Ostrinia furnacalis (Asian corn borer): 114360791
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Entry
114360791 CDS
T07986
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03013
Nucleocytoplasmic transport
ofu03015
mRNA surveillance pathway
ofu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114360791
09122 Translation
03013 Nucleocytoplasmic transport
114360791
03015 mRNA surveillance pathway
114360791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ofu03019
]
114360791
03041 Spliceosome [BR:
ofu03041
]
114360791
Enzymes [BR:
ofu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114360791
Messenger RNA biogenesis [BR:
ofu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114360791
Spliceosome [BR:
ofu03041
]
Complex C
Other components
EJC/TREX
114360791
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114360791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114360791
NCBI-ProteinID:
XP_028171389
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MADNDELLDYDEDEEQAEQQTTEGAADAVPKKEVKGSYVSIHSSGFRDFLLKPEILRAIV
DCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSENHVYVLVMCH
TRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALVN
SKKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKK
FMQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCI
ALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEVQDRFDVNITELPEEIELS
TYIEGR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggccgataacgacgaacttctcgactacgacgaggatgaagagcaggcggaacagcag
actaccgagggggcggcagacgcggttcccaagaaagaggttaagggttcttacgtatca
atccacagctctggcttcagagattttctcttgaaaccggagattttgagagcaatcgtc
gactgcggtttcgagcatccttcagaagtccagcatgagtgcattccacaagctgtattg
ggcatggacattctgtgtcaagcgaagtccggtatggggaaaacggccgtgtttgtttta
gcaacattgcagcagctggaaccgtctgagaatcatgtttacgtgctagttatgtgccac
actcgtgagttggccttccagatcagcaaagagtatgaaagattctcaaagtacatgtct
ggtgtacgtgtgtccgtgttctttggcggaatgcccatccaaaaggatgaggaagtgctg
aagaccgcctgcccgcacatcgtcgtgggaactcccggcagaatcttagctttagtcaac
agcaagaaattaaacctgaaacatctaaaacacttcatcctggacgagtgtgacaaaatg
ctggaatctctggacatgaggcgcgacgtgcaggagatatttaggaacaccccacacgga
aaacaagttatgatgttctccgctactttgagcaaggaaattcgaccagtgtgcaagaaa
ttcatgcaggatcctatggaggtgtacgtagatgacgaggccaagctgacactgcacgga
ctgcagcagcattacgtgaagttgaaggaaaacgagaaaaacaaaaagcttttcgagctg
ttggatgttttggaattcaaccaagttgtgatatttgtgaagtcagtgcaacgttgtata
gcactagctcaattgctgacagatcagaacttccctgctattggaatccacagaaacatg
actcaagatgagcgtctttctcgttatcagcaattcaaggacttccagaagcgaatcctt
gttgccaccaacctgtttggacgaggaatggatattgagcgagtgaacatagtattcaac
tatgacatgcctgaagactcggacacctacttacatcgagtggctcgcgccgggcgattt
ggtaccaagggtttggccataaccatggtatctgatgaaaacgatgccaagatcctgaat
gaagtgcaagaccgtttcgatgtgaacataacggagttgcctgaagagatagagctgtct
acctacattgagggccgataa
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