Ostrinia furnacalis (Asian corn borer): 114358457
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Entry
114358457 CDS
T07986
Name
(RefSeq) collagen alpha-1(I) chain-like isoform X1
KO
K19719
collagen type II alpha
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu04512
ECM-receptor interaction
ofu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114358457
04518 Integrin signaling
114358457
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ofu00536
]
114358457
Glycosaminoglycan binding proteins [BR:
ofu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114358457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
FnI_RECK
PSP94
Motif
Other DBs
NCBI-GeneID:
114358457
NCBI-ProteinID:
XP_028168230
LinkDB
All DBs
Position
Unknown
AA seq
1482 aa
AA seq
DB search
MWWSWLVLAALALPAACKELAHDAVEPQAQEPDLESYDEYSPLDEDDNAILAERDFRMST
NLPPIRPSTRTPPPAQRCIDIGRAWAEGEHWKRDNCTLCQCFGGRINCTQLAACLTNPVP
SSRPERPLVPVRGVAGLPGEEGPSGPPGAPGVNGVPGSPGMPGPIGPMPDVNAYLAQLAA
ASGGDKGPAFDPYAYMQASVGQPGIRGIPGPQGPPGPQGFQGPRGEPGEPGLPGLQGTPG
ERGPQGPPGKDGSPGEDGEPGPAGTAGQTGPRGAPGVPGIQGLKGHRGFDGKDGAKGEQG
LPGEKGPTGLPGQMGPAGPLGPVGPRGERGREGPPGPPGMRGADGAIGAPGPMGNIGKPG
APGFPGTPGMKGEQGAFGPKGSQGLQGLRGESGRPGQSGDAGPPGIAGRDGIPGEKGVQG
QPGATGPQGFPGPRGTPGVAGDPGIPGSKGMPGQPGERGIKGDSGPRGESGSPGPRGLPG
IIGPEGKRGKRGLRGPAGNVGPPGERGLNGLRGLPGPDGQMGPKGQPGERGGVGLPGTKG
SSGDPGRPGPQGIQGARGPVGRPGITGKTGPQGERGIPGADGRPGEQGSQGLQGPPGLMG
SPGERGLQGEPGKDGEPGQAGPQGPKGDAGRDGNPGIQGPQGASGPSGERGPPGPAGQTG
FPGMPGSAGLPGSPGKEGEMGVAGPAGPPGPSGPRGERGFPGERGLPGQAGATGEKGESG
AQGPDGPPGPEGPRGSKGHPGPVGAMGMPGLRGMTGSPGEKGERGSAGPPGNDGPPGRQG
EQGPQGPTGPAGPPGEPAERGEPGVAGVPGESGAPGSPGERGQPGMQGAPGLSGPPGLTG
MPGLKGDRGYSGAKGQQGSPGSPGVPGEPGLRGLPGQAGAKGARGEQGHKGEAGHAGLPG
RPGDLGPPGPQGSTGPAGTPGIPGAKGATGDSGRPGPSGPQGLTGPAGLEGPKGERGSEG
ESGPQGLTGPPGPAGERGPAGLPGMLGPPGSPGLRGSQGESGIPGKPGADGAPGPVGPPG
LQGPPGQMGEPGPEGRPGKQGQPGISGRPGDKGPIGQPGPSGPQGPPGLQGPPGPTGQSG
PAGERGPRGESGPPGVDGPQGPAGKQGAPGLDGTKGERGEAGLNGAKGHAGLPGLPGMVG
APGRQGERGLPGPGGPPGKDGEPGHRGPAGRDGNPGLQGPAGPAGGRGAPGDAGRHGPPG
PAGPPGPPGPPGEGLAYDAAAIAAMLQQGSVKGPDPLGDDPNSMPPRFFSEDMSAAERKE
IVMKAYERLKVSLNKFLKPDGSKEAPAKTCADIKYHHPGFESGQYWIDPNGGDLNDAIMV
HCDMDTGSSCVYPKPMQSKDITYKGKDKEVWLSEMEEGFTITYKADHSQLTYLQLMSAHA
TQNVTFHCRNTVGFYDPATRNHRHGIKLLAYNDAEILPKANNRLRYKALLDECQFKKNTW
AKTVVHFDTDKSGRLPLLDVGVRDLGRANQEFRVELGLACFS
