Otolemur garnettii (small-eared galago): 100945340
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Entry
100945340 CDS
T07855
Symbol
RC3H1
Name
(RefSeq) roquin-1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
oga
Otolemur garnettii (small-eared galago)
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oga03000
]
100945340 (RC3H1)
04121 Ubiquitin system [BR:
oga04121
]
100945340 (RC3H1)
Transcription factors [BR:
oga03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100945340 (RC3H1)
Ubiquitin system [BR:
oga04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100945340 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
100945340
NCBI-ProteinID:
XP_023366581
Ensembl:
ENSOGAG00000004044
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKISIIWSLGKLMFIFFKLQTPASFAQSVQELTIALQRTGDPANLN
RLRPHLELLANIDPSPGFLSPPQHSKYKTYMCRDMKQRGGCPRGASCTFAHSQEELEKFR
KMNKRLVPRRPLSASLGQLNEVGLPSTAILPDEGTVDLPSRKPPALPNGIVSAGNTVTQL
IPRGTDPSYDSTLKPGKIDHLSSSAPGSPPDLLESVPKSISALPVNPHPVPPRGPTELPA
MPVTKPLQMVPRGSQLYPAQPADVYYQDPRGAAPPFEPAPYQQGMYYTPPPQCVSRFVRP
PPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQQYPPMYPPHYDGRRVYPAQSYTREEIF
RESPIPIEIPPAAVPSYVPESRERFQQIEGYYPVAPHPPQIRPSYLREPTYSRLPPPPQP
HPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPPTFHQEEFLDEDLKVAGKYKGNDY
SQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEMMNVESKGMRDQRLDLQRRATETSDDDL
IPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMAPQGAPTKSINISDYSPYGTHGGWGGSP
YSPHHSIPSQGHFSERERISMSEVASHGKPLPSAEREQLRLELQQLNHQISQQTQLRGLE
AVSNRLVLQREANTLAGQPQPPPPPPKWPGMISSEQLSLELHQVEREIGKRTRELSMESQ
CSLDMKSKLNTSKQAENGQPEPQNKVPAEDLTLTFSDVPNGSALTQENISLLSNKTSSLN
LSEDPEGRGDNNDSQKSGVTPSSAP
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctctcctgcccaatttgcactcagact
ttcgacgaaacgattcgaaagcccatcagtttgggctgtggccatactgtctgcaagatg
tgcctaaataaactccatcgcaaggcttgcccttttgaccagaccactatcaatacagac
attgagctcctccccgtaaactcagcattgctgcagctagtgggtgctcaggtccctgag
cagcaacctattactttgtgtagtggagttgaagacacaaagcattatgaggaagccaag
aaatgtgtagaagaattagcattgtacctgaaaccactcagcagtgctagaggagtgggt
ttgaatagcactactcagagtgttctgagtcgcccaatgcagaggaagcttgtgactctg
gtccactgtcaactagtggaagaagaaggccggattcgtgccatgagggcagctcgctcg
ttaggtgaacgaacagttacagagctcattctccagcaccagaatcctcaacaactctct
tccaatctttgggcagcagtcagggctaggggctgccagtttcttggaccagcaatgcag
gaagaagctctaaagctggttctactggccttagaagatggttcagctttgtcaagaaaa
gtattggttctctttgtggtgcaaaggttggagccccggtttcctcaagcctctaaaact
agcattgggcatgttgttcaactcctttatagagcctcctgcttcaagataagtattatc
tggtctttgggaaagttaatgtttatcttttttaagttgcagaccccagcctcttttgca
cagagtgttcaggaactaacaattgctctccagcggactggagacccagcaaacttgaac
cgactaagaccccatttggagctattagcaaacattgaccctagtccaggatttctcagt
cctccacagcatagcaaatataaaacatacatgtgtcgagatatgaagcagagaggagga
tgccctcgtggggccagctgtacatttgcgcattcacaggaggaactggaaaaatttcgt
aagatgaacaagcgcctggttcccagaagacccctgagtgcctctttgggtcagcttaat
gaggtgggcctgccctcaacagctatccttccagatgaaggtacagtggatctgcctagt
agaaaacctcctgctctgccaaatggaattgtatcagcagggaatacagtaacacagctt
attccgcgagggacggaccccagctatgattctactctgaaaccaggaaagatagatcat
ctgagcagtagtgctcctggatcccctcctgacttgctagaatctgtccctaagagtatt
tctgccttacctgtgaatccacatcctgtacctccaagggggccaacagagctgcctgcc
atgcctgtcaccaaaccacttcagatggtcccacgaggttctcagttatatccagcacag
ccggcagatgtttattatcaggatcctcgaggagctgctccaccatttgaaccagcacct
tatcagcagggtatgtactatactccaccaccacagtgtgtgtcccgctttgtccgacct
ccaccatctgctcctgaacctggtcctccatacttggatcattatccgccctacctccaa
gatcgcgtagtaaactctcagtatggcacacagccacaacagtacccccctatgtaccca
cctcactatgatggccggcgagtataccctgctcagtcttatacgagagaagagatattc
cgagaaagccctatacccattgagattccacctgcagcagttccatcctatgtaccagaa
tccagagaaagattccaacagattgagggttactatccagtggctcctcatccacctcag
atccgaccttcgtacctcagagagcctacttacagccggcttcctcctcctccccagccc
catcctagtctagatgaactacatcgccgacgaaaggaaataatggcccaactagaggaa
agaaaggttatctctccccctccttttgcaccttcaccaacattgcctcctaccttccat
caagaggaatttttggatgaagacttgaaggtagctgggaaatacaaagggaatgattat
agccagtactctccatggtcatgtgacaccatcggctcctacattggaaccaaagatgca
aaaccaaaagatgttgtggcagcagggagtgtggaaatgatgaatgtggagagtaaggga
atgagagaccagcgattggatctgcagagaagagcgacagaaaccagtgacgatgacctt
atcccgtttggagaccgaccaacagtgtctcggtttggtgccatctctcgaacttccaaa
acgatatatcagggtgctggcccaatgcaggctatggcacctcagggagctcccacaaaa
tctattaacatttcagattatagtccatatggaacccatggtggctggggaggttctcca
tattcacctcatcatagcataccttctcagggacacttcagtgagagggagagaatatcc
atgtctgaagtggccagtcatggaaaaccccttccatctgctgagagggagcagctgcga
ctagaattacagcaactgaaccatcagattagtcagcagacccagctgcgtggactagag
gctgttagtaacaggctggtgttgcagagggaggcaaacaccctggcaggccagccacag
cctccaccaccacctccaaaatggcctggaatgatctcaagtgagcagttgagcttggaa
ctgcaccaggtggaaagggaaattgggaagagaacccgagagctgagtatggagagccag
tgttctctggacatgaaaagcaaactgaatacaagtaagcaagcagagaatggacaacca
gaaccacaaaacaaagttccagctgaggaccttacattgacattcagtgatgtaccgaat
ggatcagccttgacacaagagaatatcagcctcctatcaaacaagaccagctctctgaac
ctgtcggaggacccggagggaagaggagataacaatgactcccagaaatcaggagttact
cccagttctgctccctaa
DBGET
integrated database retrieval system
