Otolemur garnettii (small-eared galago): 100944093
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Entry
100944093 CDS
T07855
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100944093 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oga03021
]
100944093 (SF3B3)
03041 Spliceosome [BR:
oga03041
]
100944093 (SF3B3)
03036 Chromosome and associated proteins [BR:
oga03036
]
100944093 (SF3B3)
Transcription machinery [BR:
oga03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100944093 (SF3B3)
Spliceosome [BR:
oga03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
100944093 (SF3B3)
Complex B
100944093 (SF3B3)
Complex C
U2 SnRNP specific factors
100944093 (SF3B3)
Chromosome and associated proteins [BR:
oga03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
100944093 (SF3B3)
TFTC complex
100944093 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
100944093
NCBI-ProteinID:
XP_012661604
Ensembl:
ENSOGAG00000016051
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGSGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
EEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacttgactttgcagcgagccactggcatcagctttgccattcatggc
aacttttctggaaccaaacaacaggaaattgttgtttctcgtggaaagatcttggagctg
cttcgcccagaccccaacactggcaaagtacatacccttctcactgtggaagtatttggt
gttatccggtcactcatggcctttagattgacaggtggcaccaaagactacattgtagta
ggcagtgactctggtcgaattgttatcttggaataccagccatccaagaatatgtttgag
aaaattcaccaagaaacctttggcaagagtggatgtcgccgtattgttcctggccagttc
ttagctgtggatcccaaaggccgtgctgttatgattagtgccattgagaaacagaaattg
gtgtatatcttgaacagagatgctgcagcccgacttaccatttcatctcccttggaagcc
cacaaagcaaacactttagtatatcatgtagttggagtagatgtgggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagataatgatcccacaggggaagca
gcagctaatacccagcagacacttactttctatgagctagaccttggtttaaatcacgtg
gtccgaaaatatagtgaacctttggaagaacatggcaacttccttattacagttccggga
gggtcagatggtccaagtggagtgctgatctgctctgaaaactatattacttacaaaaac
tttggtgaccaaccagatatccgctgtccaattcctaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtctgctctgccacccataagaccaaatcaatgttcttc
tttttggcccaaacggagcagggagatatcttcaagatcacattggagacagatgaagat
atggttacagagatccggctcaaatattttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttcctttttgtagcatcagaatttggaaatcattacttatatcag
attgcacatcttggagatgatgatgaagaacctgagttctcatctgccatgcctctggaa
gaaggagatacatttttctttcagccaagaccactcaaaaaccttgtgctggttgatgag
ttggatagcctttcacctattctgttctgccagatagctgatctggccaatgaagatact
ccacagctgtatgtggcctgtggtaggggacccaggtcatctctgagagtcctgagacat
ggacttgaggtatcggaaatggctgtttctgagctacctggtaaccccaatgctgtctgg
acagtgcgtcgacacattgaagatgaatttgatgcctacatcattgtgtctttcgtgaat
gccacccttgtattatccattggagagactgtggaagaagtgactgactctgggttcctg
ggcaccaccccgaccttgtcctgctccctgttaggagacgatgccttggtgcaggtgtat
ccagatggcattcgtcacatacgagcagataagagagtcaatgagtggaagacacccgga
aagaaaacaattgtgaagtgtgcagtgaaccagcggcaagtggtgattgccctgacagga
ggagagctggtctactttgagatggatccctcagggcagctgaatgaatacacagagcgg
aaagagatgtcagcagatgtggtgtgcatgagtctggccaatgtgccccctggagagcag
cgatctcgcttcctggctgtggggctggtggacaacactgttagaatcatctctctggat
ccctcagactgtttgcaacctctgagcatgcaggctcttccagcccagcctgagtcctta
tgtattgtggaaatgggtgggactgagaagcaggatgaactgggtgagaggggctcaatc
ggcttcctttacctgaatattgggttacagaatggtgtgctgctgaggacagttctggac
cctgtcactggagatctgtctgacacccgcactcgatacctggggtcccgtcctgtgaaa
ctcttccgtgtccgcatgcaaggccaggaggcggtattggccatgtcaagccgctcatgg
ttgagctattcttaccaatctcgcttccatctcacccctctgtcttacgagaccctggaa
tttgcatctggttttgcctcggaacagtgtcctgagggcattgtagctatctccactaac
accttgaggattttggctttggagaagctaggtgctgtcttcaatcaagtagcctttcca
ctgcagtacacacccaggaaatttgtcatccatcctgagagtaacaaccttatcatcatt
gaaacagaccacaatgcctacactgaggccacaaaagctcagagaaagcagcagatggca
gaggaaatggtggaagcggcaggagaggatgagcgggagctggctgcagagatggcagca
gcattcctcaatgaaaaccttcctgaatccatttttggagctcccaaggctggcagtggg
cagtgggcctctgtgatacgtgtgatgaatcctattcaggggaacacgctggaccttgtc
cagctggagcagaatgaggcagcttttagtgtggccgtgtgcaggttctccaacactggt
gaagagtggtatgtgctggtaggcgtggccaaggacctgatactgaacccccgatctgtg
gcagggggttttgtctatacgtacaagcttgtgaacaatggggaaaaactggagtttttg
cacaagactccagtggaagaggtccctgctgccattgccccattccaggggagggtgttg
attggtgtgggaaagcttctgcgtgtctatgacttggggaagaagaagttactccgaaag
tgtgagaataagcatattgccaattatatctctgggatccagactatcgggcacagggta
attgtctctgacgtacaagaaagtttcatttgggttcgctacaagcggaatgagaaccag
ctcatcatctttgctgatgacacctacccccgatgggtcactacagccagcctcctcgac
tatgacactgtggctggggcagacaagtttggaaacatatgtgtggtgaggctcccacct
aacaccaatgatgaagtggatgaggatccgacaggaaacaaagccctgtgggaccgaggc
ttactcaatggggcctcacagaaggcagaggtgatcatgaactatcacgttggggagaca
gtgctatcgttacagaagaccacgttgatccctggaggctccgagtcacttgtttatacc
accttgtccggaggaattggcatccttgtcccattcacatcccacgaggaccacgacttc
tttcaacatgtagaaatgcatctaagatctgagcatccccctctctgtggacgagaccat
ctcagttttcgctcatattatttccctgttaagaatgtgattgatggagacctctgtgaa
cagtttaactccatggagcccaacaaacagaagaatgtctctgaagaactggaccgaacc
ccacctgaagtgtccaagaagctcgaagatatacggacccgttatgccttctga
DBGET
integrated database retrieval system