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggagttggctggtgctagcggcgctggcgctgccggcggcgtgcaaggagctg
gcgcacgacgccgtggagccgcaggcgcaggagcccgacctcgagagctacgacgagtac
tcgcctctcgacgaagacgacaacgctatcctcgctgaacgagacttcagaatgtcgaca
aaccttcccccaattcgcccttctacacgaactccaccaccagcgcagcgttgcatcgac
atcgggcgcgcctgggccgagggcgagcactggaagcgagacaactgcaccctctgccag
tgcttcggtggccgcatcaactgcactcagcttgccgcttgtctcaccaatccagtaccc
tcaagcagaccagaaaggcctttagtaccagtaagaggcgtggccggactccctggtgaa
gagggcccgtcaggacctccaggagcaccaggtgtcaacggagtccctgggtctccgggc
atgccggggcctatcggaccaatgcctgatgtgaacgcgtacctagcgcaactggcggcg
gcatcaggaggcgataaagggcctgccttcgacccatatgcgtacatgcaagcttctgtt
ggacaacccggcattagaggaataccaggaccacaaggcccgcccggcccgcaaggcttt
caaggtccgagaggagaacccggtgaaccgggtttacctggattacaaggaacacccgga
gaaaggggacctcaaggaccacctggaaaagatggatcacccggagaggatggagaaccc
gggccagccggaacagcaggacagacgggaccccgtggcgcccctggagtgcccggtatt
caaggtcttaagggtcaccgcgggtttgacggcaaggatggcgctaaaggtgaacaggga
ctgcctggagaaaagggacctactgggctaccgggtcaaatgggaccggctggaccactt
ggtcctgtaggaccaaggggtgaacgtggccgagaaggtcctcccgggccaccaggaatg
cgtggagctgacggtgctattggagcacctggaccaatgggtaacatcggaaaacctggt
gctcctggcttccctggaactccgggaatgaaaggcgaacaaggagctttcggacccaaa
ggaagtcagggcttacagggcctacgtggtgaatctggccgaccaggacaatcaggtgac
gctggaccccctgggattgctggacgtgatggaatacctggcgaaaagggtgtacaagga
caacctggagccactggccctcaagggttccctggaccacgtggtacacctggagtagct
ggagacccaggaatccctggatcaaaaggcatgccgggacaaccaggggaaagaggtatc
aaaggagattcgggtcctcgaggtgaatcaggatctcctggtcctaggggattacccggc
attatcggtcctgaaggcaaaagaggcaaacgaggcttgagaggccctgctggcaatgta
ggccctccaggagagagaggtttgaatggattaagaggtttgcctggtcctgatggtcaa
atgggtccaaaaggtcagccaggggaacgtggaggagttggtctacctggaacaaaaggt
agctctggtgatcctggaagacctggaccacagggaatacaaggtgctagaggacctgtt
ggcagacccggtattacaggcaagactggcccgcaaggagaaaggggtattcctggtgct
gatggtcgtcctggtgaacaaggatcccaaggattacaaggaccacctggacttatgggc
agccctggagaaagaggcttgcagggagaaccagggaaagatggtgaacccggtcaggca
ggaccacaaggacctaaaggcgatgctggacgagatggaaatcctggaatacagggaccg
caaggagcttctggtccttctggcgagagaggtccacctgggccagctggacagactggt
tttccgggtatgcctggatcagctgggttaccagggtcaccgggtaaagaaggtgaaatg
ggtgtagcaggaccagcagggcctccaggaccttcgggtccacggggagaaagagggttc
ccaggggaacgtggattgccgggacaagctggagcgacgggagaaaagggagagtcagga
gcccagggccctgatggaccaccgggcccagaaggtccaagaggcagcaagggacaccca
