Otolemur garnettii (small-eared galago): 100942247
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Entry
100942247 CDS
T07855
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
100942247 (TRPA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oga04040
]
100942247 (TRPA1)
Ion channels [BR:
oga04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100942247 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
PKD_channel
Acetate_kinase
DUF7694
Motif
Other DBs
NCBI-GeneID:
100942247
NCBI-ProteinID:
XP_012666997
Ensembl:
ENSOGAG00000011209
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MKRSLKKMLRPGEKKESQGVVYQGVQVDMDDSKESLKVVFEGSSCRIRSFIKRQKSISGK
NERNSSPLHHAAAEGEVEMMEMIIKDSSCEVLNSMDDYGNTPLHWAAEKNQVESVKFLLS
KGANPNLRNCNMMAALHIAVQAMFNEVVKVLTEHSSININLEGENGNTAVILACTKDNSE
ALQILLNKGANQCKPNKWGCFPVHQAAFSGAKKCMEIILKYGEEHGYSRECHINFVNNGK
ASPLHLAVQSGDLEMIKMCLDNGAHIELVEDGRCMALHFAATQGATEIVKLMISSYSGST
DIVNAVDGNHETLLHRASLFDHHELADYLISVGADVNVIDSEGRSPLILATASASWNIVN
LLLSKGARVDIKDHFGRNFLHLTVQQPYGLNNLRPEFMQMQEIKELVMDEDNDGCTPLHY
ACRQGVPVSVNNLLGFNVSIYSKSKDRKSPLHFAASYGRINTCQRLLQDISDTRLLNEGD
LHGMTPLHLAAKNGHDKVVQLLLKKGALFLSSVMMQAVQEKGCRLIPHCSFLVCFLQKNT
ALHFAARDGHAKAVGLLLSHNADIVLNKKQASFVHLALHNKRKEVVLTAIRSKRWDECLK
VFSHRSPSNRCPITEMIEYLPECMKVSSLKQNSFSIEYNFKYLQCPLEFTQKTKPSQAAA
YEPLTALNAMVQHNRIELLNHPVCKEYLLMKWMAYGFRAHMMNLGSYCLGLIPMTLLVVS
IKPGMAFNSTAIINETSNYSEILDSTHSYPIKVCMILVFLSSLFGYCKEVVQIFQQKRNY
LSDFNNIIEWIIYTTSIIFVLPLFIDIPAHVQWQCGAIAIYFYWMNFLLYLQRFENCGIF
IVMLEVIMRTLLRSTVVFVFLFLAFGLSFYVLLNLQDAFSSPWLSIIQTFSMMLGDVSYQ
DAFLEPFLRNELAYPFVSFALLIAFTIFVPVVLMNLLIGLAVGDIAEVQKHASLKRIAMQ
VELHTSLEKKLPLWFLRKVDQKSTIVYPNKPRSSGRLFHLFYYLFCNHETRQEIPNADTS
LEMEILKQKYRLKDLTFLLEKQHELIKLIIQKMEIISETEDEDNHCSFQDKFKKEQLEQR
CSKWNSVLRAVKAKTQQPEH
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagcctgaagaagatgttgcgcccgggggagaagaaggagtcccaaggcgtg
gtctaccagggcgtgcaggtcgacatggacgactccaaagaatcgctgaaggtggttttt
gaaggaagttcatgtcgaatacgaagctttatcaagaggcaaaagagcataagtggcaag
aatgagaggaattcctcccctctgcatcacgctgccgcagaaggtgaagtggagatgatg
gagatgatcatcaaagattcctcttgtgaagtgctgaactcaatggacgattatggaaat
acccctctgcactgggctgcagaaaaaaaccaggttgaaagcgtgaagtttcttctcagc
aaaggagcgaatccaaaccttcgaaactgcaacatgatggcggcccttcacatcgccgtg
caggccatgtttaatgaggtggtgaaggtcttgactgagcacagcagtattaatattaat
ttggaaggagaaaatggaaacacagctgtgatattggcatgcaccaaagataacagtgaa
gcactgcaaattttgcttaataaaggagctaatcaatgtaaacccaataaatggggctgt
ttccctgttcaccaggctgcattttcaggtgccaaaaagtgcatggaaataatactgaag
tatggtgaagaacatgggtacagcagagagtgtcacattaactttgtgaataatgggaaa
gccagccctctccacctggctgttcaaagcggcgacttggaaatgattaaaatgtgtctg
