Ostrinia furnacalis (Asian corn borer): 114358579
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Entry
114358579 CDS
T07986
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03018
RNA degradation
ofu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114358579
09123 Folding, sorting and degradation
03018 RNA degradation
114358579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ofu03019
]
114358579
03041 Spliceosome [BR:
ofu03041
]
114358579
Messenger RNA biogenesis [BR:
ofu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114358579
mRNA degradation factors
5'-3' decay
Lsm complex
114358579
Spliceosome [BR:
ofu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
114358579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
114358579
NCBI-ProteinID:
XP_028168379
LinkDB
All DBs
Position
Unknown
AA seq
141 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDTQIKARGRSEVSKGRGGGQNMRTGGRGTGRGAFGNRGR
PGPLNRGGGNAGRNPQNKNKK
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgttaccattatcgctattacgaacggctcaaaaccacccaatgttggtggagttgaag
aatggcgaaacatacaacggccatttagtttcttgtgataattggatgaatatcaacctc
agagaagtgatctgcacgtcgcgggacggagacaagttctggaggatgccagaatgctac
attcggggcagtacgatcaaatatttgaggattcctgacgaggtgatagacatggtgaaa
gaagatacgcagattaaagcaagagggcgaagcgaggtgtccaagggccgtggtggaggc
cagaacatgaggactggtggccgagggaccggcagaggcgctttcggcaaccgcgggcga
ccaggacccctaaacagaggtggcgggaacgcaggccgcaatccacagaataaaaataaa
aaataa
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