Ostrinia furnacalis (Asian corn borer): 114355911
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Entry
114355911 CDS
T07986
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03030
DNA replication
ofu03420
Nucleotide excision repair
ofu03430
Mismatch repair
ofu03440
Homologous recombination
ofu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114355911
03420 Nucleotide excision repair
114355911
03430 Mismatch repair
114355911
03440 Homologous recombination
114355911
03460 Fanconi anemia pathway
114355911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ofu03000
]
114355911
03032 DNA replication proteins [BR:
ofu03032
]
114355911
03400 DNA repair and recombination proteins [BR:
ofu03400
]
114355911
Transcription factors [BR:
ofu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114355911
DNA replication proteins [BR:
ofu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
114355911
DNA repair and recombination proteins [BR:
ofu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
114355911
MMR (mismatch excision repair)
114355911
DSBR (double strand breaks repair)
HR (homologous recombination)
114355911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
PAS_8
Motif
Other DBs
NCBI-GeneID:
114355911
NCBI-ProteinID:
XP_028164758
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MTHNLSEGSLEIIMNGGHYDKPIMQVLGSKKIQGSGANERFRLLVSDGKHSHSFAMLATQ
LNDKLITGELSDYSVVQIDRFVTSLLKNTGKGEKRVMIILDITILKPGTDVGKKIGNPQT
WTEESAGSAPAQPAMQPVPKPASSPQPFSKPAPMANNNVSMNSSMLSSQMTHPIASLSPY
QNKWVIKARVMNKSPIRTWSNARGEGKLFSMDLCDDSGEIRATAFKNECDKFYDMIQVDK
VYYISRCQLKTANKQFTSLKNDYEMTFNSDTVVAECTEDSSSLPTVKYDFVPINMIAEKS
PDTIIDVIGVCKSVADLQELTAKSTGKLLKKREVTLVDSSGGAVVLTLWGAEAEKFEGST
NPVISAKGARLAEFNGSKSLSCLASTMLRLNPDLPEAHRLRGWYDNGGADMEIVNISAKS
GMYSGGSNEWLSFAEAEARQLGAGDKGDYYSLLGVLTFTFSDNAVYKACPQEACNKKLVD
QENGLFRCEKCNREYPNYKHRLLLGANVSDPTGDQRITAFNEAAEAMLGRSAAEIGQMFD
HDKTAYAQLFEEVKFRTFVFKFRTKMETYSDETRLKTTVMNAQPVDYKDGNTRLIKSIKE
VTGVEV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgactcataatttgtcagaaggttcgttggagattataatgaatggggggcattatgac
aaaccaatcatgcaagtgcttggtagtaagaaaatccagggtagtggtgccaacgaaaga
tttaggctgctggtgtcagatgggaagcattcacacagcttcgcgatgctcgccacacag
ctcaacgataaactgatcacaggagaattgtccgattattcagttgtacaaattgatcgc
tttgtgacatcactattgaaaaacacaggcaaaggcgaaaagagagtaatgataattcta
gacatcacaatcctaaagccaggaaccgatgtggggaagaagattggcaacccacagaca
tggacggaggaatcggctggatcggcccctgctcagccggctatgcagccagttcctaag
cctgcatcgtccccacaacccttctccaagccagctccgatggccaacaacaatgtgtca
atgaacagcagcatgttgtcatcacaaatgacccatcctattgccagtttgagtccatat
caaaataaatgggtaataaaagcacgagtcatgaacaaatccccaattcggacatggagc
aacgcccgaggagaaggcaagctgtttagcatggacctttgtgatgacagtggcgaaatc
agggccactgctttcaaaaatgagtgtgataagttttatgatatgatacaggttgataaa
gtatactacattagcagatgccagctcaaaacagcaaacaaacagtttacgagtctaaag
aacgactatgaaatgacgttcaattctgatacggttgttgctgaatgtacggaagactcc
tcatctctccccactgtcaagtatgattttgtgccaattaacatgatcgcagagaagagc
ccagacactatcattgatgttattggagtctgcaaatcagtggctgaccttcaagagctg
acagcaaaaagcacaggaaaactattgaaaaagagagaagtgactttagtggattcttct
ggtggtgcagttgtccttacattatggggagctgaagcagagaagtttgaaggaagcacc
aatcctgttatttctgcaaagggcgcgcgcttggccgagttcaacggcagcaagtcgctg
tcgtgcctggcgagcaccatgctgcggctcaaccccgacctgcccgaggcgcaccgcctg
cgcggctggtacgacaacggcggcgccgacatggagatcgtcaacatctccgccaagtcg
ggcatgtacagcggcggcagcaacgagtggctgtcgttcgcggaggccgaggcgcgccag
ctcggcgccggcgacaagggcgactactacagcctgttgggcgtgctcaccttcacgttc
agcgacaacgccgtatacaaggcgtgcccgcaggaggcgtgcaacaagaagctggtggac
caggagaacggcctgttccgctgcgagaagtgcaaccgcgagtaccccaactataagcac
cggctgctcttgggggcaaacgtgtcagacccgaccggcgaccagcgtatcacggcgttc
aacgaggcagccgaagccatgttgggccgcagtgccgctgaaataggccagatgttcgat
cacgacaagacggcctatgcgcagctcttcgaggaggtcaaattccgcaccttcgtcttc
aagttccgcaccaaaatggagacttatagcgatgagacccgattgaagactacagttatg
aacgcacaaccggtcgattacaaggatggcaacactcgacttataaaaagcataaaagaa
gttactggcgttgaagtttaa
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