KEGG   Otolemur garnettii (small-eared galago): 100942101
Entry
100942101         CDS       T07855                                 
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100942101 (SF3B1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oga03041]
    100942101 (SF3B1)
   03036 Chromosome and associated proteins [BR:oga03036]
    100942101 (SF3B1)
Spliceosome [BR:oga03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100942101 (SF3B1)
 Complex B
    100942101 (SF3B1)
 Complex C
   U2 SnRNP specific factors
    100942101 (SF3B1)
Chromosome and associated proteins [BR:oga03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    100942101 (SF3B1)
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT HEAT_EZ Htt_N-HEAT_1
Other DBs
NCBI-GeneID: 100942101
NCBI-ProteinID: XP_023372657
LinkDB
Position
Unknown
AA seq 819 aa
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSCASQHKGHSEPDGSFPQIYCTLV
LLLFFSAGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVVNGAAASQ
PPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGATPGS
KIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTERDTPGHGSGWA
ETPRTDRGGDSIGETPTPGAIQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYV
PIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDV
DESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSP
TLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAK
AAGLATMISTMRPDIDNMDEYVRNTTARAFLYEYLGEEYPEVLGSILGALKAIVNVIGMH
KMTPPIKDLLPRLTPILKNRHEKVQENICFELLELLKAHKKAIRRATVNTFGYIAKAIGP
HDVLATLLNNLKVQERQNRVCTTVAIAIVAEMCSPFTVLPALMNEYRVPELNVQNGVLKS
LSFLFEYIGEMGKDYIYAVTPLLEDALMDSIVVNVCDLQLDMMSYVLGLFHPARKVRDVY
WKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq 2460 nt   +upstreamnt  +downstreamnt
atggcgaagatcgccaagactcacgaagatattgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgac
caggaaatttatggtggaagtgacagcagatttgctggatacgtgacatcaattgcagca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgcttggtcagaag
aagccaggatatcatgcccccgtggcattgcttaatgatataccacagtcatgtgcaagt
cagcacaaggggcatagtgagcctgatggaagctttcctcagatttattgtactcttgtc
ctgttgctgttcttttctgcaggagggaagacacctgatcctaaaatgaatgctaggact
tacatggatgtaatgcgagaacagcatttgactaaagaagaacgagaaattaggcaacag
ctagcagaaaaagctaaagctggagaactaaaagtcgtcaatggagcagcagcgtcccag
cctccgtcaaaacgaaaacggcgttgggatcaaacagccgatcagactcctggtgccact
cccaaaaagctgtcaagttgggatcaggcagagacccctgggcataccccttccttacga
tgggatgagacaccaggtcgtgcaaagggaagcgagactcctggagcaactccaggctca
aaaatatgggatcctacaccaagccacacaccagcaggagctgctactccgggacgaggc
gatacacctggtcatgctacaccaggccatggaggtgcaacatccagtgctcgtaaaaac
agatgggatgagacccccaaaactgaaagagatactcctgggcatggaagtggatgggct
gagactcctcgaacagatagaggtggtgattcgattggtgaaacgccgactcctggagcc
attcaggcttggcgatgggaaagagaaattgatgagagaaatcgtccactttctgatgaa
gaattggatgctatgttcccagaagggtataaggtccttcctcctccagctggttatgtt
cctattcgaactccagctcgaaagctgacagctacacccacacctttgggtggtatgact
ggtttccacatgcaaactgaagatagaactatgaaaagtgttaatgaccagccttctgga
aatcttccatttttaaaacctgatgatatccagtactttgataaattattggttgatgtt
gatgaatcaacacttagtccagaagaacagaaagagagaaaaataatgaagttgctttta
aaaattaagaatggaacaccaccaatgagaaaggctgcattgcgtcagattactgataaa
gctcgagaatttggagctggtcctttgtttaatcagattctgcctctactaatgtctcct
acacttgaggatcaagagcgtcatttacttgtgaaagttattgatagaatactgtacaaa
cttgatgacttagttcggccatatgtgcacaagatccttgtagtcattgaaccactcttg
attgatgaagattactatgctcgagtggaaggccgagagattatttctaatttagcaaag
gctgctggtctggctactatgatctctaccatgagacctgatatagataatatggatgaa
tatgtccgtaacacaacagctagagcttttttgtatgagtatttgggtgaagagtacccc
gaagtgttgggcagcattcttggagcactgaaggccattgtgaatgtaataggtatgcat
aagatgaccccaccaattaaagatctactgcctagactcacgcccatcttaaagaatagg
catgaaaaagtacaagagaatatttgctttgagcttttagagctcttaaaagctcacaaa
aaagctattcgcagagcaacagtcaacacatttggttatatcgcaaaggccattggccct
catgatgtattggctacacttttaaacaacctcaaagttcaggaaagacagaacagagtt
tgtaccactgtagcaatagctattgttgcagaaatgtgttcacctttcacagtactccct
gctttaatgaatgagtacagagttcctgaactgaatgttcaaaatggagtgttaaagtca
ctttccttcttgtttgagtatattggtgaaatgggaaaggactacatttatgctgtaaca
cctttacttgaagatgctttaatggacagtatagttgttaatgtttgtgacctacagtta
gacatgatgtcctatgtactaggtctgtttcacccagcccggaaagtcagagatgtatac
tggaagatttacaattccatctacattggttcccaggacgctctcatagcacattaccca
agaatctacaatgatgataagaacacctatattcgttacgaacttgactatatcttataa

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