gacaacggtgcccacatagaactggtagaggatgggaggtgcatggcccttcattttgct
gccacccagggggccactgagattgtcaaactgatgatatcatcctattctggtagcacc
gatattgtaaatgcagttgatggaaatcatgagaccctactgcacagagcctcattgttt
gatcaccacgaactggcagactacttaatttcagtgggtgcagatgttaacgttattgat
tctgaaggacgctctccacttatattagcaactgcttctgcatcttggaatattgtcaat
ttactactctctaaaggtgcccgtgtagacataaaggatcattttggacgtaattttttg
catttgactgtccagcaaccttatggattaaacaatttgcggcctgagtttatgcagatg
caggagattaaagagctggtaatggatgaagacaatgatgggtgcactcctctgcactac
gcgtgcagacagggggtccccgtctctgtaaataacctccttggctttaacgtgtccatt
tattccaaaagcaaggataggaaatcacccctgcattttgcagccagttatgggcgtatc
aatacctgccagaggctcttgcaagacataagcgatacgaggcttttgaacgaaggcgat
cttcatggaatgactccgctccacttggcagcgaaaaatggacacgataaggtagtgcag
cttctcctgaaaaaaggtgcattatttctcagttcagtaatgatgcaggcagttcaggaa
aagggctgcaggctgattcctcactgctcatttcttgtctgctttctccaaaagaacacg
gcgctgcactttgccgcgagggatggccacgccaaagctgtggggctgcttctgagccac
aatgctgacatcgtcctgaacaagaagcaggcctcctttgtgcaccttgcactgcacaat
aagaggaaagaggtggttctgacggccatcaggagcaaaagatgggatgaatgtcttaaa
gtttttagtcaccgttctccaagcaatagatgtccaatcacggaaatgatagaatacctc
cctgaatgcatgaaagtaagctctctaaaacaaaactctttctcgattgaatataatttc
aagtatcttcagtgtccattagaattcacccaaaaaacgaaaccgtctcaagctgctgcc
tacgagcctctcacagccctaaatgcaatggtacaacataaccgcatagagcttctcaat
caccctgtgtgtaaggaatacttacttatgaaatggatggcttatggatttagagcccat
atgatgaacctaggatcttactgtcttggcctcatacctatgactcttcttgttgtcagt
ataaagccgggaatggctttcaactcaactgcaatcatcaatgaaactagcaattattca
gaaatattagacagcacgcattcatatccaataaaagtgtgtatgattttagttttttta
tcaagtttatttgggtactgcaaagaagtggtccaaatttttcaacagaaaaggaattac
ttatcggattttaataatatcattgaatggattatctacacaacaagcatcatttttgtg
ctgcccttgttcattgatataccagctcacgtgcagtggcaatgtggagcaatcgccata
tacttttactggatgaatttcttgttgtatctgcaaagatttgaaaattgtggaattttc
attgttatgttggaggtaattatgagaactttgttgagatctacagtcgtatttgtcttc
ctttttttggcttttggactcagtttttatgtcctcctgaatttacaggatgccttcagc
tccccgtggctgtccatcatacagaccttcagcatgatgctgggagatgtcagttatcaa
gacgccttcctagaaccgtttctgagaaatgagttggcttatccatttgtgtcctttgca
ctactcattgccttcacaatatttgtcccagttgtcctcatgaatttacttattggtctg
gcagttggtgacattgctgaggtccagaaacatgcctcactgaagaggattgccatgcag
gtggaacttcatactagcttagagaagaagctgccgctctggttcctacggaaagtggat
cagaaatcgaccatcgtctatcccaacaagcccaggtctagtgggagattatttcatttg
ttttactatttattttgcaaccatgaaacaagacaagaaataccaaatgctgatacatct
ttggaaatggaaatattaaagcagaaatacaggctgaaggatctcacttttcttctggag
aaacagcatgagctcatcaaactcatcattcagaaaatggagatcatctccgagacagag
gatgaagataaccattgctcttttcaagacaagtttaagaaagagcagttggaacagagg
tgcagcaagtggaattctgtgttaagggcagtcaaggcaaaaacacagcagcctgagcat
tag
DBGET
integrated database retrieval system
