Ostrinia furnacalis (Asian corn borer): 114365185
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Entry
114365185 CDS
T07986
Name
(RefSeq) exosome complex exonuclease RRP44 isoform X1
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114365185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ofu03019
]
114365185
Messenger RNA biogenesis [BR:
ofu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
114365185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
PIN_4
CSD2
Dis3l2_C_term
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
114365185
NCBI-ProteinID:
XP_028177485
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNVCPHKDDEYVLESNPESICALFD
YPHYLVLDTNVVLHQMDILEEDALSNVIILQTVLEEVKHQNTAIFQRLLEVIGNKKRKFY
SFVNEHHKDTYIERGPGEKQNDRNDRAIRKASSWYASHLSANNVGGNFPKIVLLTDDESN
RKIAQEEGIVCCSVKDYIENVNGFVGLVDKLSKNVIPESCSKDALYPAHLTPTQIHTGIR
NGKLYQGTFHASRDNFLEGTVTVNGFEKPILLQGHIGINRAVDGDLVAVEIFPEEEWRKP
SDIVLEDKADDPGDLLEEETVLLKTAKPVDNSKDEITPTGKVVGIIRRKWRQYCGILMPS
KFPGATRHLFTPAEKRIPRVRIETRQSDILASQRILVALDSWPRNSRYPLGHFVRALGPI
GDKDAENEVILLEHDVPHARFSEAVLNCLPPNDWTIPEEEIKKRVDLRSICICSVDPPGC
TDIDDALHARPVAGKTADGLSKYEVGVHIADVTYFVRPETALDKEAASRSTTVYLVDRRI
DMVPDLLSSNLCSLRGGEERLAFSCVWEIDENANVLSTKFHKSVIKSAAAMTYEEAQIAI
DDSARQDNIASSLRVLNALAKKLKRKRLDNGALLLASPEIRFQVDSETHDPIEVQAKKIV
DTNSMVEEFMLLANVSVAEKLAAEFPQCALLRRHPAPPPANFTAFLKAAAQQGFEIDVST
NKSFSASLDKAQVPGRPFFNTLLRIMATRCMQQAVYFSSGTRAHDEFYHYGLACPIYTHF
TSPIRRYADVIVHRLLAACIGEDMTHASLLDTKHADSICDNLNYRHRQAQYAGRASVALN
THILFKNRVEIEAAVVLSVKRNALQVLIPKYGLEGPLYLPADRFTYNEEEHFQICDGIIL
KTFDELTVRLSLDSTNLQHRKLVFQLVEPHIPGFSYVPEQAMDVETIEVKTETKSSEEKV
ETKKRKDAKDSKVKKKAKK
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgtggactactaaaacatttctaaccaaaactaaacgcggcaacatcttaaagattgtt
agggagcattacctccgtgatgatttgctttgtggctcagctgcgtgtaatgtttgcccg
cacaaagacgatgagtatgtgttggagtccaaccctgagtccatttgtgccttatttgac
tatcctcactatttagtactggatactaatgtggttctacaccaaatggatatcctagaa
gaggatgcgctctcgaacgtgataatactgcagacagtgcttgaagaggtcaagcaccag
aatacggcaatcttccaaaggctcttggaagtaattggcaacaaaaagaggaagttttat
tcctttgtgaatgagcatcacaaagatacatacatagagcgaggcccaggtgaaaaacaa
aacgacaggaatgaccgggcaatccgtaaagcgtccagttggtacgcctcacacttgtca
gctaacaatgttgggggcaattttcccaagattgtgttgctaacagatgatgaatcaaat
agaaaaattgcacaagaggaggggattgtttgttgttctgtaaaagattacatagaaaat
gtcaatggctttgtgggactagtggataaactctccaagaatgtaataccagagagttgc
tccaaagatgccttgtaccctgctcacttgacaccgacccaaatacacactggtatccgt
aacgggaaactgtatcaaggaacgttccacgcttcccgtgacaatttccttgaaggtact
gttactgtcaacggttttgaaaaacctattctactgcaaggtcatattggaattaacaga
gcagttgatggtgacctggtggctgttgaaatattccctgaagaagaatggcgcaaaccc
agtgacatagtcttggaagacaaagctgatgaccctggggacttactggaggaagaaact
gtacttttgaaaactgctaagccagttgataacagtaaggatgagatcactcccactgga
aaagtggtgggcattataaggaggaaatggagacagtattgtggtattttgatgcctagt
aaattcccaggggcaactcgccacctcttcacaccagctgagaagcggatcccaagagtg
cgaatcgaaacgcgccagagcgacatcctcgcgtcgcaacgcatactggtcgcgctggac
tcctggccacggaacagtcggtacccgttggggcatttcgttagagcccttgggccgatt
ggtgacaaagatgcagagaacgaagtgattctcctggagcatgacgtgcctcacgcgagg
ttcagcgaagccgtgctcaactgtctgccgcccaacgactggactatccctgaagaggaa
ataaaaaaacgcgtcgacctccgctccatttgcatctgctctgtggacccgcccggctgt
acggatatcgatgacgccttgcacgcgcggcccgtagcgggcaagaccgccgacggtctg
tccaagtacgaggtcggcgtccatattgctgacgtcacgtacttcgtcaggcctgagacg
gcgttagataaggaggctgcctcgaggtctactacagtgtatttagttgacagaaggatt
gacatggttccagatctgctaagttctaacctctgctccctgcgcggcggtgaagagagg
ttggccttctcttgcgtttgggagatcgacgaaaacgccaacgtgctctctaccaagttc
cacaagagtgttataaagtctgcagcagcgatgacgtatgaagaagcgcagatagcgata
gatgacagcgctcgacaggacaacattgcgagctcgctgcgagtattgaacgcattagcg
aagaaactaaagcgaaaacgtctcgacaacggggcgctgttgctcgcctcgcccgagatt
cggttccaggtggactccgaaacccacgacccgatagaagtgcaagcgaagaagatagtg
gacacaaactccatggtcgaagagttcatgttgttagccaacgtcagcgtggccgagaaa
ctcgcggcggagtttccacagtgcgcgctactgaggcgccaccccgcgccgccgcccgcc
aacttcaccgccttcctcaaggcggccgcgcagcagggcttcgaaatagacgtatccacc
aacaagtccttctccgcgtccctcgacaaagcgcaagtgccgggccggccattcttcaac
acgctcctgcgcatcatggcgacccgttgcatgcagcaagcagtgtatttctcaagcggg
acgcgcgctcacgatgagttctaccactacgggctggcctgtcccatctatacgcacttt
acatcacctatcagacgttatgctgacgtcatcgtgcatcggctactcgcggcctgcata
ggggaagacatgacacatgcgtcactacttgacactaagcatgcggactcaatatgcgac
aaccttaactaccgccatagacaagctcagtacgctggcagagcgtctgtagcattgaac
acacacatcctgttcaagaaccgcgtggagattgaagcggctgtagtattatcagtcaag
cggaacgcgctgcaagtccttatacccaagtacgggttagagggaccgctatacctgccc
gctgataggttcacatacaacgaggaggaacacttccaaatctgcgatggaatcattcta
aaaaccttcgacgagctaacggtgcgactcagtttagacagcacaaacttacaacacaga
aaactggttttccaactagtcgagccacatatcccaggcttcagctacgtgccagaacaa
gctatggacgtggaaacgatagaagtgaaaacggaaacgaaaagtagtgaagagaaagtg
gaaacgaaaaagagaaaggacgcgaaagactctaaagttaagaagaaggctaagaagtaa
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