Otolemur garnettii (small-eared galago): 100942101
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Entry
100942101 CDS
T07855
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100942101 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oga03041
]
100942101 (SF3B1)
03036 Chromosome and associated proteins [BR:
oga03036
]
100942101 (SF3B1)
Spliceosome [BR:
oga03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
100942101 (SF3B1)
Complex B
100942101 (SF3B1)
Complex C
U2 SnRNP specific factors
100942101 (SF3B1)
Chromosome and associated proteins [BR:
oga03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
100942101 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
HEAT_EZ
Htt_N-HEAT_1
Motif
Other DBs
NCBI-GeneID:
100942101
NCBI-ProteinID:
XP_023372657
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSCASQHKGHSEPDGSFPQIYCTLV
LLLFFSAGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVVNGAAASQ
PPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGATPGS
KIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTERDTPGHGSGWA
ETPRTDRGGDSIGETPTPGAIQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYV
PIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDV
DESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSP
TLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAK
AAGLATMISTMRPDIDNMDEYVRNTTARAFLYEYLGEEYPEVLGSILGALKAIVNVIGMH
KMTPPIKDLLPRLTPILKNRHEKVQENICFELLELLKAHKKAIRRATVNTFGYIAKAIGP
HDVLATLLNNLKVQERQNRVCTTVAIAIVAEMCSPFTVLPALMNEYRVPELNVQNGVLKS
LSFLFEYIGEMGKDYIYAVTPLLEDALMDSIVVNVCDLQLDMMSYVLGLFHPARKVRDVY
WKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagactcacgaagatattgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgac
caggaaatttatggtggaagtgacagcagatttgctggatacgtgacatcaattgcagca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgcttggtcagaag
aagccaggatatcatgcccccgtggcattgcttaatgatataccacagtcatgtgcaagt
cagcacaaggggcatagtgagcctgatggaagctttcctcagatttattgtactcttgtc
ctgttgctgttcttttctgcaggagggaagacacctgatcctaaaatgaatgctaggact
tacatggatgtaatgcgagaacagcatttgactaaagaagaacgagaaattaggcaacag
ctagcagaaaaagctaaagctggagaactaaaagtcgtcaatggagcagcagcgtcccag
cctccgtcaaaacgaaaacggcgttgggatcaaacagccgatcagactcctggtgccact
cccaaaaagctgtcaagttgggatcaggcagagacccctgggcataccccttccttacga
tgggatgagacaccaggtcgtgcaaagggaagcgagactcctggagcaactccaggctca
aaaatatgggatcctacaccaagccacacaccagcaggagctgctactccgggacgaggc
gatacacctggtcatgctacaccaggccatggaggtgcaacatccagtgctcgtaaaaac
agatgggatgagacccccaaaactgaaagagatactcctgggcatggaagtggatgggct
gagactcctcgaacagatagaggtggtgattcgattggtgaaacgccgactcctggagcc
attcaggcttggcgatgggaaagagaaattgatgagagaaatcgtccactttctgatgaa
gaattggatgctatgttcccagaagggtataaggtccttcctcctccagctggttatgtt
cctattcgaactccagctcgaaagctgacagctacacccacacctttgggtggtatgact
ggtttccacatgcaaactgaagatagaactatgaaaagtgttaatgaccagccttctgga
aatcttccatttttaaaacctgatgatatccagtactttgataaattattggttgatgtt
gatgaatcaacacttagtccagaagaacagaaagagagaaaaataatgaagttgctttta
aaaattaagaatggaacaccaccaatgagaaaggctgcattgcgtcagattactgataaa
gctcgagaatttggagctggtcctttgtttaatcagattctgcctctactaatgtctcct
acacttgaggatcaagagcgtcatttacttgtgaaagttattgatagaatactgtacaaa
cttgatgacttagttcggccatatgtgcacaagatccttgtagtcattgaaccactcttg
attgatgaagattactatgctcgagtggaaggccgagagattatttctaatttagcaaag
gctgctggtctggctactatgatctctaccatgagacctgatatagataatatggatgaa
tatgtccgtaacacaacagctagagcttttttgtatgagtatttgggtgaagagtacccc
gaagtgttgggcagcattcttggagcactgaaggccattgtgaatgtaataggtatgcat
aagatgaccccaccaattaaagatctactgcctagactcacgcccatcttaaagaatagg
catgaaaaagtacaagagaatatttgctttgagcttttagagctcttaaaagctcacaaa
aaagctattcgcagagcaacagtcaacacatttggttatatcgcaaaggccattggccct
catgatgtattggctacacttttaaacaacctcaaagttcaggaaagacagaacagagtt
tgtaccactgtagcaatagctattgttgcagaaatgtgttcacctttcacagtactccct
gctttaatgaatgagtacagagttcctgaactgaatgttcaaaatggagtgttaaagtca
ctttccttcttgtttgagtatattggtgaaatgggaaaggactacatttatgctgtaaca
cctttacttgaagatgctttaatggacagtatagttgttaatgtttgtgacctacagtta
gacatgatgtcctatgtactaggtctgtttcacccagcccggaaagtcagagatgtatac
tggaagatttacaattccatctacattggttcccaggacgctctcatagcacattaccca
agaatctacaatgatgataagaacacctatattcgttacgaacttgactatatcttataa
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integrated database retrieval system