Otolemur garnettii (small-eared galago): 100941007
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Entry
100941007 CDS
T07855
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
oga
Otolemur garnettii (small-eared galago)
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oga04121
]
100941007 (PDZRN3)
Enzymes [BR:
oga01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100941007 (PDZRN3)
Ubiquitin system [BR:
oga04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100941007 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-C3HC4_4
zf-TRAF
zf-RING_5
TRAF3_RING
Prok-RING_4
zf-TRAF_2
PDZ_Tricorn
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
100941007
NCBI-ProteinID:
XP_003785538
Ensembl:
ENSOGAG00000031641
UniProt:
H0XZV5
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCANAARGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPNVDNQDGSSSEGIFVSKIVDSGPAAKEGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDAGTQT
DITFEHIMALAKMSSPSPPVLDPYLLPEEHSSAHEYYDPNDYIGDIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDATASSNPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCTDADCLGIPVDECERFRELLELKCQVKSAA
PYGLYYPGGALDAGKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYRESWM
LHHSGFRNYNTSVDVRRRELSDITELPEKSDKDSSSAYNTGESCRSTPLTLELSPDNSLR
RVAEGGGEGALGTAEAYGPAPKNLLAIREDPEVGTPNYSPSAQELDPSQALESRERRGSD
GSRSPTPGPKLGSAYLPAFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVS
MCKDLTSSSPSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDAV
SEMKMGRYWSKEERKQHLVKAKEQRRRREFMLQSRLDCLKEQQAADDRKEMNILELSHKK
MMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcgctg
tgccacaaggtcctggaggaccccctgaccacgccgtgcggccacgtcttctgcgctggc
tgcgtgctgccctgggtggtgcaggagggcagctgcccagcgcgctgccgcggtcgcctg
tccgccaaggaactcaaccacgtcctgccactcaagcgcctcatcctcaagctggacatc
aagtgcgcgaacgcggcgcgcggctgcggccgggtggtcaagctgcagcagctgcccgag
cacctcgaacgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggcccgtgggc
cgctgccaggagggctgcgggctgcccctgacgcacggtgagcagcgcgctggcggccac
tgctgcgctagggcgctgcgggcgcacaacggcgcgctgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgcgcgggcaagcgagagaagtcgctggtggct
cagctggccgccgcgcagctcgagctgcagatgaccgcgctgcgctaccagaagaagttc
accgagtacagcgcacgcctagactcgctcagccgctgcgtggccgcgccgcccggcggc
aagggtgaagaaaccaaaagcctgactctggtcctgcatcgcgactctggctccctggga
ttcaatattattggtggccggccaaacgtggacaaccaagatggatcgtccagtgaagga
atctttgtatccaaaatagttgacagtgggcctgcagccaaggaaggaggcctgcaaatt
catgacaggattattgaggtcaacggcaaagacttatccagggcaactcatgaccaggct
gtggaagcattcaagacagccaaggagcccattgtggtacaggtgttgaggagaacgccg
aggacaaaaatgttcacacctccttcagagtcacagctggtggacgcgggaacccaaacc
gacatcacctttgaacacatcatggctctcgccaagatgtcctctcccagcccacccgtg
ctcgatccctatctcctgccagaagagcattcctccgcccatgaatactacgatccaaat
gactacattggggacatccaccaggagatggacagggaggagctggagctggaggaagtg
gacctctacagaatgaacagccaggacaagctgggcctcaccgtgtgctaccggacagac
gacgaagatgacattgggatttatatcagtgagattgaccctaacagcattgcagccaag
gacgggcgcatccgagaaggagaccgcattatccagattaatgggatagaggtacagaac
cgtgaagaggctgtggctcttctaaccagtgaagaaaataagaacttttcattgctgatt
gcaaggcctgaactccagctggacgaaggctggatggatgatgacaggaatgactttctg
gatgacctgcacatggacatgcttgaggagcagcaccaccaggccatgcagttcacagcc
agtgtgctccagcagaagaagcatgaggaagatggtgggaccacagacaccgccaccatc
ttgtccaaccagcacgagaaggacagcggagtggggcggacagatgagagcacacgcaac
gacgagagctcggagcaggagaacaacggtgacgatgccactgcgtcctccaacccgctg
gcggggcagaggaagctcacctgcagccaggataccctgggcagcggcgacctgcccttc
agcaatgagtccttcatctcggctgactgcaccgacgccgactgcctggggatcccggtg
gacgagtgcgagcgcttccgcgagctcctggagctcaagtgccaggtgaagagcgccgcc
ccctacggcctgtactacccgggtggcgcactggacgccggcaagagcgaccccgagagc
gtggacaaggagctggagctgctgaacgaggagctgcgcagcatcgagctggagtgcctg
agcatcgtgcgcgcccacaagatgcagcagctcaaggagcagtaccgcgagtcctggatg
ctgcaccacagcggcttccgcaactacaacaccagcgtggacgtgcgcaggcgcgagctc
tcggacatcaccgagctcccggagaagtccgacaaggatagctcgagcgcctacaacacg
ggcgagagctgccgcagcaccccgctcaccctggagctctcccccgacaactccctgagg
agagtggccgagggcggcggcgagggcgccctggggaccgcggaagcttacgggccagcc
ccaaagaaccttctggccatcagggaggatcccgaagtgggcacccccaactacagcccg
tcagcgcaagagctggaccccagccaggccctggagagcagagagcggagaggcagcgac
ggcagcaggagccccacgcccggcccgaagctgggcagcgcctacctgcccgccttcccc
cactcgccctacaagcacgcgcacatcccggcgcacgcgcagcactaccagagctacatg
cagctgatccagcagaagtcggccgtggagtacgcgcagagccagatgagcctggtgagc
atgtgcaaggacctgacctcctccagcccgtcggagccgcgcatggagtggaaggtgaag
atccgcagcgacggcacgcgctacatcaccaagaggccggtgcgggaccgcctgctgcgc
gagcgcgccctcaagatccgcgaggagcgcagcggcatgaccacggacgacgacgcggtc
agcgagatgaagatgggccggtactggagcaaggaggagaggaagcagcacctggtgaag
gccaaggagcagaggcggcggcgcgagttcatgctgcagagcaggttggattgtctgaag
gagcagcaggctgctgacgacaggaaggagatgaacatcctcgaactgagccacaaaaag
atgatgaagaagcggaacaaaaagatctttgataactggatgacaatccaggaactctta
acccacggcacaaaatccccagacggcactagagtatacaattcgttcttgtcggtgact
actgtataa
DBGET
integrated database retrieval system
