Ostrinia furnacalis (Asian corn borer): 114363491
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Entry
114363491 CDS
T07986
Name
(RefSeq) pre-mRNA-processing factor 6 isoform X1
KO
K12855
pre-mRNA-processing factor 6
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114363491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ofu03041
]
114363491
Spliceosome [BR:
ofu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
114363491
Complex C
U5 SnRNP specific factors
114363491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_16
HAT_Syf1_CNRKL1_C
TPR_17
FAT
TPR_CcmH_CycH
ARM_TT21_2nd
ARM_TT21
TPR_12
TPR_21
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
114363491
NCBI-ProteinID:
XP_028175020
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MSVPPQAFVNKHKKHFLGIPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPA
AKRKKTEEEDDDEDLNDSNYDEFSGYSGSLFSKDPYDKDDAEADAIYESIDKRMDEKRKE
YREKRLKEDLERYRQERPKIQQQFSDLKRELKQVSEDEWAAIPEVGDARNRKQRNPRAEK
FTPLPDSVLSRNLGGESTSSIDPGSGLASMMPGVMTPGMLTPSGDLDLRKIGQARNTLMT
VKLSQVSDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAW
VASARLEEVTGKIQSARNLIMKGCEVNPSSEELWLEAARLQPPDTARAVIAHAARNLPHS
VRIWVKAADLEQETKAKRRVFRKALEHIPNSVRLWKAAVELENPEDARILLSRAVECCPT
SVELWLALARLESYENARKVLNKARENIPTDRQIWVTAAKLEEAHGNTHMVEKIIDRAIT
SLSANGVEINREHWFKEAMEAEKSGAVHTCQAIIRAVIGHGIEPEDQKHTWMEDAEACAN
EGAYECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLEALLQRAVAHCPKSEVLWL
MGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENKEYDRARRLLAKARASA
PTPRVMIKSAKLEWALNNLEVALKLLEEAIKVFGDYAKLHMMKGQIEEQMNKDEDAHNTY
TQGLKKCAASVPMWILLSRLEEKLKHVTKARSVLEKARLRNPKNAELWLESVRLERRNGS
VEIANAVMAKALQECPNAGRLWAEAIFMESRPQRKTKSVDALKKCEHDAHVLLAVSQLFW
TERKLNKCREWFNRTVKIDPDLGDAWAYFYKFELLHGNEQQQEDVKSRCKTAEPHHGERW
CAVSKDIASWCFSTEQILLLVAKSLPVPT
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgccgccacaggcgtttgtgaataagcataaaaagcatttccttggcattcca
gcgccgttaggttatgtagctggtgttggaagaggggctactggtttcaccacccgatct
gatattggcccggcccgagatgccaacgatgtatccgatgaccgccacgctccaccggct
gccaaaaggaaaaaaactgaggaagaggatgatgatgaagatcttaatgactccaactac
gatgagttctctggatacagcggatcattgttctcaaaggatccttatgacaaagatgac
gctgaagctgatgcaatttatgaatccatagacaaacgcatggatgaaaaacgaaaagaa
tacagagagaagcgtctgaaagaagacttggaaagatatcgtcaagagaggcccaaaatc
cagcagcagttttcagatcttaaacgagagttaaagcaagtatctgaagatgaatgggca
gccatcccagaagtcggagatgctcgcaacaggaaacaaaggaaccctcgtgctgagaag
ttcacacctttacctgacagtgtgttgtcaaggaatttaggaggggagtctacttcgtcc
atagatcctgggtctggtctggcgtcaatgatgcctggtgtgatgactccaggaatgtta
acaccatcaggtgatctggatctcaggaagatcggtcaagccagaaatacacttatgact
gtcaaattgtcacaagtgtcagattcagtcactgggcagaccgttgtagatcccaaaggc
tacttgacagatctacagtctatgatccctacgtatggtggggatataaacgacatcaag
aaagctagattattgctgaagtctgtaagagagactaatccgaaccatccgcctgcttgg
gtagctagtgctagattggaagaagtcacaggcaagatccagtctgcccgtaacctaatc
atgaagggctgtgaagtgaacccaagcagcgaggagttgtggctggaagcggctcgcttg
cagccgcctgacacagctagagccgtcatagcgcacgcggctaggaacctgccgcatagt
gtcaggatatgggtgaaagctgctgacctggaacaagaaactaaggcaaaacgccgcgta
ttccgcaaggccttagaacacattcccaactcggtccgtctctggaaagcagccgtcgag
ttggagaaccctgaagacgccaggatcctactatcccgagcggtggaatgttgtcccact
agcgtcgagctgtggctagccctggccaggctggagagctatgagaacgcaaggaaggtt
ctcaacaaggccagagagaacatacccacggatagacagatctgggtgactgcggctaag
ttggaagaggctcacggcaacactcacatggtggaaaagatcatagaccgtgcgatcacg
tcgctcagcgcaaatggtgtggaaatcaatcgcgagcactggttcaaagaggcaatggaa
gcagagaaatcaggagcggtacacacatgccaggccatcattcgtgctgttatcggtcat
ggtatagagcccgaagaccagaaacacacttggatggaagatgctgaagcttgtgcaaac
gaaggagcgtacgagtgtgcgcgggccgtatacggatacgctctgtcagtcttcccgtct
aagaagtccatttggctccgagccgcctacctcgagaagcaacacggcaccagagctagc
ctcgaagccttgctgcagagagccgtagcccactgccccaagtccgaagtgctttggcta
atgggggccaagtccaagtggcttgctggtgacgtccccgcggcgcgtggtattctttcg
ctggctttccaggccaaccccaactctgaggagatctggctcgccgccgtcaagttggag
agtgagaataaggagtatgatagagccaggcggctgctggccaaagcacgggcttctgct
cctacgcctagggtaatgataaagtctgcgaaactagaatgggcactaaataatctagaa
gtagctctaaagttattagaagaggctatcaaagtgttcggcgactacgcgaaactgcac
atgatgaaaggccaaatagaggaacaaatgaacaaagatgaggacgcgcataacacttat
acacaggggctgaagaaatgtgcagccagcgtgccaatgtggatacttttgtcaaggcta
gaagagaaattaaaacacgtcactaaagcgagatcagtgcttgaaaaggctagattgagg
aatccaaagaatgctgaattatggctagagagtgtaagactggaaaggcggaacggcagt
gtggagatagcaaacgctgtgatggcgaaagctttgcaagagtgccccaacgccggccga
ctgtgggccgaggccatcttcatggagtctcggccgcagaggaagactaagagcgtggac
gcgctaaagaagtgcgagcacgatgctcacgtgctactcgcggtgtctcaactgttctgg
acggagaggaagctcaacaagtgtcgggaatggttcaacagaacggtaaaaatcgacccg
gacttaggcgacgcgtgggcttacttctacaagttcgagttactacacggcaacgagcaa
cagcaagaagatgtcaaatctcgctgcaagaccgccgagcctcaccacggggagcgctgg
tgcgccgtctccaaggatatcgccagttggtgctttagcactgaacagatactgctactg
gtggccaagagcctgccagtgcccacttaa
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