Otolemur garnettii (small-eared galago): 100943707
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Entry
100943707 CDS
T07855
Symbol
NYX
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
oga
Otolemur garnettii (small-eared galago)
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oga00535
]
100943707 (NYX)
Proteoglycans [BR:
oga00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
100943707 (NYX)
BRITE hierarchy
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
100943707
NCBI-ProteinID:
XP_012666908
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MLVLLLHAAVLCLPSTGAARACARSCPAACACSSVERGCSVRCDRAGLPQVPAEFPCEAV
SIDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELRLAYNGDLRY
LHARTFVALGRLRRLDLAACRLFSVPERLLAELPALRELSAFDNLFRRVPGALRGLANLT
HAHLERSRIEAVASSSLQGLRRLRSLSLQANRVRAVHAGAFSDCGLLEHLLLNDNLLAEL
PADAFRGLRRLRTLNLGGNALGHVASAWFTDLAELELLYLDRNSIAFVEEGAFQNLSGLL
ALHLNSNHLSVLAWAAFQPGFFLGRLFLFRNPWCCDCRLEWLQDWMEGSGRVTDVPCASP
GSVAGLDLSHVSFGRSSDGLCVDPEELNFTVSSPGPSSEPEVTTMSRFSSLLSKLLAPRA
PVEEVANTTGELANASLPRGLPSSGMGGLGCKSTILLASCFLLHVAHTEY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgctggttctgcttctgcatgcggcggtcctctgcctgcccagcaccggggctgcgaga
gcctgcgcgcgctcctgcccagccgcctgcgcctgtagcagtgtggagcgcggctgctcg
gtgcgctgtgaccgcgccggcctcccacaggtgcccgccgagttcccgtgtgaggcggtg
tccatcgacctggaccggaatggactgcgcttcctgggtgagcgggccttcggcacgctg
ccgtcgctgcgtcgcctgtcgctgcgccacaacaacctatctttcatcacgcccggagcc
ttcaagggcctgccgcgcctggccgagctgcgcctggcgtacaatggcgacctgcgctac
ctgcacgcacgcaccttcgtggcgctcggccgcctgcgccgcctcgacctggctgcctgc
cgcctcttcagcgtgcccgagcgcctgctggccgagcttccggccctgcgcgagctctcc
gccttcgacaatttgttccgccgagtgccgggcgcgctgcgcggcctggccaacctgacg
cacgcgcacctggagcgcagccgcattgaggcggtggcctccagctcgttgcagggcttg
cggcgcctgcgctcgctcagcctgcaggccaaccgcgtccgcgcggtgcacgccggcgcc
ttcagcgactgcggcctcctggagcacctgctgctcaatgacaacttgctggccgagttg
ccggccgacgccttccgcggcctgcgccgcctgcgcactctcaacctgggcggcaacgcg
ctgggccacgtggcgagcgcctggtttaccgacctggccgagctcgagctgctctacctg
gaccgcaacagcatcgccttcgtggaggagggtgccttccagaacctctcaggcctcctc
gctttgcacctcaatagcaaccacctctctgtgctcgcctgggccgctttccagcccggc
ttctttctgggccgcctcttcctcttccgcaacccctggtgctgcgactgccgcctagag
tggctgcaggactggatggagggctccgggcgtgtcaccgacgtgccgtgtgcctccccg
ggctctgtggcaggcctggacctcagccacgtctcctttgggcgctcctctgatggcctc
tgtgtggaccccgaggagctgaacttcactgtgtccagtccaggcccatcctcagagcca
gaggttaccaccatgagcaggttcagcagcctcctttccaagctgttggctccaagggcc
cctgtggaggaggtggccaacaccactggggagctggccaatgcctccctgccccgtggc
ctgccttccagtgggatgggaggcttgggctgcaagtccacgattctcctggcctcttgt
tttctgctccatgtggcccacacggagtattag
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