKVESLRKSAEVKNDSLE
KSIERYTAASKEVLEPVLLSVTPMLPSRVWEDISPEFYVTFWSLSMYDLRVPVESYDREV
DRLKAAAAIAAKDTSQGTKGKKEQERFNTLIDKLQEERRRQQDHVARVSARLQRECSGWF
PARAAKSAKNETVTRLMQLCLFPRCVFTATDALYCAEFVHTVHSLKTPNFSTLLCYDRLF
CDITYSVMSCTEGEAARYGTFLCKVLGTAMRWHGDKAAFHKECAHYPGFVTKYRVSNQFT
EANDHVGYENYRHVCHKWHYKITKAMVVCLDSGDYVQIRNALIVLIRVLPHFPVLEKLAQ
IIERKVDKVKEEEKTQRPDLYVLATGYSGQLRNKVPNMMRESDFHQVGDKHKVAAAAAPA
PAPPAKEEPALKHDQGVASPQQTAGKPTNQSHHHSVSSNEMTYRLM
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgggatcatttgctaagtttgtagcggaatattgtaaaagttgggaaaaatcaggaaaa
gatcaatttattaaatatgtgacacaatctatcaaagatgaagagaaaagtccacttttt
accaaatctggaaaactttctggtttatcccagaatgtatacgacttactgctttgtggt
cttcggggtaacctgaagagagatgcagtgcttgcagttcttcgggaaatttgtgcattg
catgcagatataccatcaattgtgttagatgtagtctgtgtattagacgctgagacatgc
actgatgttcagagtgaagaacgcacaaatttttgttatgttgtgagagaactcgaatct
tttatgtctgacaaattactaaaggaaagattagaaatcgacacattacaagatgttggt
acattgaagaacaaaaacttttataccaaattcattaaaatcaagacaaagttgtactat
aaacaacgtaaatttaatctgtttagagaagagagtgaaggatatgctaaattaattgtt
gaattgaatcaagaaataagtgatgatacagaatggaaaaccttactagaaatcattcag
tcacttataggatgtttcaatttagaccccaacagagtactagatattatactagaatca
tttgaagctcgaccacatttagaggatctgtttataccattgattaaaaactacatggga
gatcctcatgtgatatcagaagttttagggtttaagttaggcaatatggaggtcctggat
acgtacaaggaaccaccaccgattatgactgtaatagcactgcttttacaacatcgtgtc
atctctcttgatgacatttacccatggctacgtcctgatgatttgttgatggccaaagaa
gctgaaaaagaattcaaaacagttcaagattatattcggaaacttaacatagtgtctaca
aagggacctcaagccaatggacccaccgagtttgtagaagagaaagcagatcctcaggag
tactggagcaatcaaaagctggtcctaagcgaagcgttgctgaaggtgaccgcttggcgc
gagtttgcagcgttgtacgctcgcctgcacacgtcgtcgatgccggccagacccgccacc
gcgctatgtgccatgttgcacgcactagtggagccattgtacaggacccactgtcgtgta
gcccctaagatttatggtaaaccaataccaccgttgccatcgccacttgccccggctgca
tgcaaaacatttgaagatatgaaggaaacagtcatccctgcattgattttgttggggccg
tcacttcattatgaccccattttaatgtacaaaataatccgtattcttagaacatcgcga
tctaagcctgatgatcctctccaacatgaggcattaacagttcttgatgttgccatttta
ccgtcactgactttgatggagggaaactgctgcatggctgaagaagtttataccctcctc
aagttatatccctaccaatgcaggtattgcttgtactcccgttggaaaaacgaagccggt
gaaagaataccggctctgatgagagtgcgcggcaactcgctgcaaaggatcaagcacata
atgaaacgtgtttcgaaagagaacatcaagcctcaaggtcgcttgatcggaaaactgtcg
cacgctgctccggcgttcctctttgactatatgcttttacagatacaaacctacgacaac
ctgatcggtcccgtggtggagtcgctgaagtatctgacgtcactgtctctggacgtgctc
ggctactgcctgctggaagcgttgtgcgcgggccgcggcgcggcgggcggcgcggcgcac
ccgccgtggctgcaagcgctggctgccttcgctggagccgctttcaagaagcacaacatc
gaacttacagcgcttttgcagttcgtagcgaacaggctgaaggcgcaacagagccaagac
cttcttattttaaaagaaattgtccaaaagatggctggaattgaagcagtggaggaaatg
acttcagagcaactggatgctatggctggaggtgaactactaaagggagaggctggatat
ttctctcaagtccgcaacacacgcaggtcgtcagcgaggttaaaagaggccattgttggc
aacaatttggacatttcattatgtatactctcggctcagcaacgccactgctgcgtatgg
aaagagttggaggatgaacctgcttcaagtggagaaccaccagggtcccaactaaaggtg
gttggtagactggcagatcaatgtcaagacgccttagtacagctcggtacattcctggct
tcttcacacgctcccgatgagtatgcggccagattaccacctctacaggagttactacgc
gattatcatgtagatgccgacgttgcattcttcttacaccgtccagtgttggctcaaaaa
attggcgccaaagtggaatctctcagaaagagcgccgaagtgaaaaacgatagtctcgaa
aagagtatcgaacgttacaccgccgcttctaaagaggttttggagccggttcttttgtct
gtgacaccgatgctgccgtcgagagtgtgggaagatatttccccagaattctacgtgaca
ttttggtcactatcaatgtacgacttgcgagtgccggtggaaagctacgatcgcgaagtg
gaccgcttgaaagcagcggctgcgattgcggcgaaggatacctcgcagggtacaaaaggc
aaaaaggagcaagagcgttttaacacccttatcgacaaactgcaggaggagcgtcgtcgc
caacaagaccacgtggcgcgagtgtctgcgcggttgcagcgcgagtgtagcggctggttc
ccggcgcgcgcagccaagtccgccaagaacgagaccgttacacgtctcatgcaattatgc
ctgttcccgcgctgcgtcttcacagccactgatgcgctgtactgtgccgagttcgtgcac
acagtacactcgctcaagacgcccaacttctcgacgcttctgtgctatgataggctgttc
tgtgacataacgtactccgtgatgtcatgcacggagggtgaggcggcccgatacggcaca
ttcctgtgcaaagtgttgggcacagctatgcgttggcacggcgacaaggccgccttccac
aaggagtgcgcgcactatcccggcttcgtcaccaagtaccgcgtctccaaccagttcacg
gaggccaatgaccacgtcggctatgagaattacagacatgtgtgccacaagtggcactac
aagatcaccaaggctatggtggtgtgcctggattcaggcgactacgtgcaaatccgcaac
gcgctgattgtgttgatacgcgtcctgccacatttccctgtgcttgagaagttggcacag
atcatcgagaggaaagtggacaaggtaaaagaagaagaaaagactcaaagaccagatttg
tatgtgctggctaccggatacagtggtcaactacgcaataaggttcccaacatgatgagg
gaaagtgacttccaccaggtgggcgataaacataaagtagcggcggcggcggcgcccgcg
cccgcgcccccagcgaaggaagaacccgctttgaagcacgaccaaggtgtcgcctcgccg
cagcagactgcaggtaaacccacgaatcaatctcatcatcattcagtatcatcgaacgag
atgacataccgcttaatgtaa
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integrated database retrieval system
