Ostrinia furnacalis (Asian corn borer): 114361628
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Entry
114361628 CDS
T07986
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03022
Basal transcription factors
ofu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114361628
09124 Replication and repair
03420 Nucleotide excision repair
114361628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ofu03021
]
114361628
03400 DNA repair and recombination proteins [BR:
ofu03400
]
114361628
Enzymes [BR:
ofu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
114361628
Transcription machinery [BR:
ofu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114361628
DNA repair and recombination proteins [BR:
ofu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114361628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
Motif
Other DBs
NCBI-GeneID:
114361628
NCBI-ProteinID:
XP_028172539
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MGPPKKFKKYDSKPGSDRSGKKKKVEEDMTIDLVDDENTENVGVPGAAMQDAEKNDQVPD
DEFGAKDYRNQMELKPDNASRPLWVAPNGHIFLEAFSPVYKHAHDFLIAIAEPVCRPQHI
HEYKLTAYSLYAAVSVGLQTGDIVEYLQRLSKCTVPAGIIEFIQLCTLSYGKVKLVLKHN
RYLVESKHVEVLQKLLKDPVIQQCRLRRDGDEDFLASALPNKTATAAVPGAAKPADDKPA
ANGTVPDDISQFYQQLDKDDDDDETTDIVANTAVAFEVDPDKIEVIQKRCIELEHPLLAE
YDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAV
CTVRKRALVLCNSGVSVEQWKQQFKCWSTADDSMICRFTSEAKDKPMGAGILITTYSMIT
HGQRRSWEAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLGLTATLLRED
DKIADLNFLIGPKLYEANWLELQANGYIARVQCAEVWCPMTPEFYREYLIQKINKKMLLY
VMNPSKFRACQFLVRYHERRGDKTIVFSDNVFALRHYAVKMNKPYIYGPTSQSERIQILQ
NFKFNPKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRILRAKKGALAEE
YNAFFYTLVSQDTLEMAYSRKRQRFLVNQGYSYKVITELKGMEQEPDMFYGSREEQGMLL
QQVLAASETDCEDEREGGPGGVGGTARRGGALSSLAGADDALYLEHRRGPANKHPLFKKF
RC
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggacctcctaagaaattcaaaaagtatgactctaaacctggaagtgacagatcaggt
aagaaaaagaaagtggaagaagatatgactatagacctggtggatgatgaaaatactgag
aatgttggagtgcccggagctgctatgcaggatgctgaaaagaacgaccaagttcctgat
gatgaatttggagcaaaagattacaggaaccaaatggaattgaagccagataatgcaagt
cgtcccttatgggtggcaccaaacggtcacatatttcttgaagcattttctccagtttac
aaacatgcacatgactttctgattgcaatagcagaaccagtttgcaggcctcaacacatt
catgaatacaaattgacagcttacagtctgtatgcagctgtgtctgtagggttacagacc
ggtgacattgtagagtacctgcaaaggctcagcaagtgcacggtgcctgctggaatcata
gaatttatccaactttgtacattatcttatgggaaagtgaagctggttcttaaacacaac
aggtatctagttgagagcaaacatgttgaagtgttacagaagttgctcaaagaccctgtg
atacaacagtgtaggttacgcagggatggtgatgaagattttctagcgtctgcactaccc
aacaaaacagcaacggccgctgtacccggtgctgctaagccagctgatgacaaaccagcc
gcaaatggtactgtaccagatgacatcagccagttttatcaacagctcgacaaagacgac
gatgatgatgaaaccactgacattgtagcaaacacagcagtcgcttttgaagtagatcct
gacaaaattgaggtaatacaaaaaagatgtattgaactggaacatccgttactagcagaa
tacgattttcgtaatgattctgtaaatccggatatcaatattgatctgaaaccgacagct
gtgcttcgtccctaccaagagaagagtttgaggaaaatgtttggcaacggtagagcaagg
tcgggcgtgatcgtgctgccgtgcggcgcgggcaagtcgctggtgggcgtgacggcggtg
tgcacggtgcgcaagcgcgcgctcgtgctgtgcaactccggcgtgtcggtggagcagtgg
aagcagcagttcaagtgctggtccacggccgatgacagcatgatctgcaggttcacatca
gaagcgaaggacaagccgatgggcgcgggcattctaatcaccacgtattccatgatcacg
cacggccagcggcgttcctgggaagcggaacagaccatgaaatggctgcaggcccaggag
tggggactggtggtgctggacgaggtgcacaccatccccgccaagatgtttcgccgtgtg
ctcaccatcgtgcactcgcacgccaaactcggtcttactgcaacgctccttcgtgaagac
gacaaaatcgctgatctgaacttcttgatcggaccgaagttgtacgaggctaactggttg
gagctgcaggctaatggatatatcgcgcgtgtgcagtgcgctgaagtgtggtgtcctatg
acaccagagttctaccgcgagtacctcatacaaaagatcaacaagaaaatgttgctatac
gtcatgaacccatcaaaattccgtgcctgccaatttctggtccgctaccacgagaggcgc
ggcgacaaaaccatcgtattttccgacaacgtattcgcactgcgacattacgcggtaaaa
atgaacaagccctacatctacgggcctacgtcgcaaagcgagcggattcagatcctgcaa
aacttcaaattcaacccgaaagtgaacacgatattcgtcagtaaagtggcggacacgagt
ttcgatctgcccgaggcaaacgtgctgattcagatctcttcgcacggcgggtcccggcga
caggaggcacagagattgggtcgaatcttgagagcgaaaaaaggcgccttagcagaggaa
tataatgccttcttctatactttggtatcccaggacacattagaaatggcgtacagtcgt
aagcgacagcggttcttagtcaaccaaggttatagttacaaggtaattacagaattgaaa
ggaatggagcaagagccagatatgttttatggatcacgcgaagagcaagggatgctgttg
caacaagtgctagcagcgtccgagaccgactgcgaggacgagcgcgagggtggcccaggt
ggcgtgggagggacggcgagacgcggcggcgccctgtcgtcgctggccggcgccgacgac
gcgctgtacttggagcaccggcgcgggcccgccaacaagcacccgctcttcaagaaattt
cgctgctag
DBGET
integrated database retrieval system