ggtccagtaggcgcgatgggaatgccgggattgcgaggtatgactggctcaccgggagag
aagggcgaacgaggatcggctggacccccaggcaatgatgggccaccaggtcgtcaaggt
gaacaaggaccacaaggacctactggcccagccggtcctccgggtgaaccagcagagcgg
ggtgaacctggtgtggctggcgtccccggtgaatctggcgcccctggctctcctggtgaa
aggggccagccgggaatgcagggcgctcctggcctctcaggacctccgggtctcactggc
atgccagggctaaagggtgaccgcggatactctggagcgaaaggacaacaagggtcaccg
ggtagcccaggtgtacctggagaacctgggcttcgtgggctcccagggcaagccggcgcg
aagggagctcgtggtgaacagggacataaaggagaggcaggacacgcgggtctgcccggc
aggcctggagatctaggacctccaggtcctcaaggcagcactggccctgcgggaacacca
ggcatacccggcgctaaaggagcaactggagattctggaagaccaggcccttcgggacct
caaggattaacaggacccgcaggtcttgagggacctaaaggcgaaagaggtagcgaaggc
gaatcgggaccccaaggattaactggacctccgggtcctgcaggagagagaggaccggct
gggcttccaggaatgttaggacctccagggtcaccagggcttcgtgggtcacagggtgaa
agcggaatccctggaaaacccggtgcagatggagctccaggacccgttggaccaccaggc
ttacaaggcccgcccgggcaaatgggagaaccaggacctgaaggacgaccaggcaaacaa
ggacaacctggaatatcgggacgaccaggagataagggaccgattggacagccaggtcct
tctggaccccagggaccacctggtctgcagggtccaccaggcccaactggacagtcaggg
cctgccggcgaacgtgggccgcgtggtgaatctggtcctcctggtgtcgatggaccacaa
ggtccagcgggcaaacaaggagcacctggtttagacggcacaaagggcgaacgcggtgaa
gcgggattaaatggcgctaaaggacatgcgggcttgccaggtctacctggtatggttgga
gctcccgggaggcaaggtgaacgagggttgcctgggccgggtggaccgcccggaaaagat
ggcgaaccaggacatagaggacccgctggtcgtgatggcaatcctggacttcaaggacca
gctggccctgccggaggtcgcggggccccgggagacgcagggcggcacggaccacctgga
ccggctggtcctcccggcccccctggccctcctggagaaggcttggcttacgacgctgct
gctattgctgctatgcttcaacagggctcagtcaaggggccagacccactgggcgatgat
cctaactcgatgccacctcgattcttcagcgaagacatgtcagctgctgagaggaaagaa
atcgtgatgaaggcgtatgaacgactaaaggtgtccctcaataagttcctgaaacctgat
ggatcaaaggaagcaccagctaaaacatgcgcggacatcaagtatcaccatccaggattt
gaaagtgggcaatactggatcgacccgaatggtggggacctgaacgatgctatcatggtg
cactgcgacatggacactggcagcagctgcgtttatcccaaacccatgcagtctaaggac
attacttataagggcaaagataaagaagtctggctaagcgagatggaagaagggttcacg
atcacatacaaagcggaccactcccaactgacatacctgcagctgatgtcagctcacgcc
actcagaatgtgaccttccactgccgcaacactgtgggattctatgaccccgccacaagg
aaccaccgccacggaatcaagttgttggcttataacgacgctgagatcttgcctaaggcc
aacaacaggttgaggtacaaggcgctactggatgaatgccaattcaagaaaaacacctgg
gcgaagacagtagtgcacttcgatacggacaagtcaggacggctgccactcctggatgtg
ggagtcagggacttgggaagagctaaccaggagttccgcgtggagctgggccttgcttgc
ttcagctag
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