Ostrinia furnacalis (Asian corn borer): 114356541
Help
Entry
114356541 CDS
T07986
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114356541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ofu03041
]
114356541
Enzymes [BR:
ofu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114356541
Spliceosome [BR:
ofu03041
]
Complex A
U2 snRNP components
U2 related factors
114356541
Complex B
114356541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
CdAMP_rec
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
114356541
NCBI-ProteinID:
XP_028165550
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MVRSGRDRDRDRERSRRSPSRSATPERKRRRSRSRSRDRSSKSSKRKRSRSRDRESKRDR
DSHRDRKSDKRDDKRNGTSSKSSRKKSPDKDRSKSREKAVKNEPVEYDIGSADKEEEQSR
LEQEMQKRRDRIERWRAERKRKELESAKKEVQKGSIVSNIQVPAVKKWSLEDDSGDEGED
GESKEKQAAEEKKEKEDEIDPLDAYMQEVQQEVRKVNQMDQAKGIISVPTTGGTGIVILT
GTAKKKVTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANLASKQRKELAKVDHASLQY
MPFRKAFYTEVNELSRMTSDEVEAYRTELEGIRVKGKGCPKPIRTWAHCGISKKELDILK
KLGFEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQPPLEDTDGPIS
LIMTPTRELCMQIGKDIKKFAKSLGLRVVCVYGGTGISEQIAELKRGAEMIVCTPGRMID
MLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMKIIDNVRPDRQTVMFSATFPRQME
ALARRILQKPIEIQVGGRSVVCKEVEQHVAILEEDAKFFKLLELLGLYSQMGSIIVFVDK
QENADSLLKDLMKASYSCMSLHGGIDQFDRDSTIVDFKSGKVKLLVATSVAARGLDVKQL
VLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAWTFLTPEQGRYAGDVLRAFELAGVTPPVE
LRQLWEKYKDAQEKDGKKVHTGGGFSGKGFKFDESEAQAATEKKKYQKAALGLQDSDDED
VEGDLDQQIEVMLAAKKIVKEIKPGVGAPGLPAGAAAPSGADGKLELARRLASRINLAKG
LGAEQKGATQQAAEAILKGAPSAHTLITAKTVAEQLAAKLNTRLNYQPRDESASEPAEEV
FRKYETELEINDFPQQARWRVTSKEALALISEYSEAGITVRGTYVPPGKQPPEGERKLYL
AIESSQELAVAKAKSEITRLIKEELLKLQTSAHHMVNKARYKVL
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggttaggagtgggcgtgaccgcgaccgagatcgcgaacgtagtagacgctctcctagt
agatcagcaactccagagcgaaaacggagacgatcccgctccaggagtcgtgacaggagc
tccaagtcttctaagaggaagcgtagtcgcagcagagaccgtgaatctaagagagataga
gacagtcacagggatcgtaagagtgacaagcgggatgacaaacggaatggaaccagtagt
aagtcgtccaggaaaaagtccccagacaaagacaggtctaagtcgagagagaaggcagtc
aaaaatgaacctgtggaatatgacattggatctgctgataaggaagaagaacagagcaga
ttggaacaagagatgcaaaagcgtcgcgatcgcatcgagagatggcgcgctgagcgcaaa
cgcaaagaactggagtccgctaaaaaggaggtgcagaaaggcagcatcgtttcaaacatt
caagtgcccgctgttaaaaaatggtctttagaggatgactctggggacgaaggtgaagat
ggtgaatccaaagagaaacaagctgccgaagaaaagaaagagaaagaagacgaaattgat
cctctagatgcgtatatgcaagaagtgcaacaggaggtgcgtaaagttaaccagatggac
caagcgaaaggaataatcagtgtaccaacaacaggtggcactggaattgtcattctcact
ggaactgctaagaaaaaggtcacggaacagaagaacaaaggggagctgatagaacagaac
caagacggtctggagtattcctcagaggaagaaacggaggatataaaggatgcagcagcg
aacctcgcatccaaacagaggaaggagctggctaaggtggaccatgccagtcttcaatac
atgccttttaggaaggcattctacacagaggtcaacgaactatcaaggatgacgtcagac
gaagtggaggcgtatcgaacagaactggaaggcatccgagtgaagggcaagggctgcccc
aagcccatcaggacttgggcccactgtggcatcagcaaaaaagagctggatatactgaag
aagctgggctttgagaaaccaacgcctatacaggctcaggctatacctgcgattatgtct
ggaagggacctaataggcatagcaaagacaggctcaggcaagacccttgccttcatcctg
cctatgttcagacatgtcctggaccagcctcctttagaggacacagacgggcctatatcc
ctcatcatgacgcctacgagggaactgtgcatgcagattgggaaggatataaagaagttt
gcgaagtccttgggactgagggtcgtgtgcgtttatggtggcacgggcatatcggaacag
atagcagaattaaaacgcggtgcagaaatgatagtgtgtactccaggccgcatgatagac
atgttggcggccaactcggggcgtgtgaccaaccttcgacgcgtcacatacattgtattg
gacgaagccgatcgaatgtttgacatgggatttgagccacaggtaatgaagatcatagac
aacgtgcggccggatcggcagacggtgatgtttagcgctaccttcccgcggcagatggag
gctctagcgcggcggatactgcagaaacctattgagatacaggtcggcggcagaagcgta
gtgtgcaaagaagtggagcaacacgtggccattctagaagaagacgcgaagttcttcaaa
cttctggaacttctgggcctgtacagccaaatgggcagcattatagtcttcgtggataag
caggagaatgccgacagtcttctcaaggacctgatgaaggcttcttactcctgcatgagc
ctgcatggagggattgatcaattcgacagggactccaccatcgtggacttcaaatcgggc
aaggtgaagctgcttgtcgctaccagtgtagctgcgagaggcctcgacgtcaaacagctg
gtgttggtcgttaactacgactgcccgaaccactacgaggattatgtgcatagatgcggc
aggaccggccgagcaggcaacaagggcttcgcctggacattcctaacgccagaacaaggg
cgctacgcgggcgacgtgttaagggcgttcgaactcgctggagtcacccctcccgtcgag
ctacgccagttgtgggagaagtataaggatgctcaagaaaaggatgggaagaaggtgcac
actggtggaggatttagtggcaaaggattcaaattcgacgagtccgaagcccaagcggct
acagagaagaagaaataccagaaggcggccctcgggctccaagactcggatgatgaagac
gttgagggtgatctggaccaacagatcgaggtgatgctcgccgccaagaagatcgtcaag
gaaattaagcccggcgtgggcgctcccggcttaccagcaggcgcagcagcgcctagcgga
gccgatggaaaacttgaactggctcgaagactagcgtcacgtattaacttggccaaaggg
ctaggtgccgagcagaagggcgccacgcaacaagccgccgaggctatactgaagggcgcg
ccgtccgcacacacgcttatcactgcaaagaccgtagccgagcaactggctgctaaactc
aacactcgtctcaactaccagccgcgcgacgagagcgcgtccgaaccggctgaagaagtg
ttccgcaagtacgaaaccgagctcgagatcaacgacttcccgcagcaggcccgctggagg
gtcaccagcaaggaggcgttggcgcttattagcgagtacagcgaggctggtataaccgtc
aggggtacatacgtgcccccgggcaaacagccgcccgaaggcgaacgcaaactgtacctc
gccatagagagctcccaggaactagccgtggcgaaagccaagtcggagatcacgcggctc
ataaaggaggagctcctgaaactgcagacctccgcccaccacatggtcaacaaggctaga
tataaggtcctttaa
DBGET
integrated database retrieval system
