Otolemur garnettii (small-eared galago): 100945287
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Entry
100945287 CDS
T07855
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03013
Nucleocytoplasmic transport
oga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100945287 (UPF3B)
03015 mRNA surveillance pathway
100945287 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100945287 (UPF3B)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100945287 (UPF3B)
mRNA cycle factors
P-body specific factors
100945287 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
100945287
NCBI-ProteinID:
XP_003797053
Ensembl:
ENSOGAG00000004643
UniProt:
H0WQC7
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MKEEKEHRPKEKRVTLLTPPGASCSGSGTSGDSAKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFRNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYATDNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPEREKIKDEPKIKLLKKPEKGDEKELDKREKTKKLDKENLNDER
ASGQSCTLPKRSDSELKDEKPKRLEEESGRDYRERERDYEREQERILRERERLKRQEEER
RRQKERYEKERIFKRKEEEMKKEKEALRDKGKKNESTESIGSSDKTEKKEEVVKRDRIRN
KDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAIEKKQESGISHRKEGGEE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagagaaggagcacaggcctaaggagaagcgagtaaccctgttaacgcccccc
ggggcctcatgcagcggcagtgggacctcaggggacagcgccaaaggagaagataagcag
gatcgaaacaaggagaagaaagaggctctgagcaaggtggtaattcgaagattacctccc
actttgaccaaggagcagcttcaggaacatcttcaacctatgcctgaacatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttagaaaccaagaagacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aagaagaagactaagaaaagagataccaaagttgggactatcgatgatgatccagaatat
agaaaatttttggaaagttatgccacagataatgagaagatgacatctactccagagacg
ctgctagaggaaatagaagcaaaaaatagagaactaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaagaaagaaggagg
cgagaaatagaaagaaaaagacaaagagaagaagagaggagaaaatggaaagaagaggag
aaacggaaaaggaaagatatagaaaagctaaagaagattgacagagttccagaaagggaa
aaaataaaggatgaaccaaagattaagctgctcaagaagccagaaaaaggagatgaaaaa
gagttggacaaaagagaaaaaaccaagaaattggacaaagagaatctgaatgatgaaaga
gccagtgggcaaagttgtacattgcccaagcgatctgatagtgaacttaaagatgaaaag
ccaaagagacttgaagaggagagtggcagagactacagggagagagaacgggattatgaa
cgtgagcaggagcgcatacttcgagaaagagagaggctgaagcggcaagaagaagagcgc
cgtaggcagaaggaacgttatgagaaagagaggatttttaaaagaaaagaagaagaaatg
aaaaaagagaaagaagcacttcgggataaaggaaagaagaatgaaagtacagaatcaata
ggcagctcagacaaaacggaaaagaaagaggaagtggttaagagagatcgaataagaaat
aaggatcgcccagcaatgcagctttaccaaccaggagctcgaagccgaaatcgactctgt
cctcctgatgacagcaccaagtctggagattcagcaatagaaaaaaagcaagaaagtggt
attagccatagaaaagaaggaggagaagagtga
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