Ostrinia furnacalis (Asian corn borer): 114356044
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Entry
114356044 CDS
T07986
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114356044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ofu03019
]
114356044
Enzymes [BR:
ofu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
114356044
Messenger RNA biogenesis [BR:
ofu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114356044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
RRM_1
Motif
Other DBs
NCBI-GeneID:
114356044
NCBI-ProteinID:
XP_028164929
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MEVTRKNFKDVLPLVQDSINKADFLVIDAEFTGLINGRDVSMFDSPSEYYSRLLKGSSEF
LLIQYGLCAFYWDKENRHYMNDAYNFYLFPRGRPGPEKMFMCQSSSLDFLASQGFDFNKL
IKEGISYMTEPTETRLRELLTERQKNYSNEKDTITIPEENKPQIEDVCNRVRKFLDDEDS
DELEVDRCNAFIRRLLFQELGTRFKGEAAVETKVLENKNRVLKVVRLKEGDDSKSRDTQK
KEREWEDFEAAVGFSKVARMISQSEKLVIGHNMLLDVLHTLNHFFQPLPDDYESFKEFTH
CMFPSLLDTKYMSSLPPFKDRVNSSVLQHLFTTLAEEPFSMPVTESKDGRGYCRSEDKNH
EAGYDAYVTGLCFLSMYSHLCKMRGEDSGRVLPNCPVLKPFLNKLFLAKTAHQDSPYMNF
NGDDPSPSRDHVFHLTFPREWLRTDINQLFSPFGPVTVQFIDDTTAIIALSRRDQARDVM
RALAHHSRTKLVPFTRYKHALAKFHDHRHPSPVKQVPTPDKKVRQSVNKKVVNSPQPQPS
PQPQSQPPLLPQVANSPVKQSRVRSSSVSSPTSTPPTQPTRKRTSSGVFQVDDAEPPPKK
AEIMRSNSDGSQKKPEVRPNSDGSQKKSEAVSNGRRKTDLADGDKDRHKEKVKQKETKKP
IEQFDITAKTKTVSAFKESDSWD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgactcgtaaaaattttaaagacgttttgcctctcgtacaggattcaattaat
aaagctgacttcctggtgatagatgcagagttcaccggcctcataaacggtcgagatgta
tctatgtttgattctccatctgagtattattcccggctgttgaaggggtctagtgagttt
ttgctgatccagtatgggctgtgcgcgttctattgggacaaagagaaccggcattacatg
aacgatgcgtataacttctacttatttccccgcgggaggccaggacctgagaaaatgttt
atgtgccagagttccagcttagatttcttggcatcacaaggatttgactttaacaagctt
ataaaagaaggtatttcctatatgacagagccaacagagaccagactgcgtgagctgttg
actgaaagacaaaaaaactattcaaatgaaaaggacactattacaatacctgaagaaaat
aaaccacaaatagaagatgtatgcaatcgtgttcgtaagttccttgatgacgaagactcg
gatgaactggaggtagaccgctgcaatgccttcatccgacggctgctattccaagaactg
gggacacgtttcaaaggagaagccgctgtggaaaccaaggttttagagaataaaaacaga
gtgcttaaagtggtgcgcctcaaagaaggcgacgactcgaagagtcgggacacacagaag
aaagaaagggagtgggaggactttgaagctgccgttgggttctctaaagtggcgcggatg
atcagtcagtctgaaaagctggtgataggccacaacatgctgttggacgtgctgcacaca
ctcaaccactttttccagccgctgcctgacgactatgagtcgttcaaggagttcacgcat
tgcatgtttccaagcttgctagacacgaagtacatgtcgagcctgccgcccttcaaggac
agggtgaattccagcgtgctgcagcaccttttcaccaccctggccgaagagcccttctcg
atgcccgtgacagagtcaaaagatggccgcggctactgtcgctcggaagacaagaatcat
gaggctggttacgacgcctacgtcacgggtctctgcttcctctcaatgtactcgcatctc
tgcaagatgaggggcgaggactccggccgcgtattgcctaactgccctgtgttgaagccg
ttccttaacaagctgtttttggcaaagacggcgcaccaggactcgccctacatgaacttc
aatggagacgacccatcaccttcgagagaccacgtgttccacttgaccttccccagggag
tggctcaggactgacatcaatcagctgtttagccctttcggtccagtcacagttcagttt
atagacgacacgacggccatcatcgcgctgtcgcggcgcgaccaggcgcgtgacgtcatg
cgtgcgctcgcgcaccactcgcgcaccaagctggtgcccttcacccggtacaagcacgcg
ctagccaagttccacgatcatcggcatccatcgccagtgaagcaagtacctacgccagac
aaaaaagttcgtcaaagcgtgaacaaaaaagtggtcaactcaccacaaccgcagccatca
ccgcaaccgcagtcgcaaccgccactgctaccgcaagtggccaattcgcctgtcaagcag
agcagagtgcggtcaagcagcgtgtcttcgcctacgtccactccgcctacgcagcccaca
aggaagagaacttcttctggagtattccaggtcgatgatgcggaaccacccccgaagaag
gccgaaataatgaggtctaactcagacggttcccaaaagaaaccggaagtgaggcctaac
tcagacggttctcaaaagaaatcggaagcggtctccaacggtcgccggaagacggacctc
gccgacggagacaaggataggcataaagagaaagtgaaacagaaagagacaaaaaaaccc
atagagcaattcgacattacagcgaaaaccaaaacagtgtctgctttcaaagagagcgac
agttgggattaa
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